KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:40:42 2014 Check: 00 .. Name: BACU017459/1-324 Len: 392 Check: 3654 Weight: 1.00 Name: ENSP00000267287/1-367 Len: 392 Check: 640 Weight: 1.00 Name: bmy_07102T0/1-211 Len: 392 Check: 2893 Weight: 1.00 Name: ENSBTAP00000030511/1-379 Len: 392 Check: 1888 Weight: 1.00 Name: ENSTTRP00000008039/1-373 Len: 392 Check: 4125 Weight: 1.00 // 1 50 BACU017459/1-324 MALNVAPVRD TKWLTLEVCR QFQRGTCSRS DEECKFAHPP KSCQVENGRV ENSP00000267287/1-367 MALNVAPVRD TKWLTLEVCR QFQRGTCSRS DEECKFAHPP KSCQVENGRV bmy_07102T0/1-211 ---------- --MLTL---- ---------- -----YAY-- ---------- ENSBTAP00000030511/1-379 MALNVAPVRD TKWLTLEVCR QFQRGTCSRS DEECKFAHPP KSCQVENGRV ENSTTRP00000008039/1-373 MALNVAPVRD TKWLTLEVCR QFQRGTCSRS DEECKFAHPP KSCQVENGRV 51 100 BACU017459/1-324 IACFDSLKGR CSRENCKYLH PPTHLKTQLE INGRNNLIQQ KTAAAMLAQQ ENSP00000267287/1-367 IACFDSLKGR CSRENCKYLH PPTHLKTQLE INGRNNLIQQ KTAAAMLAQQ bmy_07102T0/1-211 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000030511/1-379 IACFDSLKGR CSRENCKYLH PPTHLKTQLE INGRNNLIQQ KTAAAMLAQQ ENSTTRP00000008039/1-373 IACFDSLKGR CSRENCKYLH PPTHLKTQLE INGRNNLIQQ KTAAAMLAQQ 101 150 BACU017459/1-324 MQFMFPGTPL HPVPTFPVGP AIGTNTAISF APYLAPVTPG VGLVPTEILP ENSP00000267287/1-367 MQFMFPGTPL HPVPTFPVGP AIGTNTAISF APYLAPVTPG VGLVPTEILP bmy_07102T0/1-211 ---------- -------VCP AIGTNTAISF APYLAPVTPG VGLVPTEILP ENSBTAP00000030511/1-379 MQFMFPGTPL HPVPTFPVGP AIGTNTAISF APYLAPVTPG VGLVPTEILP ENSTTRP00000008039/1-373 MQFMFPGTPL HPVPTFPVGP AIGTNTAISF APYLAPVTPG VGLVPTEILP 151 200 BACU017459/1-324 TTPVIVPGSP PVTVPGSTAT QKLLRTDKLE VCREFQRGNC ARGETDCRFA ENSP00000267287/1-367 TTPVIVPGSP PVTVPGSTAT QKLLRTDKLE VCREFQRGNC ARGETDCRFA bmy_07102T0/1-211 TTPVIVPGSP PVTVPGSTAT QKLLRTDKLE VCREFQRGNC ARGETDCRFA ENSBTAP00000030511/1-379 TTPVIVPGSP PVTVPGSTAT QKLLRTDKLE VCREFQRGNC ARGETDCRFA ENSTTRP00000008039/1-373 TTPVIVPGSP PVTVPGSTAT QKLLRTDKLE VCREFQRGNC ARGETDCRFA 201 250 BACU017459/1-324 HPADSTMIDT NDNTVTVCMD YIKGRCMREK CKYFHPPAHL QAKIKAAQHQ ENSP00000267287/1-367 HPADSTMIDT SDNTVTVCMD YIKGRCMREK CKYFHPPAHL QAKIKAAQHQ bmy_07102T0/1-211 HPADSTMIDT NDNTVTVCMD YIKGRCMREK CKYFHPPAHL QAKIKAAQHQ ENSBTAP00000030511/1-379 HPADSTMVDT NDNSVTVCMD YIKGRCMREK CKYFHPPAHL QAKIKAAQHQ ENSTTRP00000008039/1-373 HPADSTMIDT NDNTVTVCMD YIKGRCMREK CKYFHPPAHL QAKIKAAQHQ 251 300 BACU017459/1-324 ANQAAVAAQA AR-------- ---------- ---------- ---RPRPQSW ENSP00000267287/1-367 ANQAAVAAQA AAAAATVM-- ---------- ------AFPP GALHPLPKRQ bmy_07102T0/1-211 ANQAAVAAQA AAAAATVM-- ---------- ------AFPP GALHPLPKRQ ENSBTAP00000030511/1-379 ANQAAVAAQA AAAAATVMTQ STAKAMKRPL EASVDLAFPP GALHPLPKRQ ENSTTRP00000008039/1-373 ANQAAVAAQA AAAAATVM-- ---------- ------AFPP GALHPLPKRQ 301 350 BACU017459/1-324 PF-------- LLVLFILYQR DKHLKKATVP APSLIPA--- ---------- ENSP00000267287/1-367 ALEKSNGTSA VFNPSVLHYQ QALTSAQLQQ HAAFIPTGSV LCMTPATSIV bmy_07102T0/1-211 ALEKSNGAST VFNPSVLHYQ QALTSAQLQQ HTAFIPT--- ---------- ENSBTAP00000030511/1-379 ALEKSNGAST VFNPSVLQYQ QALTSAQLQQ HTAFIPT--- ---------D ENSTTRP00000008039/1-373 ALEKSNGAST VFNPSVLHYQ QALTSAQLQQ HTAFIPTGSV LCMTPATSID 351 400 BACU017459/1-324 ---------- SCTTSKLSPV HSCSSTRHSF ------RQII LK ENSP00000267287/1-367 PM-------M HSATSATVSA ATTPATSVPF AATATANQII LK bmy_07102T0/1-211 ---------- ---------- EH-------- ---------- -- ENSBTAP00000030511/1-379 NSEIISRNGM ECQESALRIT KHCYCTYYPV PSSIELPQTA C- ENSTTRP00000008039/1-373 NSEIISRNGM ECQESALRIT KHCYCTYYPV SSSIELPQTA C-