KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:40:16 2014 Check: 00 .. Name: bmy_22383T0/1-291 Len: 431 Check: 7259 Weight: 1.00 Name: ENSP00000216554/1-431 Len: 431 Check: 455 Weight: 1.00 Name: ENSBTAP00000030260/1-429 Len: 431 Check: 4676 Weight: 1.00 Name: ENSTTRP00000002234/1-356 Len: 431 Check: 8327 Weight: 1.00 Name: BACU006301/1-430 Len: 431 Check: 7833 Weight: 1.00 // 1 50 bmy_22383T0/1-291 MSVNLNHSVS DQFYRYKMPR LIAKVEGKGN GIKTVIVNMV DVAKVLNRPP ENSP00000216554/1-431 MSVNVNRSVS DQFYRYKMPR LIAKVEGKGN GIKTVIVNMV DVAKALNRPP ENSBTAP00000030260/1-429 MSVNVNRSVS DQFYRYKMPR LIAKVEGKGN GIKTVIVNMV DVAKALNRPP ENSTTRP00000002234/1-356 MSVNVNRSVS DQFYRYKMPR LIAKVEGKGN GIKTVIVNMV DVAKALNRPP BACU006301/1-430 MSVNVNRSVS DQFYRYKMPR LIAKVEGKGN GIKTVIVNMV DVAKALNRPP 51 100 bmy_22383T0/1-291 MYPTKYFGCE LGAQTQFDVK NDRYIVSGSH EANKLQDMLD GFIKKFVLCP ENSP00000216554/1-431 TYPTKYFGCE LGAQTQFDVK NDRYIVNGSH EANKLQDMLD GFIKKFVLCP ENSBTAP00000030260/1-429 TYPTKYFGCE LGAQTQFDVK NDRYIVNGSH EANKLQDMLD GFIKKFVLCP ENSTTRP00000002234/1-356 TYPTKYFGCE LGAQTQFDVK NDRYIVNGSH EANKLQDMLD GFIKKFVLCP BACU006301/1-430 TYPTKYFGCE LGAQTQFDVK NDRYIVNGSH EANKLQDMLD GFIKKFVLCP 101 150 bmy_22383T0/1-291 ECENPEMDLH VNPKKQTIGN SCKACGYXGM LDTHHKLCTF ILKNPPENSD ENSP00000216554/1-431 ECENPETDLH VNPKKQTIGN SCKACGYRGM LDTHHKLCTF ILKNPPENSD ENSBTAP00000030260/1-429 ECENPETDLH VNPKKQTIGN SCKACGYRGM LDTHHKLCTF ILKNPPENSD ENSTTRP00000002234/1-356 ECENPETDLH VNPKKQTIGN SCKACGYRGM LDTHHKLCTF ILKNPPENSD BACU006301/1-430 ECENPETDLH VNPKKQTIGN SCKACGYRGM LDTHHKLCTF ILKNPPENSD 151 200 bmy_22383T0/1-291 SGTGKKEKEK KNRKGKDKEN GSVSSSETPP PPPPPNEIS- PLHAVEEEEN ENSP00000216554/1-431 SGTGKKEKEK KNRKGKDKEN GSVSSSETPP PPPPPNEINP PPHTMEEEED ENSBTAP00000030260/1-429 SSTGKKEKEK KNRKGKDKEN GSVSSSET-- PPPPPNEISP PPHAVEEEED ENSTTRP00000002234/1-356 SGTGKKEKEK KNRKGKDKEN GSMSSSETPP PPPPPSEIS- PPHAVEEEED BACU006301/1-430 SGTGKKEKEK KNRKGKDKEN GSVSSSETPP PPPPPNEIS- LPHAVEEEED 201 250 bmy_22383T0/1-291 DDWGEDTTEE AQRRGMDEIS DHAKVLTLSD DLEXTAEERV NILFDFVKKK ENSP00000216554/1-431 DDWGEDTTEE AQRRRMDEIS DHAKVLTLSD DLERTIEERV NILFDFVKKK ENSBTAP00000030260/1-429 DDWGEDTTEE AQRRRMDEIS DHAKVLTLSD DLERTVEERV NILFDFVKKK ENSTTRP00000002234/1-356 DDWGEDTTEE AQRRRMDEIS DHAKVLTLSD DLERTVEERV NILFDFVKKK BACU006301/1-430 DDWGEDTTEE AQRRRMDEIS DHAKVLTLSD DLERTVEERV NILFDFVKKK 251 300 bmy_22383T0/1-291 KEEGVIDSSD EEIVAEAERL DVKAMGPLVL TEVLFNEKIR TN-------- ENSP00000216554/1-431 KEEGVIDSSD KEIVAEAERL DVKAMGPLVL TEVLFNEKIR EQIKKYRRHF ENSBTAP00000030260/1-429 KEEGIIDSSD KEIVAEAERL DVKAMGPLVL TEVLFNEKIR EQIKKYRRHF ENSTTRP00000002234/1-356 KEEGVIDSSD KEIVAEAERL DVKAMGPLVL TEVLFNEKIR EQIKKYRRHF BACU006301/1-430 KEEGVIDSSD KEIVAEAERL DVKAMGPLVL TEVLFNEKIR EQIKKYRRHF 301 350 bmy_22383T0/1-291 ---------- ---------- ---------- ---------- ---------- ENSP00000216554/1-431 LRFCHNNKKA QRYLLHGLEC VVAMHQAQLI SKIPHILKEM YDADLLEEEV ENSBTAP00000030260/1-429 LRFCHNNKKA QRYLLHGLEC VVAMHQAQLI SKIPHILKEM YDADLLEEEV ENSTTRP00000002234/1-356 LRFCHNNKKA QRYLLHGLEC VVAMHQAQLI SKIPHILKEM YDADLLEEEV BACU006301/1-430 LRFCHNNKKA QRYLLHGLEC VVAMHQAQLI SKIPHILKEM YDADLLEEEV 351 400 bmy_22383T0/1-291 ---------- ---------- ---------- ---------- ---------- ENSP00000216554/1-431 IISWSEKASK KYVSKELAKE IRVKAEPFIK WLKEAEEESS GGEEEDEDEN ENSBTAP00000030260/1-429 IISWSEKTSK KYVSKELAKE IRVKAEPFIK WLKEAEEESS GGEDDDEDEN ENSTTRP00000002234/1-356 IISWSEK--- ---------- ---------- ---------- ---------- BACU006301/1-430 IISWSEKASK KYVSKELAKE IRVKAEPFIK WLKEAEEESS GGEDDDEDEN 401 450 bmy_22383T0/1-291 ---------- ---------- ---------- - ENSP00000216554/1-431 IEVVYSKAAS VPKVETVKSD NKDDDIDIDA I ENSBTAP00000030260/1-429 IEVVYSKTAS VPKVEAVKSD NKDDDIDIDA I ENSTTRP00000002234/1-356 ---------- ---------- ---------- - BACU006301/1-430 IEVVYSKTAS VPKVEAVKSD NKDDDIDIDA I