KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:40:58 2014 Check: 00 .. Name: ENSP00000369419/1-459 Len: 470 Check: 2250 Weight: 1.00 Name: ENSBTAP00000030808/1-470 Len: 470 Check: 1912 Weight: 1.00 Name: ENSTTRP00000005857/1-458 Len: 470 Check: 2525 Weight: 1.00 Name: bmy_19837T0/1-469 Len: 470 Check: 9186 Weight: 1.00 Name: BACU003748/1-417 Len: 470 Check: 3046 Weight: 1.00 // 1 50 ENSP00000369419/1-459 MEKTCIDALP LTMNSSEKQE TVCIFGTGDF GRSLGLKMLQ CGYSVVFGSR ENSBTAP00000030808/1-470 MEKTSTDASP LTMYSSEKQE TVCIFGTGDF GRSLGLKMLQ CGYSIVFGSR ENSTTRP00000005857/1-458 MEKT-TDVLL LTTNSSEKQD TVCIFGTGDF GRSLGLEMLQ CGYSIVFGSR bmy_19837T0/1-469 MEKT-TDVLP LTMNSSEKQE TVCIFGTGDF GRSLGLEMLQ CGYSIVFGSR BACU003748/1-417 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000369419/1-459 NPQKTTLLPS GAEVLSYSEA AKKSGIIIIA IHREHYDFLT ELTEVLNGKI ENSBTAP00000030808/1-470 TPGMSSLLPN DAEVMSYSDA AQKSDIIIIT IHREHYDFLT ELTEVLKGKI ENSTTRP00000005857/1-458 NPQMSSLLPN GAEVLSYSEA AQKSDIIIIA IHREHYDFLT ELTEALNGKI bmy_19837T0/1-469 NPRMSSLLPN GAEVLSYSEA AQKSDIIIIA IHREHYDFLT ELTEVLNGKI BACU003748/1-417 ---MSSLLPN GAEVLSYSEA AQKSDIIIIA IHREHYDFLT ELTEVLNGKI 101 150 ENSP00000369419/1-459 LVDISNNLKI NQYPESNAEY LAHLVPGAHV VKAFNTISAW ALQSGALDAS ENSBTAP00000030808/1-470 LVDVSNNLKI NQYPESNAEY LAQLVPGTHV VKAFNTISAW ALQSGALDAS ENSTTRP00000005857/1-458 LVDVSNNLKI KQYPQSNAEY LAQLVPGAHV VKAFNTISAW ALQSRALDAS bmy_19837T0/1-469 LVDVSNNLKI KQYPESNAEY LAQLVPGAQV VKAFNTISAW ALQSRALDAS BACU003748/1-417 LVDVSNNLKI KQYPESNAEY LAQLVPGAHV VKAFNTISAW ALQSRALDAS 151 200 ENSP00000369419/1-459 RQVFVCGNDS KAKQRVMDIV RNLGLTPMDQ GSLMAAKEIE KYPLQLFPMW ENSBTAP00000030808/1-470 RQVFICGNDS KAKQRVMDVV RSLGLTPLDK GSLMAANEME NYPLQLFPMW ENSTTRP00000005857/1-458 RQVFVCGNDS KAKQRVMDIV RSLGLTPLDK GSLMAANEIE NYPLQLFPMW bmy_19837T0/1-469 RQVFVCGNDS KAKQRVMDIV RSLGLTPLDK GSLMAANEIE NYPLQLFPMW BACU003748/1-417 RQVFVCGNDS KAKQRVMDIV RSLGLTPLDK GSLMAANEIE NYPLQLFTMW 201 250 ENSP00000369419/1-459 RFPFYLSAVL CVFLFFYCVI RDVIYPYVYE KKDNTFRMAI SIPNRIFPIT ENSBTAP00000030808/1-470 RFPFYLSAVL