KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:40:14 2014 Check: 00 .. Name: ENSP00000362125/1-1148 Len: 1148 Check: 8960 Weight: 1.00 Name: ENSTTRP00000003946/1-1145 Len: 1148 Check: 6025 Weight: 1.00 Name: ENSBTAP00000030199/1-1098 Len: 1148 Check: 9519 Weight: 1.00 Name: BACU009111/1-920 Len: 1148 Check: 7828 Weight: 1.00 Name: bmy_10068T0/1-912 Len: 1148 Check: 2185 Weight: 1.00 // 1 50 ENSP00000362125/1-1148 MESLLLPVLL LLAILWTQAA ALINLKYSVE EEQRAGTVIA NVAKDAREAG ENSTTRP00000003946/1-1145 MESLLLPVLL LLAVLWTQAA ALINLKYSVE EEQRAGTVIA NVAKDAREAG ENSBTAP00000030199/1-1098 MESLLLPVLL LLAVLWTQAA ALINLKYSVE EEQRAGTVIA NVAKDAREAG BACU009111/1-920 MESLLLPVLL LLAVLWTQAA ALINLKYSVE EEQRAGTVIA NVAKDAREAG bmy_10068T0/1-912 MESLLLPVLL LLAVLWTQAA ALINLKYSVE EEQRAGTVIA NVAKDAREAG 51 100 ENSP00000362125/1-1148 FALDPRQASA FRVVSNSAPH LVDINPSSGL LVTKQKIDRD LLCRQSPKCI ENSTTRP00000003946/1-1145 FALDPRQASA FRVVSNSAPH LVDINPSSGL LVTKQKIDRD LLCRQSPKCI ENSBTAP00000030199/1-1098 FALDPRQASA FRVVSNSAPH LVDINPSSGL LVTKQKIDRD LLCRQSPKCI BACU009111/1-920 FALDPRQASA FRVVSNSAPH LVDINPSSGL LVTKQKIDRD LLCRQSPKCI bmy_10068T0/1-912 FALDPRQASA FRVVSNSAPH LVDINPSSGL LVTKQKIDRD LLCRQSPKCI 101 150 ENSP00000362125/1-1148 ISLEVMSSSM EICVIKVEIK DLNDNAPSFP AAQIELEISE AASPGTRIPL ENSTTRP00000003946/1-1145 ISLEVMSSSM EICVIKVEIK DLNDNAPSFP AAQIELEISE AASPGTRIPL ENSBTAP00000030199/1-1098 ISLEVMSSSM EICVIKVEIK DLNDNAPSFP AAQIELEISE AASPGTRIPL BACU009111/1-920 ISLEVMSSSM EICVIKVEIK DLNDNAPSFP ATQIELEISE AASPGTRIPL bmy_10068T0/1-912 ISLEVMSSSM EICVIKVEIK DLNDNAPSFP ATQIELEISE AASPGTRIPL 151 200 ENSP00000362125/1-1148 DSAYDPDSGS FGVQTYELTP NELFGLEIKT RGDGSRFAEL VVEKSLDRET ENSTTRP00000003946/1-1145 DSAYDPDSGS FGVQTYELTP NELFGLEIKT RGDGSRFAEL VVEKSLDRET ENSBTAP00000030199/1-1098 DSAYDPDSGS FGVQTYELTP NELFGLEIKT RGDGSRFAEL VVEKSLDRET BACU009111/1-920 DSAYDPDSGS FGVQTYELTP NELFGLEIKT RGDGSRFAEL VVEKSLDRET bmy_10068T0/1-912 DSAYDPDSGS FGVQTYELTP NELFGLEIKT RGDGSRFAEL VVEKSLDRET 201 250 ENSP00000362125/1-1148 QSHYSFRITA LDGGDPPRLG TVGLSIKVTD SNDNNPVFSE STYAVSVPEN ENSTTRP00000003946/1-1145 QSHYSFRITA LDGGDPPHLG TVGLSIKVTD SNDNNPVFGE STYLVTVPEN ENSBTAP00000030199/1-1098 QSHYSFRITA LDGGDPPHLG TVGLSIKVTD SNDNNPVFGE STYSVSVPEN BACU009111/1-920 QSHYSFRITA LDGGDPPHLG TVGLSIKVTD SNDNNPVFGE STYSVTVPEN bmy_10068T0/1-912 QSHYSFRITA LDGGDPPHLG TVGLSIKVTD SNDNNPVFGE STYSVTVPEN 