KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:40:47 2014 Check: 00 .. Name: ENSP00000349805/1-297 Len: 301 Check: 8031 Weight: 1.00 Name: ENSTTRP00000004804/1-291 Len: 301 Check: 6205 Weight: 1.00 Name: ENSBTAP00000030567/1-294 Len: 301 Check: 3963 Weight: 1.00 Name: bmy_18810T0/1-299 Len: 301 Check: 9323 Weight: 1.00 Name: BACU002706/1-288 Len: 301 Check: 3170 Weight: 1.00 // 1 50 ENSP00000349805/1-297 MTMESREMDC YLRRLKQELM SMKEVGDGLQ DQMNCMMGAL QELKLLQVQT ENSTTRP00000004804/1-291 MRKKSREMDC YLRRLKQELM SMKEVGDGLQ DQMNCMMGAL QELKLLQVQT ENSBTAP00000030567/1-294 -------MDC YLRRLKQELM SMKEVGDGLQ DQMNCMMGAL QELKLLQVQT bmy_18810T0/1-299 MRKKSREMDC YLRRLKQELM SMKEVGDGLQ DQMNCMMGAL QELKLLQVQT BACU002706/1-288 -------MDC YLRRLKQELM SMKEVGDGLQ DQMNCMMGAL QELKLLQVQT 51 100 ENSP00000349805/1-297 ALEQLEISGG GPVPGSPEGP RTQCEHPCWE GGRGPARPTV CSPSSQPSLG ENSTTRP00000004804/1-291 ALEQLEISGG GPAPGCPESP RTQLEPPQWE AGSGPA-PAG CSPSSQPALG ENSBTAP00000030567/1-294 ALEQLEISGG GPAPGSPESP WTQLEPPQWE GSRGPVRPGA CSPSNQASLG bmy_18810T0/1-299 ALEQLEISGG GPAPGCPESP RTQLEPPQWE GGSGPARPAG CSPSSQPSLG BACU002706/1-288 ALEQLEISGG SPAPGCPESP RTQLEPPQWE GGSGPARPAG CFPSSQPSLG 101 150 ENSP00000349805/1-297 --SSTKFPSH RSVCGRDLAP LPRTQ--PHQ SCAQQGPERV EPDDWTSTLM ENSTTRP00000004804/1-291 --SSAKLPSP -SVCGRDLAP PPRTRLPE-Q SCAQRGPELV EPDDWTXXXX ENSBTAP00000030567/1-294 STSSGKFPSH RSVCGRELAT PPRTPLPEPQ PSAQQGPELA EPDDWTSTLM bmy_18810T0/1-299 --SSAKLPSP RSVCGRDLAP PPRTRLPEHQ SCAQRGPELV EPDDWTSTLM BACU002706/1-288 --SSAKLPSP RSVCGRDLAP PPRTRLPEHQ SCAQRGPELV EPDDWTSTLM 151 200 ENSP00000349805/1-297 SRGRNRQPLV LGDNVFADLV GNWLDLPELE KGGEKGETGG AREPKGEKGQ ENSTTRP00000004804/1-291 XXXXXXXXXX XXXXXXXXXX XXXXXXXE-- -GWEKGETRE AGPPKEG-GP ENSBTAP00000030567/1-294 SRGRNRQPLV LGDNVFADLV GNWLDLPELE KGGEKGETGE AGEPKGGRGQ bmy_18810T0/1-299 SRGRNRQPLV LGDNVFADLV GNWLDLPELE KGGEKGETRE AGAPKGGRGQ BACU002706/1-288 SRGRNRQPLV LGDNVFADLV GNWLDLPEL- ---EKGETRE AGAPKGGRGQ 201 250 ENSP00000349805/1-297 PQELGRRFAL TANIFKKFLR SVRPDRDRLL KEKPGWVTPM VPESRTGRSQ ENSTTRP00000004804/1-291 PRELGRRFAL TANIFRKFLR SVRPDRDRLL KE-LGWVTLT AYEPRAGRLQ ENSBTAP00000030567/1-294 PRELGRRFAL TANIFRKFLR SVRPDRDRLL KEKPGWVTPT ASEPRAGRSQ bmy_18810T0/1-299 PRELGRRFAL TANIFRKFLR SVRPDRDRLL KEKPGWVTPT ASEPRAGRLQ BACU002706/1-288 PRELGRRFAL TANIFRKFLR SVRPDRDRLL KEKPGWVTPT ASEPRAGRLQ 251 300 ENSP00000349805/1-297 KVKKRSLSKG SGHFPFPGTG EHRRGENPPT SCPKALEHSP SGFDINTAVW ENSTTRP00000004804/1-291 KGKKRGHFKG SGHCPFPGAS EPRRGENPST SCPKALESSP SGFDVNTAVW ENSBTAP00000030567/1-294 KVKKRSHSKG SGHCPFPGAS EPRRGENAST GCPKALESSP SGFDINTAVW bmy_18810T0/1-299 KGKKRGHSKG SGHCPFPGAS EPRRGENPST SCPKALESSP SGFDVNTAVW BACU002706/1-288 KGKKRGHSKG SGHCPFPGAS EPRRGENPST SCPKALESSP SGFDVNTAVW 301 350 ENSP00000349805/1-297 V ENSTTRP00000004804/1-291 V ENSBTAP00000030567/1-294 V bmy_18810T0/1-299 V BACU002706/1-288 V