KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:40:16 2014 Check: 00 .. Name: ENSP00000263578/1-486 Len: 527 Check: 5899 Weight: 1.00 Name: ENSBTAP00000030261/1-486 Len: 527 Check: 5314 Weight: 1.00 Name: ENSTTRP00000001469/1-486 Len: 527 Check: 4486 Weight: 1.00 Name: bmy_08496T0/1-527 Len: 527 Check: 6785 Weight: 1.00 Name: BACU010186/1-486 Len: 527 Check: 5707 Weight: 1.00 // 1 50 ENSP00000263578/1-486 MIRRVLPHGM GRGLLTRRPG TRRGGFSL-- ---------- ---------- ENSBTAP00000030261/1-486 MLRRALRLRL GPCLSGRGLG TYRRGSTL-- ---------- ---------- ENSTTRP00000001469/1-486 MLRRALRLGL GPGLLGRGLG AHREGSTL-- ---------- ---------- bmy_08496T0/1-527 MLRGALRFGL SPGLLGRGLG THRGGSTLGE AEGSGGCRGS GVSPVSSHVT BACU010186/1-486 MLRGALRFGL GPGLLGRGLG THRGGSTL-- ---------- ---------- 51 100 ENSP00000263578/1-486 ---------- ---------D WDGKVSEIKK KIKSILPGRS CDLLQDTSHL ENSBTAP00000030261/1-486 ---------- ---------D WDGKVSEIKK KIQSIFPGGA WNPLYDTSHL ENSTTRP00000001469/1-486 ---------- ---------D WHGKVSEIKK KIQSVLPGGA WSPLCDTSHL bmy_08496T0/1-527 FRTRGPGPRW EDSGSLGAGD WDGKVSEIRK KIQSILPGGA WSPLCDTSHL BACU010186/1-486 ---------- ---------D WDGKVSEIKK KIQSILPGGA WSPLCDTSHL 101 150 ENSP00000263578/1-486 PPEHSDVVIV GGGVLGLSVA YWLKKLESRR GAIRVLVVER DHTYSQASTG ENSBTAP00000030261/1-486 PPERSDVVIV GGGVLGLSVA YWLKRLEKQQ GAIRVLVVER DHTYARASTV ENSTTRP00000001469/1-486 PPEHSDVVIV GGGVLGLSVA YWLKRLEKRQ GAIRVLVVER DHTYSQASTV bmy_08496T0/1-527 PPEHSDVVIV GGGVVGLSVA YWLKRLEKQQ GAIRVLVVER DHTYSQASTV BACU010186/1-486 PPEHSDVVIV GGGVVGLSVA YWLKRLEKQQ GAVRVLVVER DHTYSQASTV 151 200 ENSP00000263578/1-486 LSVGGICQQF SLPENIQLSL FSASFLRNIN EYLAVVDAPP LDLRFNPSGY ENSBTAP00000030261/1-486 LSVGGIRQQF SLPQNVQLSL FSAEFLRNIN EYLAVVDDPP LDLQFNPSGY ENSTTRP00000001469/1-486 LSVGGIRQQF SLPENIQLSL FSVEFLRNIN EYLAVVDDPP LDLQFNPSGY bmy_08496T0/1-527 LSVGGIRQQF SLPENIQLSL FSVEFLRNIN EYLAVVDDPP LDLQFNPSGY BACU010186/1-486 LSVGGIRQQF SLPENIQLSL FSVEFLRNIN EYLAVVDDPP LDLQFNPSGY 201 250 ENSP00000263578/1-486 LLLASEKDAA AMESNVKVQR QEGAKVSLMS PDQLRNKFPW INTEGVALAS ENSBTAP00000030261/1-486 LLLASEEGAA IMERNVKMQR QEGAKVCLMS PEQLQKKFPW INTEGVALAS ENSTTRP00000001469/1-486 LFLASEEGAT IMENNVKVQR QEGAKVCLMS PEQLRKKFPW MNTEGVALAS bmy_08496T0/1-527 LFLASEEGAT IMENNVKVQR QEGAKVCLMS PEQLQKKFPW INTEGVALAS BACU010186/1-486 