251 300 ENSP00000362125/1-1148 SPPNTPVIRL NASDPDEGTN GQVVYSFYGY VNDRTRELFQ IDPHSGLVTV ENSTTRP00000003946/1-1145 SPPNTPVIRL NASDPDEGTN GQVVYSFYGY VNDRTRELFQ IDPHSGLVTV ENSBTAP00000030199/1-1098 SPPNTPVIRL NATDPDEGTN GQVVYSFYGY VNDRTRELFQ IDPHSGLVTV BACU009111/1-920 SPPNTPVIRL NASDPDEGTN GQVVYSFYGY VNDRTRELFQ IDPHSGLVTV bmy_10068T0/1-912 SPPNTPVIRL NASDPDEGTN GQVVYSFYGY VNDRTRELFQ IDPHSGLVTV 301 350 ENSP00000362125/1-1148 TGALDYEEGH VYELDVQAKD LGPNSIPAHC KVTVSVLDTN DNPPVINLLS ENSTTRP00000003946/1-1145 TGALDYEEGH VYELDVQAKD LGPNSIPAHC KVTVSVLDTN DNPPVINLLS ENSBTAP00000030199/1-1098 TGALDYEEGH VYELDVQAKD LGPNSIPAHC KVTVSVLDTN DNPPVINLLS BACU009111/1-920 TGALDYEEGH VYELDVQAKD LGPNSIPAHC KVTVSVLDTN DNPPVINLLS bmy_10068T0/1-912 TGALDYEEGH VYELDVQAKD LGPNSIPAHC KVTVSVLDTN DNPPVINLLS 351 400 ENSP00000362125/1-1148 VNSELVEVSE SAPPGYVIAL VRVSDRDSGL NGRVQCRLLG NVPFRLQEYE ENSTTRP00000003946/1-1145 VNSELVEVSE SAPPGYVIAL VRVSDRDSGL NGRVQCRLLG NVPFRLQEYE ENSBTAP00000030199/1-1098 VNSELVEVSE SAPPGYVIAL VRVSDRDSGL NGRVQCRLLG NVPFRLQEYE BACU009111/1-920 VNSELVEVSE SAPPGYVIAL VRVSDRDSGL NGRVQCRLLG NVPFRLQEYE bmy_10068T0/1-912 VNSELVEVSE SAPPGYVIAL VRVSDRDSGL NGRVQCRLLG NVPFRLQEYE 401 450 ENSP00000362125/1-1148 SFSTILVDGR LDREQHDQYN LTIQARDGGV PMLQSAKSFT VLITDENDNH ENSTTRP00000003946/1-1145 SFSTILVDGR LDREQHDQYN LTIQARDGGV PMLQSSKSFT VRITDENDNH ENSBTAP00000030199/1-1098 SFSTILVDGR LDREQHDQYN LTIQARDGGV PMLQSAKSFT VRITDENDNH BACU009111/1-920 SFSTILVDGR LDREQHDQYN LTIQARDGGV PMLQSSKSFT VRITDENDNH bmy_10068T0/1-912 SFSTILVDGR LDREQHDQYN LTIQARDGGV PMLQSSKSFT VRITDENDNH 451 500 ENSP00000362125/1-1148 PHFSKPYYQV IVQENNTPGA YLLSVSARDP DLGLNGSVSY QIVPSQVRDM ENSTTRP00000003946/1-1145 PHFSKPYYQV IVQENNTPGA YLLSVSARDP DLGLNGSVSY QIVPSQVRDM ENSBTAP00000030199/1-1098 PHFSKPYYQV IVQENNTPGA YLLSVSARDP DLGLNGSVSY QIVPSQVRDM BACU009111/1-920 PHFSKPYYQV IVQENNTPGA YLLSVSARDP DLGLNGSVSY QIVPSQVRDM bmy_10068T0/1-912 PHFSKPYYQV IVQENNTPGA YLLSVSARDP DLGLNGSVSY QIVPSQVRDM 501 550 ENSP00000362125/1-1148 PVFTYVSINP NSGDIYALRS FNHEQTKAFE FKVLAKDGGL PSLQSNATVR ENSTTRP00000003946/1-1145 PVFTYVSINP NSGDIYALRS FNHEQTKAFE FKVLAKDGGL PSLQSNSTVR ENSBTAP00000030199/1-1098 PVFTYVSINP NSGDIYALRS FNHEQTKAFE FKVLAKDGGL PSLQSNATVR BACU009111/1-920 PVFTYVSINP NSGDIYALRS FNHEQTKAFE FKVLAKDGGL PSLQSNATVR bmy_10068T0/1-912 PVFTYVSINP NSGDIYALRS FNHEQTKAFE FKVLAKDGGL PSLQSNATVR 