CVFFFFYCVI REVIYPYVYE KRDRTFRLPI SIPNRVFPIA ENSTTRP00000005857/1-458 KFPFYLSAVL CVFFFSYCVI REVIYPYVYE KKDRTFRLAI SIPNRVFPIA bmy_19837T0/1-469 KFPFYLSAVL CVFFFFYCVI REVIYPYVYG KKDRTFRLAI SIPNRVFPIA BACU003748/1-417 KFPFYLSAVL CVFFFFYCVI REVIYPYVYE KKDRTFRLAI SIPNRVFPIA 251 300 ENSP00000369419/1-459 ALTLLALVYL PGVIAAILQL YRGTKYRRFP DWLDHWMLCR KQLGLVALGF ENSBTAP00000030808/1-470 ALTLLALVYL PGVIAAILQL YRGTKYRRFP DWLDHWMLCR KQLGLIALGF ENSTTRP00000005857/1-458 ALTLLALVYL PGVIAAILQL YQGTKYCRFP DWLDHWMLCR KQLGLIALGF bmy_19837T0/1-469 ALTLLALVYL PGVIAAILQL YRGTKYRRFP DWLDHWMLCR KQLGLIALGF BACU003748/1-417 ALTLLALVYL PGVIAAILQL YRGTKYRRFP DWLDHWMLCR KQLGLIALGF 301 350 ENSP00000369419/1-459 AFLHVLYTLV IPIRYYVRWR LGNLTVTQAI LKKENPFSTS SAWLSDSYVA ENSBTAP00000030808/1-470 AFLHVLYTLV IPIRYYVRWT SNNRTITQVI TKKENPFSTT NSWLSDSYIA ENSTTRP00000005857/1-458 AFLHVLYTLV IPIRYYVRWT WTNRTIAQAI AKKESPFSTS TAWLSDSYIA bmy_19837T0/1-469 AFLHVLYTLV IPIRYYVRWT LTNRTIAQAI AKKESPFSTS TAWLSDSYVA BACU003748/1-417 AFLHVLYTLV IPIRYYVRWT WTNRTIAQAI AKKESPFSTS TAWLSDSYVA 351 400 ENSP00000369419/1-459 LGILGFFLFV LLGITSLPSV SNAVNWREFR FVQSKLGYLT LILCTAHTLV ENSBTAP00000030808/1-470 LGMLGFFLFV LLGITSLPSV SNMVNWREFR FVQSKLGYLT LILCTAHTLV ENSTTRP00000005857/1-458 MGMLGFFLFV LLGITSLPSV SNMVNWREFR FVQSKLGYLT LILCTAHTLV bmy_19837T0/1-469 MGMLGFFLFV LLGITSLPSV SNMVNWREFR FVQSKLGYLT LILCTAHTLV BACU003748/1-417 MGMLGFFLFV LLGITSLPSV SNMLNWREFR FVQSKLGYLT LILCTAHTLV 401 450 ENSP00000369419/1-459 YGGKRFLSPS NLRWYLPAAY VLGLIIPCTV LVIKFVLIMP CVDNTLTRIR ENSBTAP00000030808/1-470 YGGKRFLNPS NLVWYLPSAY VIALIIPCTV LVIKFILILP CIDKTLMRIR ENSTTRP00000005857/1-458 YGGKRFLSPS SLVWYLPSAY VIALIIPCTV LVIKFILILP CIDKTLTRIR bmy_19837T0/1-469 YGGKRFLSPS SLIWYLPSAY VIALIIPCTV LVIKFILILP CIDKTLTRIR BACU003748/1-417 YGGKRFLSPS SLVWYLPSAY VIALIIPCTV LVIKFILILP CIDKTLTRIH 451 500 ENSP00000369419/1-459 QGWERNSKH- ---------- ENSBTAP00000030808/1-470 QGWERNPKYS ESSLNGKTDI ENSTTRP00000005857/1-458 KGWERNPKF- ---------- bmy_19837T0/1-469 KGWERNPKFS ESXLNGKTDI BACU003748/1-417 EGWERNPKFS ESALNGKTDI