KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:40:43 2014 Check: 00 .. Name: ENSTTRP00000008231/1-521 Len: 644 Check: 7570 Weight: 1.00 Name: BACU017758/1-644 Len: 644 Check: 9049 Weight: 1.00 Name: ENSP00000312244/1-521 Len: 644 Check: 651 Weight: 1.00 Name: ENSBTAP00000030520/1-520 Len: 644 Check: 2248 Weight: 1.00 Name: bmy_00894T0/1-522 Len: 644 Check: 8034 Weight: 1.00 // 1 50 ENSTTRP00000008231/1-521 MNASEGMKFK FHSGEKVLCF EPDPTKARVL YDAKIVDVIV GKDEKGRKIP BACU017758/1-644 MSASEGMKFK FHSGEKVLCF KPDPTKARVL YDAKIVDVIV GKDEKGRKIP ENSP00000312244/1-521 MSASEGMKFK FHSGEKVLCF EPDPTKARVL YDAKIVDVIV GKDEKGRKIP ENSBTAP00000030520/1-520 MSASEGMKFK FHSGEKVLCF EPDPTKARVL YDAKIVDVIV GKDEKGRKIP bmy_00894T0/1-522 MSASEGMKFK FHSGEKVLCF EPDPTKARVL YDAKIVDVIV GKDEKGRKIP 51 100 ENSTTRP00000008231/1-521 EYLIHFNGWN RSWDRWAAED HVLRDTDENR RLQRKLARKA VARLRSTGRK BACU017758/1-644 EYLIHFNGWN RSWDRWAAED HVLRDTDENR RLQHKLARKA VARLRSTGRK ENSP00000312244/1-521 EYLIHFNGWN RSWDRWAAED HVLRDTDENR RLQRKLARKA VARLRSTGRK ENSBTAP00000030520/1-520 EYLIHFNGWN RSWDRWAAED HVLRDTDENR RLQRKLAKKA VARLRSTGRK bmy_00894T0/1-522 EYLIHFNGWN RSWDRWAAED HVLRDTDENR RLQRKLARKA VARLRSTGRK 101 150 ENSTTRP00000008231/1-521 RKR------- ---------- ---------- ---------- ---------- BACU017758/1-644 RKRCRLPGVD SDWRTWNLVC DVIVDVIVGK DEKGRKIPEY LIHFNGWNRR ENSP00000312244/1-521 KKR------- ---------- ---------- ---------- ---------- ENSBTAP00000030520/1-520 RKR------- ---------- ---------- ---------- ---------- bmy_00894T0/1-522 RKR------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000008231/1-521 ---------C RLPGVDSVLK SLPAEEKDEN VENXXXXXXX -XXXXXXXXX BACU017758/1-644 RSTGRKRKRC RLPGVDSVLK SLPAEEKDEN VENSISSSSD DSSEEKDEEI ENSP00000312244/1-521 ---------C RLPGVDSVLK GLPTEEKDEN DENSLSSSSD -CSENKDEEI ENSBTAP00000030520/1-520 ---------C RLPGVDSVLK SLPADEKDEN DENSISSSSD --SEEKDGEI bmy_00894T0/1-522 ---------C RLPGVDSVLK SLPAEEKDEN VENSISSSSD DSSEEKDEEI 201 250 ENSTTRP00000008231/1-521 XXXXXXXXXX XXKEEPELHA KKEMEERTIA IEIPEVLKKK LEDDCYYINR BACU017758/1-644 SEESDIEEKT EVKEEPELHA KKEMEERTIT IEIPEVLKKK LEDDCYYINR ENSP00000312244/1-521 SEESDIEEKT EVKEEPELQT RREMEERTIT IEIPEVLKKQ LEDDCYYINR ENSBTAP00000030520/1-520 SEEGDTEEKT EVKEGPELHT KKEMEERTIT IEIPDVLKKK LEDDCYYINR bmy_00894T0/1-522 SEESDIEEKT EVKEEPELHA KKEMEERTIT IEIPEVLKKK LEDDCYYINR 251 300 ENSTTRP00000008231/1-521 RKRLVKLPCQ TNIITILESY VKHFAINAAF SANERPRHHH TMPHANMNVH BACU017758/1-644 RKRLVKLPCQ TNIITILESY VKHFAINAAF SANERPRHHH AMPHANMNVH ENSP00000312244/1-521 RKRLVKLPCQ TNIITILESY VKHFAINAAF SANERPRHHH VMPHANMNVH ENSBTAP00000030520/1-520 RKRLVKLPCQ TNIITILESY VKHFAINAAF SANERPRHHH VIPHANMNVH bmy_00894T0/1-522 RKRLVKLPCQ TNIITILESY VKHFAINAAF SANERPRHHH AMPHANMNVH 301 