KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:40:18 2014 Check: 00 .. Name: bmy_20185T0/1-507 Len: 645 Check: 3082 Weight: 1.00 Name: ENSP00000298251/1-416 Len: 645 Check: 9322 Weight: 1.00 Name: ENSBTAP00000030280/1-418 Len: 645 Check: 9530 Weight: 1.00 Name: BACU010208/1-545 Len: 645 Check: 9647 Weight: 1.00 Name: ENSTTRP00000012576/1-353 Len: 645 Check: 823 Weight: 1.00 // 1 50 bmy_20185T0/1-507 KGVGVRDDRG AEGPELQSKG KKEGLTGSEG PRRVRHGETR GLEDGSEVRS ENSP00000298251/1-416 ---------- ---------- ---------- MKRERGALSR ASRALRLAPF ENSBTAP00000030280/1-418 ---------- ---------- ---------- MKREREAPSR AFSALRLAPF BACU010208/1-545 ---------- ---------- ---------- MKREREALSR AFSALRLTPF ENSTTRP00000012576/1-353 ---------- ---------- ---------- MKREREALSR AFNALRLTPF 51 100 bmy_20185T0/1-507 QGLTLPSPRG SLFAEPLEGV NITSPVRLIH GTVGKAALLS VQYSSTSSDK ENSP00000298251/1-416 VYLLL----- -IQTDPLEGV NITSPVRLIH GTVGKSALLS VQYSSTSSDR ENSBTAP00000030280/1-418 VYLLL----- -IQTEPLEGV NITSPVRLIH GTVGKAALLS VQYSSTSSDK BACU010208/1-545 LYLLL----- -IQTEPLEGV NITSPVRLIH GTVGKAALLS VQYSSTSSDK ENSTTRP00000012576/1-353 LYLLL----- -IQTEPLEAV NITSPVRLIH GTVGKAALLS VQYSSTSSDK 101 150 bmy_20185T0/1-507 PVVKWQLKRD KPVTVVQSIG TEVIGTLRPD YRDRIRLFEN GSLLLSDLQL ENSP00000298251/1-416 PVVKWQLKRD KPVTVVQSIG TEVIGTLRPD YRDRIRLFEN GSLLLSDLQL ENSBTAP00000030280/1-418 PVVKWQLKRD KPVTVVQSIG TEVIGTLRPD YRDRIRLFEN GSLLLSDLQL BACU010208/1-545 PVVKWQLKRD KPVTVVQSIG TEVIGTLRPD YRDRIRLFEN GSLLLSDLQL ENSTTRP00000012576/1-353 PVVKWQLKRD KPVTVVQSIG TEVIGTLRPD YRDRIRLFEN GSLLLSDLQL 151 200 bmy_20185T0/1-507 ADEGTYEVEI SITDDTFTGE KTINLTVDVP ISRPQVLVAS TTVLELSEAF ENSP00000298251/1-416 ADEGTYEVEI SITDDTFTGE KTINLTVDVP ISRPQVLVAS TTVLELSEAF ENSBTAP00000030280/1-418 ADEGTYEVEI SITDDTFTGE KTINLTVDVP ISRPQVLVAS TTVLELSEAF BACU010208/1-545 ADEGTYEVEI SITDDTFTGE KTINLTVDVP ISRPQVLVAS TTVLELSEAF ENSTTRP00000012576/1-353 ADEGTYEVEI SITDDTFTGE KTINLTVDVP ISRPQVLVAS TTVLELSEAF 201 250 bmy_20185T0/1-507 TLNCSHENGT KPSYTWLKDG KPLLNDSRML LSPDQKVLTI TRVLMEDDDL ENSP00000298251/1-416 TLNCSHENGT KPSYTWLKDG KPLLNDSRML LSPDQKVLTI TRVLMEDDDL ENSBTAP00000030280/1-418 TLNCSHENGT KPSYTWLKDG KPLLNDSRML LSPDQKVLTI TRVLMEDDDL BACU010208/1-545 TLNCSHDNGT KPSYTWLKDG KPLLNDSRML LSPDQKVLTI TRVLMEDDDL ENSTTRP00000012576/1-353 TLNCSHENGT KPSYTWLKDG KPLLNDSRML LSPDQKVLTI TRVLMEDDDL 251 300 bmy_20185T0/1-507 YSCVVENPIS QGRSLPVKIT VYRRSSLYII LSTGGIFLLV TLVTVCACWK ENSP00000298251/1-416 YSCMVENPIS QGRSLPVKIT VYRRSSLYII LSTGGIFLLV TLVTVCACWK ENSBTAP00000030280/1-418 YSCVVENPIS QGRSPPVKIT VYRRSSLYII LSTGGIFLLV TLVTVCACWK BACU010208/1-545 YSCVVENPIS QGRSLPVKIT VYRRSSLYII LSTGGIFLLV TLVTVCACWK ENSTTRP00000012576/1-353 YSCVVENPIS EGRSLPVKIT VYRRSSLYII