KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:40:58 2014 Check: 00 .. Name: ENSBTAP00000030798/1-478 Len: 507 Check: 4491 Weight: 1.00 Name: ENSP00000386845/1-471 Len: 507 Check: 3426 Weight: 1.00 Name: bmy_16515T0/1-255 Len: 507 Check: 6721 Weight: 1.00 Name: BACU014063/1-506 Len: 507 Check: 3839 Weight: 1.00 Name: ENSTTRP00000006447/1-472 Len: 507 Check: 4722 Weight: 1.00 // 1 50 ENSBTAP00000030798/1-478 ---------- -----MNMAT FLRGFEEKGI KNDRPEDQLS KEKKKILFSF ENSP00000386845/1-471 ---------- -----MNMAN FLRGFEEKGI KNDRPEDQLS KEKKKILFSF bmy_16515T0/1-255 ---------- ---------- ---------- ---------- -------MSF BACU014063/1-506 MKYSLSPDNY PEDGIMNMAT FLRGFEDKGI KNDRPEDQLS KEKKKILFSF ENSTTRP00000006447/1-472 ---------- -----MNMAT FLRGFEDKGI KNDRPEDQLS KEKKKILFSF 51 100 ENSBTAP00000030798/1-478 CEVCNIQLNS AAQAQVHYNG KSHRKRVKQL SDGQPSSPAQ GSGPPPPASP ENSP00000386845/1-471 CEVCNIQLNS AAQAQVHSNG KSHRKRVKQL SDGQPPPPAQ -------ASP bmy_16515T0/1-255 ---------- ---------- ---------- ---------- ---------- BACU014063/1-506 CEVCNIQLNS AAQAQVHYNG KSHRKRVKQL SDGQPLPPAQ GSG-PPLASP ENSTTRP00000006447/1-472 CEVCNIQLNS AAQAQVHYNG KSHRKRVKQL SDGQPPPPAQ -------ASP 101 150 ENSBTAP00000030798/1-478 STHTSTGSTC HTTTLPALVR TPTLMMQPSL DIKPFMSFPV DSNS-AVGLF ENSP00000386845/1-471 SSNSSTGSTC HTTTLPALVR TPTLMMQPSL DIKPFMSFPV DSSS-AVGLF bmy_16515T0/1-255 ---------- ---------- ---------- ----FLT--- ---------- BACU014063/1-506 STFTSTGSTC HSTTLPALVH TPTLMMQPSL DIKPFMSFPV DSNSAAVGLF ENSTTRP00000006447/1-472 STYTSTGSTC HSTTLPALVR TPTLMMQPSL DIKPFMSFPV DSNSAAVGLF 151 200 ENSBTAP00000030798/1-478 PNFNT----- --------MD PVQKAVINHT FGVSIPPKKK QVISCNVCQL ENSP00000386845/1-471 PNFNT----- --------MD PVQKAVINHT FGVSIPPKKK QVISCNVCQL bmy_16515T0/1-255 ---------- ---------- ---------- ---------- ---------- BACU014063/1-506 PNFNTKRRGL FGTNKFCQMD PVQKAVINHT FGVSIPPKKK QVISCNVCQL ENSTTRP00000006447/1-472 PNFNT----- --------MD PVQKAVINHT FGVSIPPKKK QVISCNVCQL 201 250 ENSBTAP00000030798/1-478 RFNSDSQAEA HYKGSKHAKK VKALEATKNK PKMVSSKDSA KANPSCSITP ENSP00000386845/1-471 RFNSDSQAEA HYKGSKHAKK VKALDATKNK PKMVPSKDSA KANPSCSITP bmy_16515T0/1-255 ---------- ---------- ---------- ---------- ---------- BACU014063/1-506 RFNSDSQAEA HYKGSKHAKK