350 ENSTTRP00000008231/1-521 YIPAEKNVDL CKEMVDGLRI TFXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU017758/1-644 YIPAEKNVDL CKEMVDGLRI TFDYTLPLVL LYPYEQVQYK KVTSSKFFLP ENSP00000312244/1-521 YIPAEKNVDL CKEMVDGLRI TFDYTLPLVL LYPYEQAQYK KVTSSKFFLP ENSBTAP00000030520/1-520 YIPAEKNVDL CKEMVDGLRI TFDYTLPLVL LYPYEQVQYK KVTSSKFFLP bmy_00894T0/1-522 YIPAEKNVDL CKEMVDGLRI TFDYTLPLVL LYPYEQVQYK KVTSSKFFLP 351 400 ENSTTRP00000008231/1-521 XXXXXXXXXX NPEELSPSPP LLNPSTPQSA ESQPTTGEPA TPKRRKAEPE BACU017758/1-644 IKESTTNANR SQEELSPSPP LLNPSTPQST ESQPTTGEPA TPKRRKAEPE ENSP00000312244/1-521 IKESATSTNR SQEELSPSPP LLNPSTPQST ESQPTTGEPA TPKRRKAEPE ENSBTAP00000030520/1-520 IKESTTSTNR NQEELSPSPP LLNPSTPQST ESQPTSGEPT TPKRRKGEPE bmy_00894T0/1-522 IKESTTNTNR SQEELSPSPP LLNPSTPQST ESQPTTGEPA TPKRRKAEPE 401 450 ENSTTRP00000008231/1-521 ALQSLRRSTR HSANCDRLSE SSASPQPKRR QQDASASMPK LFLHLEKKTP BACU017758/1-644 ALQSLRRSTR HSANCDRLSE SSASPQPKRR QQDASASMPK LFLHLEKKTP ENSP00000312244/1-521 ALQSLRRSTR HSANCDRLSE SSASPQPKRR QQDTSASMPK LFLHLEKKTP ENSBTAP00000030520/1-520 AFQSLRRSTR HSANCDRLSE SSASPQPKRR QQDTSASMPK LFLHLEKKTP bmy_00894T0/1-522 ALQSLRRSTR HSANCDRLSE SSASPQPKRR QQDASASMPK LFLHLEKKTP 451 500 ENSTTRP00000008231/1-521 VHSRSSSPVP LTPSKEGSAV FAGFEGRRTN EINEVLSWKL VPDSYPPGDQ BACU017758/1-644 VHSRSSSPVP LTPSKEGSAV FAGFEGRRTN EINEVLSWKL VPDSYPPGDQ ENSP00000312244/1-521 VHSRSSSPIP LTPSKEGSAV FAGFEGRRTN EINEVLSWKL VPDNYPPGDQ ENSBTAP00000030520/1-520 VHSRSSSPVP LTPSKEGSAV FAGFEGRRTN EINEVLSWKL VPDSYPPGDQ bmy_00894T0/1-522 VHSRSSSPVP LTPSKEGSAV FAGFEGRRTN EINEVLSWKL VPDSYPPGDQ 501 550 ENSTTRP00000008231/1-521 PPPPSYIYGA QHLLRLFVKL PEILGKMSFS EKNLKALLKH FDLFL----- BACU017758/1-644 PPPPSYIYGA QHLLRLFVKL PEILGKMSFS EKNLKALLKH FDLFLSPPLL ENSP00000312244/1-521 PPPPSYIYGA QHLLRLFVKL PEILGKMSFS EKNLKALLKH FDLFL----- ENSBTAP00000030520/1-520 PPPPSYIYGA QHLLRLFVKL PEILGKMSFS EKNLKALLKH FDLFL----- bmy_00894T0/1-522 PPPPSYIYGA QHLLRLFVKL PEILGKMSFS EKNLKALLKH FDLFL----- 551 600 ENSTTRP00000008231/1-521 ---------- ---------- ---RFLAEYH DDFFPESAYV AACE------ BACU017758/1-644 NPSTPQSTES QPTTGEPATP KRRKAEPEAL QSLRRSTRHS ANCDRLSESS ENSP00000312244/1-521 ---------- ---------- ---RFLAEYH DDFFPESAYV AACE------ ENSBTAP00000030520/1-520 ---------- ---------- ---RFLAEYH DDFFPESAYV AACE------ bmy_00894T0/1-522 ---------- ---------- ---RFLAEYH DDFFPESAYV AACE------ 601 650 ENSTTRP00000008231/1-521 ---------- ---------- --------AH YSTKNPRAIY ---- BACU017758/1-644 ASPQPKRRQQ DASASMPKLF LHLEKKTPVH SRSSSPVPLT QTAT ENSP00000312244/1-521 ---------- ---------- --------AH YSTKNPRAIY ---- ENSBTAP00000030520/1-520 ---------- ---------- --------AH YSTKNPRAIY ---- bmy_00894T0/1-522 ---------- ---------- --------AH YSTKNPRAIY ----