KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:40:54 2014 Check: 00 .. Name: ENSP00000295571/1-443 Len: 527 Check: 70 Weight: 1.00 Name: bmy_01245T0/1-355 Len: 527 Check: 5538 Weight: 1.00 Name: ENSBTAP00000030725/1-527 Len: 527 Check: 6789 Weight: 1.00 Name: ENSTTRP00000014497/1-526 Len: 527 Check: 5099 Weight: 1.00 // 1 50 ENSP00000295571/1-443 MLMLFVFGVL LHEVSLSGQN EAPPNTHSIP GEPLYNYASI RLPEEHIPFF bmy_01245T0/1-355 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000030725/1-527 MFMLLVFGAL LPEVPLSGQD KAPPQADGIS ATPLFNYASL RLPEEHIPFF ENSTTRP00000014497/1-526 MFMLLVFGAL LHEVPLSGQD EVPPQADGIL GAPLFNYASL RLPEEHIPFF 51 100 ENSP00000295571/1-443 LHNNRHIATV CRKDSLCPYK KHLEKLKYCW GYEKSCKPEF RFGYPVCSYV bmy_01245T0/1-355 ---------- ---------- ---------- -MEENCTK-- ---------- ENSBTAP00000030725/1-527 LHNNRHIATV CRKDSHCPYK KYLENLKYCW GYEKSCRPEF RFGYPVCTYV ENSTTRP00000014497/1-526 LHNNRHIAMV CKKDSHCPYK KHLENLKYCW GYEKSCRPEF RFSYPVCTYV 101 150 ENSP00000295571/1-443 DMGWTDTLES AEDIFWKQAD FGYARERLEE MHVLCQPKET SDSSLVCSRY bmy_01245T0/1-355 ---WLPKLFS EKQTFFSSGK HS-------- ---------- ------CLLF ENSBTAP00000030725/1-527 DMGWTDTLES AQEIFWKQAD FGYAAERLEE LHVLCQPKEK NDSSLVCSRY ENSTTRP00000014497/1-526 DMGWTDTLES AQEIFWKQAD FGYSGERLEE LHVLCQPKGM NDSSLVCSRY 151 200 ENSP00000295571/1-443 LQYCRATNLY LDLRNIKRNH DRFKEDFFQS GEIGGHCKLD IRTLTSEGQR bmy_01245T0/1-355 F--------- ---------- ---------- ---------- ---------- ENSBTAP00000030725/1-527 LQYCRATNIY LDLRNIKRNH DRFKEDFVQS GEIGGYCKLD IRSLMSQGQR ENSTTRP00000014497/1-526 LQYCRATNLY LDLRNIKRNH DRFKEDFFQS GEIGGHCKLD IRMLMSQGQR 201 250 ENSP00000295571/1-443 KSPLQSWFAE LQSYTQLNFR PIEDAKCDIV IEKPTYFMKL DAGVNMYHHF bmy_01245T0/1-355 ---LGTWFAE LQSYTQLNFR PVEDAKCDIV IEKPTYFMKL DAGVNMYHHF ENSBTAP00000030725/1-527 KSPLQSWFAE LQSYTELNFR PVEDAQCDIV IEKPTYFMKL DAGVNMYHHF ENSTTRP00000014497/1-526 KSPLQSWFAE LQSYTQLNFR PVEDAKCDIV IEKPTYFMKL DAGVNMYHHF 251 300 ENSP00000295571/1-443 CDFINLYITQ HVNNSFSTDV YIVMWDT--- ---------- ---------- bmy_01245T0/1-355 CDFINLYITQ HINNSFSTDV HVVMWDTSSY GYGDLFSDTW KAFTDYDVIH ENSBTAP00000030725/1-527 CDFINLYITQ HVNNSFSTDV YVVMWDTSSY GYGDLFSDTW KAFTDYDVIH ENSTTRP00000014497/1-526 CDFINLYITQ HINNSFSTDV HVVMWDTSSY GYGDLFSDTW KAFTDYDVIH 301 350 ENSP00000295571/1-443 ---------- ---------- ---------- ---------- ---------- bmy_01245T0/1-355 LKTYDSKRVC FKEAIFSLLP RMRYGLFYNT PLISGCQNTG LFRAFSQHVL ENSBTAP00000030725/1-527 LKTYDAKRVC FKEAIFSLLP RMRYGLFYNT PLISGCQNTG LFRAFSQHVL ENSTTRP00000014497/1-526 LKTYDSKRVC FKEAVFSLLP RMRYGLFYNT PLISGCQNTG LFRAFSQHVL 351 400 ENSP00000295571/1-443 ---------- -DGKIRVTIL ARSTEYRKIL NQNELVNALK TVSTFEVQIV bmy_01245T0/1-355 HRLNITQEGP KDGKIRVTIL ARSTEYRKIL NQNELVNALK TVSTFEVQIV ENSBTAP00000030725/1-527 HRLNITQEGP KGGKIRVTIL ARSTEYRKIL NQNELVNALK TVSTFEVQIV ENSTTRP00000014497/1-526 HRLNITQEGP KDGKIRVTIL ARSTEYRKIL NQNELV-ALK TVSTFEVQIV 401 450 ENSP00000295571/1-443 DYKYRELGFL DQLRITHNTD IFIGMHGAGL THLLFLPDWA AVFELYNCED bmy_01245T0/1-355 DYKYKELGFL DQLRITHNTD IFIGMHGAGL THLLFLPDWA AVFELYNCGD ENSBTAP00000030725/1-527 DYKYKELGFL DQLRITHNTD IFIGMHGAGL THLLFLPDWA AVFELYNCGD ENSTTRP00000014497/1-526 DYKYKELGFL DQLRITHNTD IFIGMHGAGL THLLFLPDWA AVFELYNCGD 451 500 ENSP00000295571/1-443 ERCYLDLARL RGVHYITWRR QNKVFPQDKG HHPTLGEHPK FTNYSFDVEE bmy_01245T0/1-355 ERCYLDLARL RGVYYITWRR QSKVFPQDKG HHPTLGEHPK FTNYSFDVEE ENSBTAP00000030725/1-527 ERCYLDLARL RGVHYITWRR QNKVFPQDKG HHPTLGEHPK FTNYSFDVEE ENSTTRP00000014497/1-526 ERCYLDLARL RGVHYITWRR QSKVFPQDKG HHPTLGEHPK FTNYSFDVEE 501 550 ENSP00000295571/1-443 FMYLVLQAAD HVLQHPKWPF KKKHDEL bmy_01245T0/1-355 FMYLVLQAAD HVLQHPKWPF KKKHDEL ENSBTAP00000030725/1-527 FMYLVLQAAD YVLQHPKWPF KKKHDEL ENSTTRP00000014497/1-526 FMYLVLQAAD HVLQHPKWPF KKKHDEL