VKALEATKNK PKMVSSKDSA KANPSCSITP ENSTTRP00000006447/1-472 RFNSDSQAEA HYKGSKHAKK VKALEATKNK PKMVSSKDSA KANPSCSITP 251 300 ENSBTAP00000030798/1-478 ITGNNSDKSE EKGKLKGSIS NQVSSSEGGL FLPKPGTAAL PPAAATSPSK ENSP00000386845/1-471 ITGNNSDKSE DKGKLKASSS SQPSSSESGS FLLKSGTTPL PPGAATSPSK bmy_16515T0/1-255 --------KK DKGKLKVSSS SQASSSEGGS FLLKPGTTPL PPGAATSPSK BACU014063/1-506 ITGNNSDKSE DKGKLKVSSS SQASSSEGGS FLLKPGTTPL PPGAATSPSK ENSTTRP00000006447/1-472 ITGNNSDKSE DKGKLKVSSS SQASSSEGGS FLLKPGTTPL PPGAATSPSK 301 350 ENSBTAP00000030798/1-478 STNGAPGTVS ESEEEKAKKL LYCSLCKVAV NSLSQLEAHN TGSKHKTMVE ENSP00000386845/1-471 STNGAPGTVV ESEEEKAKKL LYCSLCKVAV NSLSQLEAHN TGSKHKTMVE bmy_16515T0/1-255 STNGAPGTVS ESEEEKAKKL LYCSLCKVAV NSLSQLEAHN TGSKHKTMVE BACU014063/1-506 STNGAPGTVS ESEEEKAKKL LYCSLCKVAV NSLSQLEAHN TGSKHKTMVE ENSTTRP00000006447/1-472 STNGAPGTVS ESEEEKAKKL LYCSLCKVAV NSLSQLEAHN TGSKHKTMVE 351 400 ENSBTAP00000030798/1-478 ARNGAGPIKS YPRPGSRLKM QNGSKGSGLQ NKTFHCEICD VHVNSEIQLK ENSP00000386845/1-471 ARNGAGPIKS YPRPGSRLKM QNGSKGSGLQ NKTFHCEICD VHVNSEIQLK bmy_16515T0/1-255 ARNGAGPIKS YPRPGSRLKM QNGSKGSGLQ NKTFHCEICD VHVNSEIQLK BACU014063/1-506 ARNGAGPIKS YPRPGSRLKM QNGSKGSGLQ NKTFHCEICD VHVNSEIQLK ENSTTRP00000006447/1-472 ARNGAGPIKS YPRPGSRLKM QNGSKGSGLQ NKTFHCEICD VHVNSEIQLK 401 450 ENSBTAP00000030798/1-478 QHISSRRHKD RVAGKPLKPK YSPYNKLQRS PSILAAKLAF QKDMMKPLAP ENSP00000386845/1-471 QHISSRRHKD RVAGKPLKPK YSPYNKLQRS PSILAAKLAF QKDMMKPLAP bmy_16515T0/1-255 QHISSRRHKD RVAGKPLKPK YSPYNKLQRS PSILAAKLAF QKDMMKPLAP BACU014063/1-506 QHISSRRHKD RVAGKPLKPK YSPYNKLQRS PSILAAKLAF QKDMMKPLAP ENSTTRP00000006447/1-472 QHISSRRHKD RVAGKPLKPK YSPYNKLQRS PSILAAKLAF QKDMMKPLAP 451 500 ENSBTAP00000030798/1-478 AFLSSPLAAA AAVSSALSLP PRPSASLFQA AAIPPALLRP GHGPIRATPA ENSP00000386845/1-471 AFLSSPLAAA AAVSSALSLP PRPSASLFQA PAIPPALLRP GHGPIRATPA bmy_16515T0/1-255 AFLSSPLAAA AAVSSALSLP PRPSASLFQA PAIPPALLRP GHGPIRATPA BACU014063/1-506 AFLSSPLAAA AAVSSALSLP PRPSASLFQA PAIPPALLRP GHGPIRATPA ENSTTRP00000006447/1-472 AFLSSPLAAA AAVSSALSLP PRPSASLFQA PAIPPALLRP GHGPIRATPA 501 550 ENSBTAP00000030798/1-478 SILFAPY ENSP00000386845/1-471 SILFAPY bmy_16515T0/1-255 SILFAPY BACU014063/1-506 SILFAPY ENSTTRP00000006447/1-472 SILFAPY