551 600 ENSP00000362125/1-1148 VIILDVNDNT PVITAPPLIN GTAEVYIPRN SGIGYLVTVV KAEDYDEGEN ENSTTRP00000003946/1-1145 VIILDVNDNT PVITAPPLIN GTAEVYIPRN SGIGYLVTVV KADDYDEGEN ENSBTAP00000030199/1-1098 VIILDVNDNT PVITAPPLIN GTAEVYIPRN SGIGYLVTVV KADDYDEGEN BACU009111/1-920 VIILDVNDNT PVITAPPLIN GTAEVYIPRN SGIGYLVTVV KADDYDEGEN bmy_10068T0/1-912 VIILDVNDNT PVITAPPLIN GTAEVYIPRN SGIGYLVTVV KADDYDEGEN 601 650 ENSP00000362125/1-1148 GRVTYDMTEG DRGFFEIDQV NGEVRTTRTF GESSKSSYEL IVVAHDHGKT ENSTTRP00000003946/1-1145 GRVTYDMTEG DRGFFEIDQV NGEVRTTRTF SESSKASYEL IVVAHDHGKT ENSBTAP00000030199/1-1098 GRVTYDMTEG DRGFFEIDQI NGEVRTTRTF SESSKASYEL IVVAHDHGKT BACU009111/1-920 GRVTYDMTEG DRGFFEIDQV NGEVRTTRTF SESSKASYEL IVVAHDHGKT bmy_10068T0/1-912 GRVTYDMTEG DRGFFEIDQV NGEVRTTRTF SESSKASYEL IVVAHDHGKT 651 700 ENSP00000362125/1-1148 SLSASALVLI YLSPALDAQE SMGSVNLSLI FIIALGSIAG ILFVTMIFVA ENSTTRP00000003946/1-1145 SLSASALVLI YLSPALDAQE SMGSVNLSLI FIIALGSIAG ILFVTMIFVA ENSBTAP00000030199/1-1098 SLSASALVLI YLSPALDAQE SMGSVNLSLI FIIALGSIAG ILFVTMIFVA BACU009111/1-920 SLSASALVLI YLSPALDAQE SMGSVNLSLI FIIALGSIAG ILFVTMIFVA bmy_10068T0/1-912 SLSASALVLI YLSPALDAQE SMGSVNLSLI FIIALGSIAG ILFVTMIFVA 701 750 ENSP00000362125/1-1148 IKCKRDNKEI RTYNCSNCLT ITCLLGCFIK GQNSKCLHCI SVSPISEEQD ENSTTRP00000003946/1-1145 IKCKRDNKEI RTYNCSNCLT IICLLGCFKK GQNSKCLHCI LVSPISKEQD ENSBTAP00000030199/1-1098 IKCKRDNKEI RTYNC----- ---------- ---------- ---------- BACU009111/1-920 IKCKRDNKEI RTYNC----- ---------- ---------- ---------- bmy_10068T0/1-912 IKCKRDNKEI RTYNCSNCLT ITCLLSCFKK GQNSKCLHCI LVSPISEEQD 751 800 ENSP00000362125/1-1148 KKTEEKVSLR GKRIAEYSYG HQKKSSKKKK ISKNDIRLVP RDVEETDKMN ENSTTRP00000003946/1-1145 KKAEEKVSLR GKRIAEYSYG HQKKSSKKKK INKNDIRLVP RDVEETDKMN ENSBTAP00000030199/1-1098 ---------- --RIAEYSYG HQKKSSKKKK ISKNDIRLVP RDVEETDKMN BACU009111/1-920 ---------- --RIAEYSYG HQKKSSKKKK INKNDIRLVP RDVEETDKMN bmy_10068T0/1-912 KKAEEKVSLR GKRIAEYSYG HQKKSSKKKK INKNDIRLVP RDVEETDKMN 801 850 ENSP00000362125/1-1148 VVSCSSLTSS LNYFDYHQQT LPLGCRRSES TFLNVENQNT RNTSANHIYH ENSTTRP00000003946/1-1145 VVSCSSLTSS LNYFDYHQQT LPLGCRRSES TFLNVENQNT RNTSANHIYH ENSBTAP00000030199/1-1098 VVSCSSLTSS LNYFDYHQQT LPLGCRRSES TFLNVENQNT RNTSANHIYH BACU009111/1-920 VVSCSSLTSS LNYFDYHQQT LPLGCRRSES TFLNVENQNT RNTSANHIYH bmy_10068T0/1-912 VVSCSSLTSS LNYFDYHQQT LPLGCRRSES TFLNVENQNT RNTSANHIYH 