KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:40:05 2014 Check: 00 .. Name: bmy_17462T0/1-424 Len: 724 Check: 6482 Weight: 1.00 Name: ENSBTAP00000030163/1-689 Len: 724 Check: 4243 Weight: 1.00 Name: ENSP00000444201/1-478 Len: 724 Check: 2454 Weight: 1.00 Name: BACU005393/1-719 Len: 724 Check: 2371 Weight: 1.00 Name: ENSTTRP00000010638/1-358 Len: 724 Check: 5309 Weight: 1.00 // 1 50 bmy_17462T0/1-424 ---------- ---------- ---------- ---------- MQAGAEGWGI ENSBTAP00000030163/1-689 ---------- ---------- ---------- -----SDLCM SSPGAPTRDV ENSP00000444201/1-478 ---------- ---------- ---------- ---MYRDPEA ASPGAPSRDV BACU005393/1-719 MVERERASKR LLVGEEGLEQ TGLRWEPTGQ QVTGEGQLEG RGTGAPTRDV ENSTTRP00000010638/1-358 ---------- ---------- ---------- ---------- ----APTRDV 51 100 bmy_17462T0/1-424 F--------- ---------- --WGT----- -------GGV GTLAEKAPAR ENSBTAP00000030163/1-689 LLVSAIITVS LSVTVVLCGL CHWCQDCVPA VLGKRYKNSL ETVGTPDSGR ENSP00000444201/1-478 LLVSAIITVS LSVTVVLCGL CHWCQ----R KLGKRYKNSL ETVGTPDSGR BACU005393/1-719 LLVSAIITVS LSVTVVLCGL CHWCQ----R KLGKRYKNSL ETVGTPDSGR ENSTTRP00000010638/1-358 LLVSAIITVS LSVTVVLCGL CHWCQ----R KLGKRYKNSL ETVGTPDSGR 101 150 bmy_17462T0/1-424 GSQSRITL-- ---------- ---------- ---------- ---------- ENSBTAP00000030163/1-689 GRSEKKAINS CSDPVWGLHR SCGCVSVGER PETSTAPSSS PSAYHHHPTL ENSP00000444201/1-478 GRSEKKAI-- ---------- ---------- ---------- ---------- BACU005393/1-719 GRSEKKAIND LDRDFWNNNE STVQQKWSSY PPKEFILNIS PYAPYGDPRL ENSTTRP00000010638/1-358 GRSEKKAI-- ---------- ---------- ---------- ---------- 151 200 bmy_17462T0/1-424 ---------- ---------- ------GQRR GGWP-----C SHGQKSSSCW ENSBTAP00000030163/1-689 GSSGTLLAGA KVAAAAGLAV EREGRLGEKP AAAPPPGEDA LRSGGAAPSE ENSP00000444201/1-478 --NGTLLSGA KVAAAAGLAV EREGRLGEKP APVPPPGEDA LRSGGAAPSE BACU005393/1-719 SLNGTLLAGA KVAAAAGLAV EREGRLGEKP APVPPPGEDA LRSGGAAPSE ENSTTRP00000010638/1-358 ---------- ---------- ---------- ---------- ---------- 201 250 bmy_17462T0/1-424 PAGGGSYLGL RRFCCHPDPW CPA------- ---------- ---------- ENSBTAP00000030163/1-689 PGSGGKAAGR GRWRTVQSHL AAGKLNLSNF EDSTLSTATT LESIPSSTGE ENSP00000444201/1-478 PGSGGK-AGR GRWRTVQSHL AAGKLNLS-- ---------- ---------- BACU005393/1-719 PGSGGK-AGR GRWRMVQSHL AAGKLNLSNF EDSTLSTTTT LESIPSSTGE ENSTTRP00000010638/1-358 ---------- ---------- ---------- ---------- ---------- 251 300 bmy_17462T0/1-424 ---------- ------QPTS RSMLTRIPPA P--------- ---------- ENSBTAP00000030163/1-689 PKCQRPRTLT RQQSLQQPLS QHQRGRQPSQ PTTSQSLGQL QAHTASVPGP ENSP00000444201/1-478 ---------- ---------- ---------- ---------- ---------- BACU005393/1-719 PKCQRPRTLM RQQSLQQPLS QQQRGRQXXX XXXXXXXXXX XXXXXXXXXX ENSTTRP00000010638/1-358 ---------- ---------- ---------- ---------- ---------- 301 350 bmy_17462T0/1-424 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000030163/1-689 NPRAHGRGQA RQGSSAGSKY RPAGGRSRSN PGSWDHVVGQ IRNRGLDMKS ENSP00000444201/1-478 ---------- ---------- ---------- ---------- ---------- BACU005393/1-719 XXXXXXXXXX XXXXXXXXXX XXXXXXSRSN PGSWDHVVGQ IRNRGLDMKS ENSTTRP00000010638/1-358 ---------- ---------- ---------- ---------- ---------- 351 400 bmy_17462T0/1-424 ---------- ---------- ---------- ---------- --RLPTGGKA ENSBTAP00000030163/1-689 FLEGRMVVLS LVLGLSEQDD FANIPDLQNP GTQQNQNAQG DKRLPAGGKA ENSP00000444201/1-478 ---------- ---------- ---------- ---------- --KLPAGGKA BACU005393/1-719 FLEGRMVVLS LVLGLSEQDD FANIPDLQNP GTQQNQNAQG DKRLPTGGKA ENSTTRP00000010638/1-358 ---------- ---------- ---------- ---------- --KLPTGGKA 401 450 bmy_17462T0/1-424 VNTAPVPGQT PHDESDRRTE PRSSVSDLVN SLTSEMLMLS PGSEEDEVHE ENSBTAP00000030163/1-689 VNTAPVPGQT PHDESDRRTE PRSSVSDLVN SLTSEMLMLS PGSEEDEAHE ENSP00000444201/1-478 VNTAPVPGQT PHDESDRRTE PRSSVSDLVN SLTSEMLMLS PGSEEDEAHE BACU005393/1-719 VNTAPVPGQT PHDESDRRTE PRSSVSDLVN SLTSEMLMLS PGSEEDEVHE ENSTTRP00000010638/1-358 VNTAPVPGQT PHDESDRRTE PHSSVSDLVN SLTSEMLMLS PGSEEDEVHE 451 500 bmy_17462T0/1-424 GCSRENLGRI QFSVGYNFQE STLTVKIMKA QELPAKDFSG TSDPFVKIYL ENSBTAP00000030163/1-689 GCSRENLGRI QFSVGYNFQE STLTVKIMKA QELPAKDFSG TSDPFVKIYL ENSP00000444201/1-478 GCSRENLGRI QFSVGYNFQE STLTVKIMKA QELPAKDFSG TSDPFVKIYL BACU005393/1-719 GCSRENLGRI QFSVGYNFQE STLTVKIMKA QELPAKDFSG TSDPFVKIYL ENSTTRP00000010638/1-358 GCSRENLGRI QFSVGYNFQE STLTVKIMKA QELPAKDFSG TSDPFVKIYL 501 550 bmy_17462T0/1-424 LPDKKHKLET KVKRKNLNPH WNETFLFEGF PYEKVVQRVL YLQVLDYDRF ENSBTAP00000030163/1-689 LPDKKHKLET KVKRKNLNPH WNETFLFEGF PYEKVVQRVL YLQVLDYDRF ENSP00000444201/1-478 LPDKKHKLET KVKRKNLNPH WNETFLFEGF PYEKVVQRIL YLQVLDYDRF BACU005393/1-719 LPDKKHKLET KVKRKNLNPH WNETFLFEGF PYEKVVQRVL YLQVLDYDRF ENSTTRP00000010638/1-358 LPDKKHKLET KVKRKNLNPH WNETFLFEGF PYEKVVQRIL YLQVLDYDRF 551 600 bmy_17462T0/1-424 SRNDPIGEVS IPLNKVDLTQ MQTFWKDLKP CSDGSGSRGE LLLSLCYNPS ENSBTAP00000030163/1-689 SRNDPIGEVS IPLNKVDLTQ MQTFWKDLKP CSDGSGSRGE LLLSLCYNPS ENSP00000444201/1-478 SRNDPIGEVS IPLNKVDLTQ MQTFWKDLKP CSDGSGSRGE LLLSLCYNPS BACU005393/1-719 SRNDPIGEVS IPLNKVDLTQ MQTFWKDLKP CSDGSGSRGE LLLSLCYNPS ENSTTRP00000010638/1-358 SRNDPIGEVS IPLNKVDLTQ MQTFWKDLKP CSDGSGSRGE LLLSLCYNPS 601 650 bmy_17462T0/1-424 ANSIIVNIIK ARNLKAMDIG GTSDPYVKVW LMYKDKRVEK KKTVTMKRNL ENSBTAP00000030163/1-689 ANSIIVNIIK ARNLKAMDIG GTSDPYVKVW LMYKDKRVEK KKTVTMKRNL ENSP00000444201/1-478 ANSIIVNIIK ARNLKAMDIG GTSDPYVKVW LMYKDKRVEK KKTVTMKRNL BACU005393/1-719 ANSIIVNIIK ARNLKAMDIG GTSDPYVKVW LMYKDKRVEK KKTVTMKRNL ENSTTRP00000010638/1-358 ANSIIVNIIK ARNLKAMDIG GTSDPYVKVW LMYKDKRVEK KKTVTMKRNL 651 700 bmy_17462T0/1-424 NPIFNESFXF DIPTEKLRET TIIITVMDKD KLSRNDVIGK IYLSWKSGPG ENSBTAP00000030163/1-689 NPIFNESFAF DIPTEKLRET TIIITVMDKD KLSRNDVIGK IYLSWKSGPG ENSP00000444201/1-478 NPIFNESFAF DIPTEKLRET TIIITVMDKD KLSRNDVIGK IYLSWKSGPG BACU005393/1-719 NPIFNESFAF DIPTEKLRET TIIITVMDKD KLSRNDVIGK IYLSWKSGPG ENSTTRP00000010638/1-358 NPIFNESFAF DIPTEKLRET TIVITVMDKD KLSRNDVIGK ---------- 701 750 bmy_17462T0/1-424 EVKHWKDMIA RPRQPVAQWH QLKA ENSBTAP00000030163/1-689 EVKHWKDMIA RPRQPVAQWH QLKA ENSP00000444201/1-478 EVKHWKDMIA RPRQPVAQWH QLKA BACU005393/1-719 EVKHWKDMIA RPRQPVAQWH QLKA ENSTTRP00000010638/1-358 ---------- ---------- ----