LFLASEEGAM IMENNVKVQR QEGAKVCLMS PEQLRKKFPW INTEGVALAS 251 300 ENSP00000263578/1-486 YGMEDEGWFD PWCLLQGLRR KVQSLGVLFC QGEVTRFVSS SQRMLTTDDK ENSBTAP00000030261/1-486 YGLENEGWFD PWCLLQGLRR KLQSMGVLFC QGEVTRFISS SSHMETASGE ENSTTRP00000001469/1-486 YGLENEGWFD PWCLLQGLRR KVQSMGVLFC HGEVTRFVSS SNHMETAIGE bmy_08496T0/1-527 YGLENEGWFD PWCLLQGLRR KVQSMGVLFC HGEVTRFVSS SNHMETASGE BACU010186/1-486 YGLENEGWFD PWCLLQGLRR KVQSMGVLFC HGEVTRFVSS SNHMETASGE 301 350 ENSP00000263578/1-486 AVVLKRIHEV HVKMDRSLEY QPVECAIVIN AAGAWSAQIA ALAGVGEGPP ENSBTAP00000030261/1-486 QLTLKRIHEV HVKMDHSQEF QPVECAIVVN AAGAWSGQIA ELAGVGNGPP ENSTTRP00000001469/1-486 KVTLKRIHEV HVKVDHSQEY QPVECAIVVN AAGAWSGRIA ELAGIGKGPS bmy_08496T0/1-527 KVTLKRIHEV HVKVDHSQEY QPVECAIVVN AAGAWSGRIA ELAGIGKGPP BACU010186/1-486 KVTLKRIHEV HVKVDHSQEY QPVECAIVVN AAGAWSGRIA ELAGIGKGPP 351 400 ENSP00000263578/1-486 GTLQGTKLPV EPRKRYVYVW HCPQGPGLET PLVADTSGAY FRREGLGSNY ENSBTAP00000030261/1-486 GTMQGTKLPV EPRKRYVYLW HCPQGPGLEA PLVADPSGAY FRREGLGNNY ENSTTRP00000001469/1-486 GTLQGTKLPV EPRKRYVYLW HCPQGPGLEA PLVADPSGAY FRREGLGNNY bmy_08496T0/1-527 GTLQGTKLPV EPRKRYVYLW HCPQGPGLEA PLVADPSGAY FRREGLGNNY BACU010186/1-486 GTLQGTKLPV EPRKRYVYLW HCPQGPGLEA PLVADPSGAY FRREGLGNNY 401 450 ENSP00000263578/1-486 LGGRSPTEQE EPDPANLEVD HDFFQDKVWP HLALRVPAFE TLKVQSAWAG ENSBTAP00000030261/1-486 VGSCSPTEEE EPDPGNLEVD YDFFQEKVWP RLAQRVPAFE TLKVRSAWAG ENSTTRP00000001469/1-486 LGGCSPAEEE EPDPGNLEVD HDFFQEKVWP HLAQRVPAFE TLKVRRAWAG bmy_08496T0/1-527 LGGCSPSEEE EPDPGNLEVD HDFFQEKVWP HLAWRVPAFE TLKVRRAWAG BACU010186/1-486 LGGCSPSEEE EPDPGNLEVD HAFFQEKVWP RLARRVPAFE ALKVRRAWAG 451 500 ENSP00000263578/1-486 YYDYNTFDQN GVVGPHPLVV NMYFATGFSG HGLQQAPGIG RAVAEMVLKG ENSBTAP00000030261/1-486 YYDYNTFDQN GVVGPHPLVV NMYFATGFSG HGLQQAPAVG RAVAEMVLEG ENSTTRP00000001469/1-486 YYDYNTFDQN GVVGPHPLVV NMYFATGFSG HGLQQAPAVG RAVAEMMLEG bmy_08496T0/1-527 YYDYNTFDQN GVVGPHPLVV NMYFATGFSG HGLQQAPAVG RAVAEVMLEG BACU010186/1-486 YYDYNTFDQN GVVGPHPLVI NMYFATGFSG HGLQQAPAVG RAVAEVMLEG 501 550 ENSP00000263578/1-486 RFQTIDLSPF LFTRFYLGEK IQENNII ENSBTAP00000030261/1-486 HFQTINLSPF LFSRFYFGEK AQEHCIL ENSTTRP00000001469/1-486 HFQTINLSPF LFSRFYLGEK AQEHCII bmy_08496T0/1-527 RFQTINLSPF LFSRFYLGEK AQERCII BACU010186/1-486 RFQTINLSPF LFSRFYLGEK AQERCII