851 900 ENSP00000362125/1-1148 HSFNSQGPQQ PDLIINGVPL PETENYSFDS NYVNSRAHLI KSSSTFKDLE ENSTTRP00000003946/1-1145 HSFNSQGPQQ PDLIINGVPL PETENYSFDS NYVNSRAHLI KSSSTFKDLE ENSBTAP00000030199/1-1098 HSFNSQGPQQ PDLIINGMPL PETENYSFDS NYVNSRAHLI KSSSTFKDLE BACU009111/1-920 HSFNSQGPQQ PDLIINGVPL PE-------- ---------- ---------- bmy_10068T0/1-912 HSFNSQGPQQ PDLIINGVPL PEVS------ ---------- ---------- 901 950 ENSP00000362125/1-1148 GNSLKDSGHE ESDQTDSEHD VQRSLYCDTA VNDVLNTSVT SMGSQMPDHD ENSTTRP00000003946/1-1145 GNSLKDSGHE ESDQTDSEHD VQRSLYCDTA VNDVLNTSVT SMGSQMPDHD ENSBTAP00000030199/1-1098 GNSLKDSGHE ESDQTDSEHD IQRSLYCDTA VNDVLNTSVT SMGSQMPDHD BACU009111/1-920 ---------- ---------- CSHHLYVDLL LSSQVWCS-- ---------- bmy_10068T0/1-912 ---------- ---------- AAKRL----- ---------- ---------- 951 1000 ENSP00000362125/1-1148 QNEGFHCREE CRILGHSDRC WMPRNPMPIR SKSPEHVRNI IALSIEATAA ENSTTRP00000003946/1-1145 QNEGFHCREE CRILGHSDRC WMPRNPMPTR SKSPEHVRNI IALSIEATAA ENSBTAP00000030199/1-1098 QNEGFHCREE CRILGHSDRC WMPRNPMPTC SKSPEHVRNI ITLSIEATAA BACU009111/1-920 ------CEAN CNIFD----- ---------- TRHPQGVCVV CY-------- bmy_10068T0/1-912 ---------- CAVL------ ---------- ---PDLFPML LA-------- 1001 1050 ENSP00000362125/1-1148 DVEAYDDCGP TKRTFATFGK DVSDHPAEER PTLKGKRTVD VTICSPKVNS ENSTTRP00000003946/1-1145 DVEAYDDCGP TKRTFATFGK DVSDHPAEEK PTLKGRRTVD VTICSPKVNG ENSBTAP00000030199/1-1098 DVEAYDDCGP TKRTFATFGK DVSDHPAEER PTLKGRRTVD VTTCSPKVNS BACU009111/1-920 --------GH SRSSF----- ---------- ---------- ---ISSSAVA bmy_10068T0/1-912 --------GP HQPLW----- ---------- ---------- ---------- 1051 1100 ENSP00000362125/1-1148 VIREAGNGCE AISPVTSPLH LKSSLPTKPS VSYTIALAPP ARDLEQYVNN ENSTTRP00000003946/1-1145 AIREAGNGCE AISPVTSPLH LKSPLPTKPS VSYTVALAPP ARDLEQY--- ENSBTAP00000030199/1-1098 AIREAGNGCE AISPVTSPLH LKSPLPTKPS VSYTVALAPP ARDLEQY--- BACU009111/1-920 VDEFAGQGCM WQTELNASNY PTESL----S ACYLSA---- ---------- bmy_10068T0/1-912 ---------- WHIPW----- ---------- ---------- ---------- 1101 1150 ENSP00000362125/1-1148 VNNGPTRPSE AEPRGADSEK VMHEVSPILK EGRNKESPGV KRLKDIVL ENSTTRP00000003946/1-1145 VNNGPSRPSE AEPRGADGEK VVHEVSPILK EGRDKESPGV KRLKDIIL ENSBTAP00000030199/1-1098 VNNGPSRPSE AEPRGADGEK VVHEVNPILK EGRDKESPGV KRLKDIIL BACU009111/1-920 ---------- ---------- ---------- ---NNETKTS VRL----- bmy_10068T0/1-912 ---------- ---------- ---------- QGWENFSA-- --------