KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:40:50 2014 Check: 00 .. Name: ENSTTRP00000015531/1-92 Len: 122 Check: 5257 Weight: 1.00 Name: ENSP00000273590/1-103 Len: 122 Check: 8850 Weight: 1.00 Name: ENSBTAP00000030636/1-106 Len: 122 Check: 424 Weight: 1.00 Name: bmy_06008T0/1-122 Len: 122 Check: 5302 Weight: 1.00 Name: BACU020438/1-93 Len: 122 Check: 8826 Weight: 1.00 // 1 50 ENSTTRP00000015531/1-92 MAEPWSGQSL QALPATVLGA LGALGSEFLL EWEAQDMRVT LFKLLLLWLV ENSP00000273590/1-103 MAESWSGQAL QALPATVLGA L---GSEFLR EWEAQDMRVT LFKLLLLWLV ENSBTAP00000030636/1-106 MAEPWSGQSL QALPATVLGA LGALGSEFLR EWEAQDMRVT LFKLLLFWLV bmy_06008T0/1-122 MAESWSGQSL QALPATVLGA LGALGSEFLL EWEAQDMRVT LFKLLLLWLV BACU020438/1-93 MAEPWSGQSL QALPATVLGA LGALGSEFLL EWEAQDMRVT LFKLLLLWLV 51 100 ENSTTRP00000015531/1-92 LSFQSIQLEW GLGWSTVTGL YHG------- ---------A GLGGQNGSTP ENSP00000273590/1-103 LSLLGIQLAW GFYGNTVTGL YHR------- ---------P GLGGQNGSTP ENSBTAP00000030636/1-106 LSLLSIQLAW GFYGSTVTGL YHR------- ---------P GLGGQNGSTP bmy_06008T0/1-122 LSLLSIQLAW GFYGSTVTGL YHRPDTHPQL AAALDVFLPP GLGGQNGSTP BACU020438/1-93 LSLLSIQLAW GFYGSTVTGL YHR------- ---------P GLGGQNGSTP 101 150 ENSTTRP00000015531/1-92 DGSTHFPS-- ---------- -- ENSP00000273590/1-103 DGSTHFPSWE MAANEPLKTH RE ENSBTAP00000030636/1-106 DGSTHFPSWE TAANEPLKTH RE bmy_06008T0/1-122 DGSTHFPSWE TAANEPLKTH RE BACU020438/1-93 DGSTHFPSW- ---------- --