KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:40:02 2014 Check: 00 .. Name: ENSP00000322229/1-501 Len: 514 Check: 799 Weight: 1.00 Name: ENSBTAP00000030131/1-445 Len: 514 Check: 3904 Weight: 1.00 Name: ENSTTRP00000016540/1-441 Len: 514 Check: 8567 Weight: 1.00 Name: bmy_17467T0/1-448 Len: 514 Check: 4600 Weight: 1.00 Name: BACU005389/1-440 Len: 514 Check: 3883 Weight: 1.00 // 1 50 ENSP00000322229/1-501 MGTRAARPAG LPCGAENPAR RRLALGARQQ IHSWSPRTPS TRLTAPAGPA ENSBTAP00000030131/1-445 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016540/1-441 ---------- ---------- ---------- ---------- ---------- bmy_17467T0/1-448 ---------- ---------- ---------- ---------- ---------- BACU005389/1-440 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000322229/1-501 RGVARPAMAP DPVAAETAAQ GPTPRYFTWD EVAQRSGCE- ERWLVIDRKV ENSBTAP00000030131/1-445 -------CCP APMAPETPAQ GPTPRYFTWD EVAQRSGREK ERWLVIDRKV ENSTTRP00000016540/1-441 ---------- DPMAPETPAQ GPIPRYF-WD EVAQRSGRDK ERWLVIDRKV bmy_17467T0/1-448 ---------- --MAPETPAQ GPTPRYFTWD EVAQRSGRDK ERWLVIDRKV BACU005389/1-440 ---------- ---------- GPTPRYFTWD EVAQRSGRDK ERWLVIDRKV 101 150 ENSP00000322229/1-501 YNISEFTRRH PGGSRVISHY AGQDATDPFV AFHINKGLVK KYMNSLLIGE ENSBTAP00000030131/1-445 YNISEFVRRH PGGSRVISHY AGQDATDPFV AFHINKGLVR KYMNSLLIGE ENSTTRP00000016540/1-441 YNISEFTRQH PGGSRVISHY AGQDATDPFV AFHINKGLVR KYMNSLLIGE bmy_17467T0/1-448 YNISEFTRQH PGGSRVISHY AGQDATDPFV AFHINKGLVR KYMNSLLIGE BACU005389/1-440 YNISEFTRQH PGGSRVISHY AGQDATDPFV AFHINKGLVR KYMNSLLIGE 151 200 ENSP00000322229/1-501 LSPEQPSFEP TKNKELTDEF RELRATVERM GLMKANHVFF LLYLLHILLL ENSBTAP00000030131/1-445 LSPEQPSFEP TKNKELIHEF RELRATVERM GLMKANPVFF LLYLLHILLL ENSTTRP00000016540/1-441 LSPEQPSFEP TKNKELTEEF RALQATVERM GLMKANPVFF LLYLLHILLL bmy_17467T0/1-448 LSPEQPSFEP TKNKELTEEF RELQATVERM GLMKANPVFF LLHLLHILLL BACU005389/1-440 LSPEQPSFEP TKNKELTEEF RELQATVERM GLMKANPVFF LLHLLHILLL 201 250 ENSP00000322229/1-501 DGAAWLTLWV FGTSFLPFLL CAVLLSAVQA QAGWLQHDFG HLSVFSTSKW ENSBTAP00000030131/1-445 DVAAWLTLWL FGTSLVPFLL CSVLLSIVQA QAGWLQHDFG HLSVFGTSKW ENSTTRP00000016540/1-441 DVAAWLTLWL FGTSFLPFLL CAVLLGTVQA QAGWLQHDFG HLSVFSTSTW bmy_17467T0/1-448 DAAAWLTLWL CGTSFLPFLL CAVLLSTVQA QAGWLQHDFG