KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:40:38 2014 Check: 00 .. Name: ENSP00000357106/1-432 Len: 437 Check: 2628 Weight: 1.00 Name: ENSBTAP00000030478/1-396 Len: 437 Check: 9326 Weight: 1.00 Name: bmy_21798T0/1-363 Len: 437 Check: 8141 Weight: 1.00 Name: BACU003900/1-435 Len: 437 Check: 9921 Weight: 1.00 Name: ENSTTRP00000001757/1-430 Len: 437 Check: 6593 Weight: 1.00 // 1 50 ENSP00000357106/1-432 MGAPAASLLL LLLLFACCWA PGGANLSQDG YWQEQDLELG TLAPLDEAIS ENSBTAP00000030478/1-396 MGAPSA--LP LLLLFACCWA PGGANLSQD- ---------- ---------- bmy_21798T0/1-363 MET------- --------LS PG-------- YWQEQNLELG TLAPLEEAMS BACU003900/1-435 MGAPSA--LP LLLLFASCWA PGGANLSLDG YWQEQNLELG TLAPLEEAMS ENSTTRP00000001757/1-430 MGAPSA--LP LLLLFASCWA PGGANLSQDG YWQEQNLELG TLAPLEEAMS 51 100 ENSP00000357106/1-432 STVWSSPDML ASQDSQPWTS DETVVAGGTV VLKCQVKDHE DSSLQWSNPA ENSBTAP00000030478/1-396 ---------- ---DSQPWTS DETVVAGGTV VLKCQVKDHE DSSLQWSNPA bmy_21798T0/1-363 STVWSSPDML ASQDSQPWTS DETVVAGGTV VLKCQVKDHE DSSLQWSNPA BACU003900/1-435 STVWSSPDML ASQDSQPWTS DETVVAGGTV VLKCQVKDHE DSSLQWSNPA ENSTTRP00000001757/1-430 STVWSSPDML ASQDSQPWTS DETVVAGGTV VLKCQVKDHE DSSLQWSNPA 101 150 ENSP00000357106/1-432 QQTLYFGEKR ALRDNRIQLV TSTPHELSIS ISNVALADEG EYTCSIFTMP ENSBTAP00000030478/1-396 QQTLYFGEKR ALRDNRIQLV KSTPHELSIS ISNVALADEG EYTCSIFTMP bmy_21798T0/1-363 QQTLYFGEKR ALRDNRIQLV RSTPHELSIS ISNVALADEG EYTCSIFTMP BACU003900/1-435 QQTLYFGEKR ALRDNRIQLV RSTPHELSIS ISNVALADEG EYTCSIFTMP ENSTTRP00000001757/1-430 QQTLYFGEKR ALRDNRIQLV RSTPHELSIS ISNVALADEG EYTCSIFTMP 151 200 ENSP00000357106/1-432 VRTAKSLVTV LGIPQKPIIT GYKSSLREKD TATLNCQSSG SKPAARLTWR ENSBTAP00000030478/1-396 VRTAKSLVTV LGIPQKPIIS GYKSSLREKD KTTLSCQSSG SKPAAQLTWR bmy_21798T0/1-363 VRTAKSLVTV L--------- ---------- ---------- ---------- BACU003900/1-435 VRTAKSLVTV LGIPQKPIIT GYKSSLREKD TTTLNCQSSG SKPAAQLTWR ENSTTRP00000001757/1-430 VRTAKSLVTV LGIPQKPIIT GYKSSLREKD TTTLNCQSSG SKPAAQLTWR 201 250 ENSP00000357106/1-432 KGDQELHGEP TRIQEDPNGK TFTVSSSVTF QVTREDDGAS IVCSVNHESL ENSBTAP00000030478/1-396 KGDQELHGES TRIQEDPNGK TFTVSSSVTF QVTREDDGAD IVCSVNHESL bmy_21798T0/1-363 -------GEP TRIQEDPNGK TFTVSSSVTF QVTREDDGAD IVCSVNHESL BACU003900/1-435 KGDQELHGEP TRIQEDPNGK TFTVSSSVTF QVTREDDGAD IVCSVNHESL ENSTTRP00000001757/1-430 KGDQELHGEP TRIQEDPNGK TFTVSSSVTF QVTREDDGAD IVCSVNHESL 251 300 ENSP00000357106/1-432 KGADRSTSQR IEVL-----Y TPTAMIRPDP PHPREGQKLL LHCEGRGNPV ENSBTAP00000030478/1-396 KGADRSTAQR IEVL-----Y TPTAKIRPDP PHPREGQKLL LHCEGRGNPV bmy_21798T0/1-363 KGADRSTAQR IEVL-----Y TPTAKIRPDP PHPREGQKLL LHCEGRGNPA BACU003900/1-435 KGADRSTAQR IEVLCMSWAY TPTAKIRPDP PHPREGQKLL LHCEGRGNPA ENSTTRP00000001757/1-430 KGADRSTAQR IEVL-----Y TPTAKIRPDP PHPREGQKLL LHCEGRGNPA 301 350 ENSP00000357106/1-432 PQQYLWEKEG SVPPLKMTQE SALIFPFLNK SDSGTYGCTA TSNMGSYKAY ENSBTAP00000030478/1-396 PQQYVWEKEG SVPPLKMAQE SALIFPFLNK SDSGTYGCTA TSNMGSYKAY bmy_21798T0/1-363 PQQYLWEKEG SVPPLKMTQE SALIFPFLNK SDSGTYGCTA TSNMGSYKAY BACU003900/1-435 PQQYLWEKEG SVPPLKMTQE SALIFPFLNK SDSGTYGCTA TSNMGSYKAY ENSTTRP00000001757/1-430 PQQYLWEKEG SVPPLKMTQE SALIFPFLNK SDSGTYGCTA TSNMGSYKAY 351 400 ENSP00000357106/1-432 YTLNVNDPSP VPSSSSTYHA IIGGIVAFIV FLLLIMLIFL GHYLIRHKGT ENSBTAP00000030478/1-396 YTLNVNDPSP VPSSSSTYHA IIGGIVAFIV FLLLILLIFL GHYLIRHKGT bmy_21798T0/1-363 YTLNVNDPSP VPSSSSTYHA IIGGIVAFIV FLLLILLIFL GHYLIXHKGT BACU003900/1-435 YTLNVNDPSP VPSSSSTYHA IIGGIVAFIV FLLLILLIFL GHYLIRHKGT ENSTTRP00000001757/1-430 YTLNVNDPSP VPSSSSTYHA IIGGIVAFIV FLLLVLLIFL GHYLIRHKGT 401 450 ENSP00000357106/1-432 YLTHEAKGSD DAPDADTAII NAEGGQSGGD DKKEYFI ENSBTAP00000030478/1-396 YLTHEAKGSD DAPDADTAII NAEGGQSGGD DKKEYFI bmy_21798T0/1-363 YLTHEAKGSD DAPDADTAII NAEGGQSGGD DKKEYFI BACU003900/1-435 YLTHEAKGSD DAPDADTAII NAEGGQSGGD DKKEYFI ENSTTRP00000001757/1-430 YLTHEAKGSD DAPDADTAII NAEGGQSGGD DKKEYFI