KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:40:48 2014 Check: 00 .. Name: BACU008924/1-552 Len: 552 Check: 2362 Weight: 1.00 Name: ENSP00000431391/1-524 Len: 552 Check: 8614 Weight: 1.00 Name: bmy_10492T0/1-480 Len: 552 Check: 7923 Weight: 1.00 Name: ENSTTRP00000011032/1-504 Len: 552 Check: 8022 Weight: 1.00 Name: ENSBTAP00000030612/1-482 Len: 552 Check: 9563 Weight: 1.00 // 1 50 BACU008924/1-552 MPTVEELYRN YGILADATEQ VGQHKDAYQV ILDGVKGGTK EKRLAAQFIP ENSP00000431391/1-524 MPTVEELYRN YGILADATEQ VGQHKDAYQV ILDGVKGGTK EKRLAAQFIP bmy_10492T0/1-480 MPTVEELYRN YGILADATEQ VGQHKDAYQV ILDGVKGGTK EKRLAAQFIP ENSTTRP00000011032/1-504 MPTVEELYRN YGILADATEQ VGQHKDAYQV ILDGVKGGTK EKRLAAQFIP ENSBTAP00000030612/1-482 ---------- ---------- --QHKDAYQV ILDGVKGGTK EKRLAAQFIP 51 100 BACU008924/1-552 KFFKHFPELA DSAINAQLDL CEDEDVSIRR QAIKELPQFA TGENLPRVAD ENSP00000431391/1-524 KFFKHFPELA DSAINAQLDL CEDEDVSIRR QAIKELPQFA TGENLPRVAD bmy_10492T0/1-480 KFFKHFPELA DSAINAQLDL CEDEDVSIRR QAIKELPQFA TGENLPRVAD ENSTTRP00000011032/1-504 KFFKHFPELA DSAINAQLDL CEDEDVSIRR QAIKELPQFA TGENLPRVAD ENSBTAP00000030612/1-482 KFFKHFPELA DSAINAQLDL CEDEDVSIRR QAIKELPQFA TGENLPRVAD 101 150 BACU008924/1-552 ILTQLLQTDD SAEFNLVNNA LLSIFKMDAK GTLGGLFSQI LQGEDIVRER ENSP00000431391/1-524 ILTQLLQTDD SAEFNLVNNA LLSIFKMDAK GTLGGLFSQI LQGEDIVRER bmy_10492T0/1-480 ILTQLLQTDD SAEFNLVNNA LLSIFKMDAK GTLGGLFSQI LQGEDIVRER ENSTTRP00000011032/1-504 ILTQLLQTDD SAEFNLVNNA LLSIFKMDAK GTLGGLFSQI LQGEDIVRER ENSBTAP00000030612/1-482 ILTQLLQTDD SAEFNLVNNA LLSIFKMDAK GTLGGLFSQI LQGEDIVRER 151 200 BACU008924/1-552 AIKFLSTKLK TLPDEVLTKE VEELILTESK KVLEDVTGEE FVLFMKILSG ENSP00000431391/1-524 AIKFLSTKLK TLPDEVLTKE VEELILTESK KVLEDVTGEE FVLFMKILSG bmy_10492T0/1-480 AIKFLSTKLK TLPDEVLTKE VEELILTESK KVLEDVTGEE FVLFMKILSG ENSTTRP00000011032/1-504 AIKFLSTKLK TLPDEVLTKE VEELILTESK KVLEDVTGEE FVLFMKILSG ENSBTAP00000030612/1-482 AIKFLSTKLK TLPDEVLTKE VEELILTESK KVLEDVTGEE FVLFMKILSG 201 250 BACU008924/1-552 LKSLQTVSGR QQLVELVAEQ ADLEQTFNPS DPDCVDRLLQ CTRQAVPLFS ENSP00000431391/1-524 LKSLQTVSGR QQLVELVAEQ ADLEQTFNPS DPDCVDRLLQ CTRQAVPLFS bmy_10492T0/1-480 LKSLQTVSGR QQLVELVAEQ ADLEQTFNPS DPDCVDRLLQ CTRQAVPLFS ENSTTRP00000011032/1-504 LKSLQTVSGR QQLVELVAEQ ADLEQTFNPS DPDCVDRLLQ CTRQAVPLFS ENSBTAP00000030612/1-482 LKSLQTVSGR QQLVELVAEQ ADLEQTFNPS DPDCVDRLLQ CTRQAVPLFS 251 300 BACU008924/1-552 KNVHSTRFVT YFCEQVLPNL SSLTTPVEGL DIQLEVLKLL AEMSSFCGDM