KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:40:01 2014 Check: 00 .. Name: ENSBTAP00000030100/1-395 Len: 484 Check: 3161 Weight: 1.00 Name: bmy_10872T0/1-312 Len: 484 Check: 8576 Weight: 1.00 Name: BACU005333/1-395 Len: 484 Check: 4136 Weight: 1.00 Name: ENSP00000411827/1-475 Len: 484 Check: 7206 Weight: 1.00 Name: ENSTTRP00000009759/1-414 Len: 484 Check: 3482 Weight: 1.00 // 1 50 ENSBTAP00000030100/1-395 ---------- ---------- ---------- ---------- ---------- bmy_10872T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU005333/1-395 ---------- ---------- ---------- ---------- ---------- ENSP00000411827/1-475 MLWAVRTRCY VVKAQLGPTV ALEGRAPRAP GPSCLGNGNC QRPGPITSRN ENSTTRP00000009759/1-414 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000030100/1-395 --------ME SNLSGLVPAA GLVPALPPAV TLGLTAAYTT LYALLFFSVY bmy_10872T0/1-312 --------ME SNLSGLVPAA GLVPALPPAV TLGLTAAYTT LYALLFFSVY BACU005333/1-395 --------ME SNLSGLVPAA GLVPALPPAV TLGLTAAYTT LYALLFFSVY ENSP00000411827/1-475 VTRASLPDME SNLSGLVPAA GLVPALPPAV TLGLTAAYTT LYALLFFSVY ENSTTRP00000009759/1-414 --------ME SNLSGLVPAA GLVPALPPAV TLGLTAAYTT LYALLFFSVY 101 150 ENSBTAP00000030100/1-395 AQLWLVLLYG HKRLSYQTVF LALCLLWAAL RTTLFSFYFR DTPRANHLGP bmy_10872T0/1-312 AQLWLVLLYG HKRLSYQTVF LALCLLWAAL RTTLFSFYFR DTPRANRLGP BACU005333/1-395 AQLWLVLLYG HKRLSYQTVF LALCLLWAAL RTTLFSFYFR DTPRANRLGP ENSP00000411827/1-475 AQLWLVLLYG HKRLSYQTVF LALCLLWAAL RTTLFSFYFR DTPRANRLGP ENSTTRP00000009759/1-414 AQLWLVLLYG HKRLSYQTVF LALCLLWAAL RTTLFSFYFR DTPRANRLGP 151 200 ENSBTAP00000030100/1-395 LPFWLLYCCP VCLQFFTLTL MNLYFAQVVF KAKAKRRPEM SRGLLAVRGA bmy_10872T0/1-312 LPFWLLYCCP VCLQFFTLTL MNLYFAQ--- ---------- ---------- BACU005333/1-395 LPFWLLYCCP VCLQFFTLTL MNLYFAQVVF KAKAKRRPEM SRGLLAVRGA ENSP00000411827/1-475 LPFWLLYCCP VCLQFFTLTL MNLYFAQVVF KAKVKRRPEM SRGLLAVRGA ENSTTRP00000009759/1-414 LPFWLLYCCP VCLQFFTLTL MNLYFAQVVF KAKAKRRPEM SRGLLAVRGA 201 250 ENSBTAP00000030100/1-395 FVGASLLFLL VNVLCAMLSR RRRAQPWALL LVRVLVSDSL FVICALSLAA bmy_10872T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU005333/1-395 FVGASLLFLL VNVLCAVLSR RRRAQPWALL LVRVLVSDSL FVICALSLAA ENSP00000411827/1-475 FVGASLLFLL VNVLCAVLSH RRRAQPWALL LVRVLVSDSL FVICALSLAA ENSTTRP00000009759/1-414 FVGASLLFLL VNVLCAVLSR RRRAQPWALL LVRVLVSDSL FVICALSLAA 251 300 ENSBTAP00000030100/1-395 CLCLVARRAP STSIYLEAKG TSVCQAAAMG GAMVLLYASR ACYNLAALAL bmy_10872T0/1-312 ---------- ---------G TSVCQAAAMG GAMVLLYASR ACYNLAALAL BACU005333/1-395 CLCLVARRAP STSIYLEAKG TSVCQAAAMG GAMVLLYASR ACYNLAALAL ENSP00000411827/1-475 CLCLVARRAP STSIYLEAKG TSVCQAAAMG GAMVLLYASR ACYNLTALAL ENSTTRP00000009759/1-414 CLCLVARRAP STSIYLEAKG TSVCQAAAMG GAMVLLYASR ACYNLAALAL 301 350 ENSBTAP00000030100/1-395 APRSRLDAFD YDWYNVSD-- -------QAD LVNDLGNKGY LVFGLILFVW bmy_10872T0/1-312 APRSRLDAFD YDWYNVSDQV GTAPTSPQAD LVNDLGNKGY LVFGLILFVW BACU005333/1-395 APRSRLDAFD YDWYNVSD-- -------QAD LVNDLGNKGY LVFGLILFVW ENSP00000411827/1-475 APQSRLDTFD YDWYNVSD-- -------QAD LVNDLGNKGY LVFGLILFVW ENSTTRP00000009759/1-414 APRSRLDAFD YDWYNVSD-- -------QAD LVNDLGNKGY LVFGLILFVW 351 400 ENSBTAP00000030100/1-395 ELLPTTLLVG FFRVHRPPQD LSTSRILNGQ VFGSRSYFFD RA-HCEDEGC bmy_10872T0/1-312 ELLPTTLLVG FFRVHRPPQD LSTSRILNGQ VFGSRSYFFD RA-HCEDEGC BACU005333/1-395 ELLPTTLLVG FFRVHRPPQD LSTSRILNGQ VFGSRSYFFD RA-HCEDEGC ENSP00000411827/1-475 ELLPTTLLVG FFRVHRPPQD LSTSHILNGQ VFASRSYFFD RAGHCEDEGC ENSTTRP00000009759/1-414 ELLPTTLLVG FFRVHRPPQD LSTSRILNGQ VFGSRSYFFD RA-HCEDEGC 401 450 ENSBTAP00000030100/1-395 SWEHSRGEST SMSGSLGSSS WYG-TIGREP -----GWCGG SQTRTTPL-- bmy_10872T0/1-312 SWEHSRGEST SMSGSLGSSS WYG-AIGREP -----GWCGG SQTRTTPL-- BACU005333/1-395 SWEHSRGEST SMSGSLGSSS WYG-AIGREP -----GWCGG SQTRTTPL-- ENSP00000411827/1-475 SWEHSRGEST RCQDQAATTT VSTPPHRRDP PPSPTEYPGP SPPHPRPLCQ ENSTTRP00000009759/1-414 SWEHSRGEST RFWDQAATIT VSTLPHRRDP PSSPVEHPDP SPSHPRPLCQ 451 500 ENSBTAP00000030100/1-395 LFSQVLG--P GGHHHSL-YS TPQT------ ---- bmy_10872T0/1-312 LFSQVLG--P GSHHHSL-YS TPQT------ ---- BACU005333/1-395 LFSQVLG--P GSHHHSL-YS TPQT------ ---- ENSP00000411827/1-475 VCLPLLAQDP GGRGYPLLWP APCCSCHSEL VPSP ENSTTRP00000009759/1-414 VHLPLLARDP GGCGCP--RP APCYSCCSEL VLSE