LSTGGIFLLV TLVTVCACWK 301 350 bmy_20185T0/1-507 PSKKSGKKRK LEKQNSLEYM DQNDDXLKAE GELPATHSPV PSSLRSVSCW ENSP00000298251/1-416 PSKR--KQKK LEKQNSLEYM DQNDDRLKPE ---------- ---------- ENSBTAP00000030280/1-418 PSKKSGKKRK LEKQNSMEYM DQSDDRLKPE ---------- ---------- BACU010208/1-545 PSKKSGKKRK LEKQNSLEYM DQNDDRLKAE ---------- ---------- ENSTTRP00000012576/1-353 PSRK--KKRK LEKQNSLEYM DQNDDRLKAE ---------- ---------- 351 400 bmy_20185T0/1-507 EKAEMGDKEA SSAGALPPPT ARRLQSRERS GQADTLPRSG EQERKNPMAL ENSP00000298251/1-416 ---------- ---------- ---------- --ADTLPRSG EQERKNPMAL ENSBTAP00000030280/1-418 ---------- ---------- ---------- --ADTLPRSG EQERKNPMAL BACU010208/1-545 ---------- ---------- ---------- --ADTLPRSG EQERKNPMAL ENSTTRP00000012576/1-353 ---------- ---------- ---------- --ADTLPRSG EQERKNPMAL 401 450 bmy_20185T0/1-507 YILKDKDSPE PEENPAPEPR SATEPGPPGY SVSPAVPGRS ---------- ENSP00000298251/1-416 YILKDKDSPE TEENPAPEPR SATEPGPPGY SVSPAVPGRS ---------- ENSBTAP00000030280/1-418 YILKDKDSPE PEENPASEPR SAAEPGPPGY SVSPAVPGRS ---------- BACU010208/1-545 YILKDKDSPE PEENPAPEPR STTEPGPPGY SVSPAVXXXX XXXXXXXXXX ENSTTRP00000012576/1-353 YILKDKDSPE PEENPAPEPR SATEPGPPGY SVSPAVPGRS ---------- 451 500 bmy_20185T0/1-507 ---------- ---------- ---------- ---------- ---------- ENSP00000298251/1-416 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000030280/1-418 ---------- ---------- ---------- ---------- ---------- BACU010208/1-545 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSTTRP00000012576/1-353 ---------- ---------- ---------- ---------- ---------- 501 550 bmy_20185T0/1-507 ---------- ---------- ---------- ---------- ---------- ENSP00000298251/1-416 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000030280/1-418 ---------- ---------- ---------- ---------- ---------- BACU010208/1-545 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSTTRP00000012576/1-353 ---------- ---------- ---------- ---------- ---------- 551 600 bmy_20185T0/1-507 ---------- ---------- --------PG LPGRSARRYP RSPARSPATG ENSP00000298251/1-416 ---------- ---------- --------PG LPIRSARRYP RSPARSPATG ENSBTAP00000030280/1-418 ---------- ---------- --------PG LPIRSARRYP RSPARSPATG BACU010208/1-545 XXXXXXXXXX XXXXXXXXXE GRGAREALTR REGSGVWTTV SMRRWGDAAG ENSTTRP00000012576/1-353 ---------- ---------- ---------- ---------- ---------- 601 650 bmy_20185T0/1-507 RTHTSPPRAP SSPGRSRSAS RTLRTAGGVH LIREQDEAGP VEISA ENSP00000298251/1-416 RTHSSPPRAP SSPGRSRSAS RTLRTA-GVH IIREQDEAGP VEISA ENSBTAP00000030280/1-418 RTHSSPPRAP GSPGRSRSAS RTLRTA-GVH LIREQDEAGP VEISA BACU010208/1-545 RLRVDPTVKP GYVC-SRLFS CVLSGC-GLC PFRTI----- ----- ENSTTRP00000012576/1-353 ---------P GL-------- ---------- ---------- -----