HLSVFSTSTW BACU005389/1-440 DAAAWLTLWL CGTSFLPLLL CAVLLSTVQA QAGWLQHDFG HLSVFSTSTW 251 300 ENSP00000322229/1-501 NHLLHHFVIG HLKGAPASWW NHMHFQHHAK PNCFRKDPDI NMHPFFFALG ENSBTAP00000030131/1-445 NHLLHHFVIG HLKGAPASWW NHLHFQHHAK PNCFRKDPDI NMHPFFFALG ENSTTRP00000016540/1-441 NHLLHHFVIG HLKGAPASWW NHLHFQHHAK PNCFRKDPDI NMHPFFFALG bmy_17467T0/1-448 NHLLHHFVIG HLKGAPASWW NHLHFQHHAK PNCFRKDPDI NMHPFFFALG BACU005389/1-440 NHLLHHFVIG HLKGAPASWW NHLHFQHHAK PNCFRKDPDI NMHPFFFALG 301 350 ENSP00000322229/1-501 KILSVELGKQ KKKYMPYNHQ HKYFFLIGPP ALLPLYFQWY IFYFVIQRKK ENSBTAP00000030131/1-445 KVLSVELGKQ KKKYMPYNHQ HKYFFLIGPP ALLPVYFQWY IFYFVIHRKK ENSTTRP00000016540/1-441 KILSVELGKQ KKKYMPYNHQ HRYFFLIGPP ALLPLYFQWY IFYFVIQRKK bmy_17467T0/1-448 KILSVELGKQ KKKYMPYNHQ HRYFFLIGPP ALLPLYFQWY IFYFVIQRKK BACU005389/1-440 KILSVELGKQ KKKYMPYNHQ HRYFFLIGPP ALLPLYFQWY IFYFVIQRKK 351 400 ENSP00000322229/1-501 WVDLAWMITF YVRFFLTYVP LLGLKAFLGL FFIVRFLESN WFVWVTQMNH ENSBTAP00000030131/1-445 WVDLAWMITF YVRIFLTYVP LLGLKGFLGL VFMVRFLESN WFVWVTQMNH ENSTTRP00000016540/1-441 WVDLAWMISF YVRIFLTYVP LLGLKGFLGL FFMVRFLESN WFVWVTQMNH bmy_17467T0/1-448 WVDLAWMISF YVRIFLTYVP LLGLKGFLGL FFMVRFLESN WFVWVTQMNH BACU005389/1-440 WVDLAWMISF YVRIFLTYVP LLGLKGFLGL FFMVRFLESN WFVWVTQMNH 401 450 ENSP00000322229/1-501 IPMHIDHDRN MDWVSTQLQA TCNVHKSAFN DWFSGHLNFQ IEHHLFPTMP ENSBTAP00000030131/1-445 IPMHIDHDRN MDWVSTQLQA TCNVHKSAFN DWFSGHLNFQ IEHHLFPTMP ENSTTRP00000016540/1-441 IPMHIDYDRN VDWVSTQLQA TCNVHKSAFN DWFSGHLNFQ IEHHLFPTMP bmy_17467T0/1-448 IPMHIDYDRN VDWVSTQLQA TCNVHKSAFN DWFSGHLNFQ IEHHLFPTMP BACU005389/1-440 IPMHIDYDRN VDWVSTQLQA TCNVHKSAFN DWFSGHLNFQ IEHHLFPTMP 451 500 ENSP00000322229/1-501 RHNYHKVAPL VQSLCAKHGI EYQSKPLLSA FADIIHSL-- ---------- ENSBTAP00000030131/1-445 RHNYHKVAPL VQSLCAKHGI KYQSKPLFSA FADIVHSL-- ---------- ENSTTRP00000016540/1-441 RHNYHKAAPL VQSLCAKHGV EYQSKPLFSA FADIVHSL-- ---------- bmy_17467T0/1-448 RHSYHRVAPL VQSLCAKHGI EYQSKPLFSA FADIVQHRSK TQRGVRKPPG BACU005389/1-440 RHSYHRVAPL VQSLCAKHGI EYQSKPLFSA FADIVQHRSK TQRGVRKPPG 501 550 ENSP00000322229/1-501 KESGQLWLDA YLHQ ENSBTAP00000030131/1-445 KESGQLWLDA YLHQ ENSTTRP00000016540/1-441 RESGQLWLDA YLHQ bmy_17467T0/1-448 RRGGAVGTGM ---- BACU005389/1-440 RRGGAIGTGM ----