ENSP00000431391/1-524 KNVHSTRFVT YFCEQVLPNL GTLTTPVEGL DIQLEVLKLL AEMSSFCGDM bmy_10492T0/1-480 KNVHSTRFVT YFCEQVLPNL SSLTTPVEGL DIQLE----- ---------- ENSTTRP00000011032/1-504 KNVHSTRFVT YFCEQVLPNL SSLTTPVEGL DIQLEVLKLL AEMSSFCGDM ENSBTAP00000030612/1-482 KNVHSTRFVT YFCEQVLPNL SSLTTPVEGL DIQLEVLKLL AEMSSFCGDM 301 350 BACU008924/1-552 EKLETNLRKL FDKLLEYMPL PPEEAENGEN AGNEEPKLQF SYVECLLYSF ENSP00000431391/1-524 EKLETNLRKL FDKLLEYMPL PPEEAENGEN AGNEEPKLQF SYVECLLYSF bmy_10492T0/1-480 ---------- -----EYMPL PPEEAENGEN AGNEEPKLQF SYVECLLYSF ENSTTRP00000011032/1-504 EKLETNLRKL FDKLLEYMPL PPEEAENGEN AGNEEPKLQF SYVECLLYSF ENSBTAP00000030612/1-482 EKLETNLRKL FDKLLEYMPL PPEEAENGEN AGNEEPKLQF SYVECLLYSF 351 400 BACU008924/1-552 HQLGRKLPDF LTAKLNAEKL KDFKIRLQYF ARGLQVYIRQ LRLALQGKTG ENSP00000431391/1-524 HQLGRKLPDF LTAKLNAEKL KDFKIRLQYF ARGLQVYIRQ LRLALQGKTG bmy_10492T0/1-480 HQLGRKLPDF LTAKLNAEKL KDFKIRLQYF ARGLQVYIRQ LRLALQGKTG ENSTTRP00000011032/1-504 HQLGRKLPDF LTAKLNAEKL KDFKIRLQYF ARGLQVYIRQ LRLALQGKTG ENSBTAP00000030612/1-482 HQLGRKLPDF LTAKLNAEKL KDFKIRLQYF ARGLQVYIRQ LRLALQGKTG 401 450 BACU008924/1-552 EALKTEENKI KVVALKITNN INVLIKDLFH IPPSYKSTVT LSWKPVQKVE ENSP00000431391/1-524 EALKTEENKI KVVALKITNN INVLIKDLFH IPPSYKSTVT LSWKPVQKVE bmy_10492T0/1-480 EALKTEENKI KVVALKITNN INVLIKDLFH IPPSYKSTVT LSWKPVQKVE ENSTTRP00000011032/1-504 EALKTEENKI KVVALKITNN INVLIKDLFH IPPSYKSTVT LSWKPVQKVE ENSBTAP00000030612/1-482 EALKTDENKI KVVALKITNN INVLIKDLFH IPPSYKSTVT LSWKPVQKVE 451 500 BACU008924/1-552 IGQKRANEDT TSGSPPKKSS AXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000431391/1-524 IGQKRASEDT TSGSPPKKSS AGPKRDARQI YNPPSGKYSS NLGNFNYEQR bmy_10492T0/1-480 IGQKRANEDT TSGSPPKKSS AGPKRDARQI YNPPSGKYSS NLGNFNYGER ENSTTRP00000011032/1-504 IGQKRANEDT TSGSPPKKSS AGPKRDARQI YNPPSGKYSS NLGNFNY-ER ENSBTAP00000030612/1-482 LGQKRATEDT TSGSPPKKSS AGPKRDARQI YNPPSGKYSS NLSNFNY-ER 501 550 BACU008924/1-552 XXMPGRFIIL LVGNIAAIWA TLIMSREEPS GEVEVAEVGE HEEIVVGEDS ENSP00000431391/1-524 GAFRGSRGGR GWGTRGNRSR GRLY------ ---------- ---------- bmy_10492T0/1-480 -FRLGTSSMR D--------- ---------- ---------- ---------- ENSTTRP00000011032/1-504 -SLQGK---- ---------- ---------- ---------- ---------- ENSBTAP00000030612/1-482 -SLQGK---- ---------- ---------- ---------- ---------- 551 600 BACU008924/1-552 TE ENSP00000431391/1-524 -- bmy_10492T0/1-480 -- ENSTTRP00000011032/1-504 -- ENSBTAP00000030612/1-482 --