KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:40:10 2014 Check: 00 .. Name: ENSP00000358857/1-254 Len: 315 Check: 630 Weight: 1.00 Name: ENSTTRP00000013203/1-255 Len: 315 Check: 2416 Weight: 1.00 Name: ENSBTAP00000030177/1-261 Len: 315 Check: 4952 Weight: 1.00 Name: bmy_22551T0/1-312 Len: 315 Check: 1894 Weight: 1.00 Name: BACU011434/1-226 Len: 315 Check: 7759 Weight: 1.00 // 1 50 ENSP00000358857/1-254 MDNYADLSDT ELTTLLRRYN IPHGPVVGST RRLYEKKIFE YETQRRRLSP ENSTTRP00000013203/1-255 MDDYAVLSDT ELAAVLRQYN IPHGPVVGST RKLYEKKIFE YETQRRRLSP ENSBTAP00000030177/1-261 MDDYAALSDS ELAAVLRQYN IPHGPVVGST RKLYEKKIFE YESQRRRLSP bmy_22551T0/1-312 MDDYAVLSDA ELAAVLRQYN IPHGPVVGST RKLYEKKIFE YETQRRRLSP BACU011434/1-226 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000358857/1-254 PSSSAAS-SY SF-------- ---------- ---------- ---------- ENSTTRP00000013203/1-255 PNSSASSFSC RF-------- ---------- ---------- ---------- ENSBTAP00000030177/1-261 PSSSASSFSY RF-------- ---------- ---------- ---------- bmy_22551T0/1-312 PNSSTSSFSY RFSGEAPAPR LHLAALGDRV WEEGVAMVWQ GRWPGGAQGK BACU011434/1-226 ---------- ---------- ---------- ------MVWQ GRWPVGAQGK 101 150 ENSP00000358857/1-254 ---------- -----SDLNS TRGDADMYDL PKKEDALLYQ SKGYNDDYYE ENSTTRP00000013203/1-255 ---------- -----SDLDS ASVDSDMYDL PKKEDALLYQ SKGYNYDYCE ENSBTAP00000030177/1-261 ---------- -----SDLDS ASVDSDMYDL PKKEDALLYQ SKGYNDDYYE bmy_22551T0/1-312 GEVSLGGKWP WPLPHSDLDS ASVDSDMYDL PKKEDALLYQ SKGCNDDYYE BACU011434/1-226 GEVSLGGKWP WPLPHSDLDS ASVDSDMYDL PKKEDALLYQ SKGYNDDYYE 151 200 ENSP00000358857/1-254 ESYFTTRTYG EPESAGPSRA VRQSVTSFPD ADAFHHQVHD DDLLSSSEEE ENSTTRP00000013203/1-255 ESYLTTRTYG EPESVGTSKG FRQPSASLSD ADTFHHQVHD DNLF-SSEEE ENSBTAP00000030177/1-261 ESYLTTRTYG EPESMGTSKG FRQPSASLSD ADPFHRQVRD DNLF-SLEEE bmy_22551T0/1-312 ESYLTTRTYG EPESVGTSKG FRQPSASLSD ADTFHHQVRE DNLF-SSEEE BACU011434/1-226 ESYLTTRTYG EPESVGTSKG FRQPSASLSD ADTFHHQVRE DNLF-SSEEE 201 250 ENSP00000358857/1-254 CKDRERPMYG RDSAYQSITH YRPVS-ASRS SLDLSYYPT- SSSTSFMSSS ENSTTRP00000013203/1-255 GKDRERPVYG RDSAYQSIAH YRPVSNVSRS SLGLSYYPT- SSSTSAVSSP ENSBTAP00000030177/1-261 GKDRERLLYG QDSAYQNIAH YRPISNISRS SLGLSYYPTS SSTSSVSSSS bmy_22551T0/1-312 GKDRERPVYG RDSAYQSIAH YRPVSNVSRS SLGLSYYPT- SSTSAVSSSS BACU011434/1-226 GKDRERPVYG RDSAYQSIAH YRPVSNVSRS SLGLSYYPT- SSTSAVSSSS 251 300 ENSP00000358857/1-254 SSSSSWLTRR AIRPENRAPG -AGLGQDRQV PLWGQLLLFL VFVIVLFFIY ENSTTRP00000013203/1-255 SSPPSWLARR AIRPEKRAPG -AALGQDHQV PLWGQMLLFL IFAAFLVFVY ENSBTAP00000030177/1-261 SSAPSWLTRR AIRPEKQAPG AAGLGQDRQV PLWGQVLLFL VFAAFLLFVY bmy_22551T0/1-312 SPPPSWLTRR AIRPEKQAPG -AGLGQDRQV PLWGQMLLFL VFAAFLLFVY BACU011434/1-226 SPPPSWLTRR AIRPEKQAPG -AGLGQDRQV PLWGQMLLFL VFAAFLLFVY 301 350 ENSP00000358857/1-254 HFMQAEEGNP F---- ENSTTRP00000013203/1-255 HCMQA-DSNP FR--- ENSBTAP00000030177/1-261 YFMQAEDGNP FWAEP bmy_22551T0/1-312 YSMQAEDSNP FWAGP BACU011434/1-226 YSMQAEDSNP FWAGP