KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:40:59 2014 Check: 00 .. Name: bmy_19541T0/1-526 Len: 883 Check: 8845 Weight: 1.00 Name: ENSTTRP00000008914/1-848 Len: 883 Check: 4796 Weight: 1.00 Name: BACU000185/1-171 Len: 883 Check: 6490 Weight: 1.00 Name: ENSP00000360076/1-828 Len: 883 Check: 7479 Weight: 1.00 Name: ENSBTAP00000030815/1-852 Len: 883 Check: 5939 Weight: 1.00 // 1 50 bmy_19541T0/1-526 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008914/1-848 MMEGLKKRTR KAFGIRKKEK DTDSTGSPDR DGIQGKKKTQ KTQLLLTSCF BACU000185/1-171 MMEGLKKRTR KAFGIRKKEK DTDSTGSPDR DGI------- ---------- ENSP00000360076/1-828 MMEGLKKRTR KAFGIRKKEK DTDSTGSPDR DGI------- ---------- ENSBTAP00000030815/1-852 -MEGLKKRTR KAFGIRKKEK DTDSTGSPDR DGIQGKKKTQ KTQLLLTSCF 51 100 bmy_19541T0/1-526 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008914/1-848 WLRALSLTLS ---------- ---------- ----QKKSNG APNGFYAEID BACU000185/1-171 ---------- -QPSPHEPPY NNKAECAREG GKKVSKKSNG APNGFYAEID ENSP00000360076/1-828 ---------- -QPSPHEPPY NSKAECAREG GKKVSKKSNG APNGFYAEID ENSBTAP00000030815/1-852 WLRAFSLTLS QQPSPHEPPY NNKAECAREG GKKVSKKSNG APNGFYAEID 101 150 bmy_19541T0/1-526 -----MPTLL EEK------- ---------- ---------- ---------- ENSTTRP00000008914/1-848 WERYNSPELD EEGYSIRPEE PGSTKGKHFY SSSESEEEEE SHKKFNIKIK BACU000185/1-171 WERYNSPELD EEGYSIRPEE PGSTKGKHFY SSSESEEEEE SHKKFNIKIK ENSP00000360076/1-828 WERYNSPELD EEGYSIRPEE PGSTKGKHFY SSSESEEEEE SHKKFNIKIK ENSBTAP00000030815/1-852 WERYNSPELD EEGYSIRPEE PGSTKGKHFY SSSESEEEEE SHKKFNIKIK 151 200 bmy_19541T0/1-526 ---------- ---------- ---------- ---------- ------SGEE ENSTTRP00000008914/1-848 PLQAKDILKN AATVDELKAS IGNIALSPSP V--------G AIKRNLSSEE BACU000185/1-171 PLQAKDILKN AATVDELKAS IGNIALSPSP V--------- ---------- ENSP00000360076/1-828 PLQSKDILKN AATVDELKAS IGNIALSPSP VRKSPRRSPG AIKRNLSSEE ENSBTAP00000030815/1-852 PLQAKDILKN AATVDELKAS IGNIALSPSP VRKSPRRSPG AIKRNLSSEE 201 250 bmy_19541T0/1-526 VARPRRSTPT PELISRKPPD DTMALAPLFG PPLESAFDEQ KTE------- ENSTTRP00000008914/1-848 IARPRRSTPT PELISRKPPD DTMALAPLFG PPLESAFDEQ KTEVLLDQPE BACU000185/1-171 ---------- ---------- ---------- ---------- ---------- ENSP00000360076/1-828 VARPRRSTPT PELISKKPPD DTTALAPLFG PPLESAFDEQ KTEVLLDQPE ENSBTAP00000030815/1-852 VARPRRSTPT PELISKKPSE DTTALAPLFG PPLESAFDEQ KTEVLLDQPE 251 300 bmy_19541T0/1-526 ---------- ---------- ---------- ---------- ---------G ENSTTRP00000008914/1-848 IWGPGQPVNP STESPKLTRP FPTGTPPPLP PKHVPATPPR TGSPLTTGPG BACU000185/1-171 ---------- ---------- ---------- ---------- ---------- ENSP00000360076/1-828 IWGSGQPINP SMESPKLTRP FPTGTPPPLP PKNVPATPPR TGSPLTIGPG ENSBTAP00000030815/1-852 IWGPGQPINP SVESPKLTRP FPTGTPPPLP PKNVPATPPR TGSPLTVGPG 301 350 bmy_19541T0/1-526 NDQSATEVKI EKLPSINDLD SIFGPVLSPK SVAVNAEEKW VHFSDTSPER ENSTTRP00000008914/1-848 NDQAATEVKI EKLPSINDLD SIFGPVLSPK SVAVNAEEKW VHFSDTSPER BACU000185/1-171 ---------- ---------- ---------- ---------- ---------- ENSP00000360076/1-828 NDQSATEVKI EKLPSINDLD SIFGPVLSPK SVAVNAEEKW VHFSDTSPEH ENSBTAP00000030815/1-852 NDQSATEVKI EKLPSINDLD SIFGPVLSPK SVAVNAEDKW VHFSDTSPER 351 400 bmy_19541T0/1-526 VTPELTPREK VVSPPAASDN PAESP---PP GPPGPPGPPG PLSPPRNVPS ENSTTRP00000008914/1-848 VTPELTPREK VVSPPAASDN PADSP---PL GPPGPPGPPG PPSPPRNVPS BACU000185/1-171 ---------- ---------- ---------- ---------- ---------- ENSP00000360076/1-828 VTPELTPREK VVSPPATPDN PADSPAPGPL GPPGPTGPPG PPGPPRNVLS ENSBTAP00000030815/1-852 VTPELTPREK VVSPPAASDN PADSP---PP GPPGPPGPSG PPGPPRSVPS 401 450 bmy_19541T0/1-526 PLNLEEVQKK VAEQAFIKDD YLETISSPKD LGLGQRATPP APPPPTYRTV ENSTTRP00000008914/1-848 PLNLEEVQKK VAEQAFIKDD YLETISSPKD LGLGQRATPP APPPPTYRTV BACU000185/1-171 ---------- ---------- ---------- ---------- ---------- ENSP00000360076/1-828 PLNLEEVQKK VAEQTFIKDD YLETISSPKD FGLGQRATPP PPPPPTYRTV ENSBTAP00000030815/1-852 PLNLEEVQKK VAEQNFIKDD YLETISSPKD FGLGQRATPP PPPPPTYRTV 451 500 bmy_19541T0/1-526 VSSPGPGSGS GTGTT----- ---------- ---------- ---------- ENSTTRP00000008914/1-848 VSSPGPGSGS GTGTTSDRKT KALGCLVICP SLQAAGGRLD SSSGASSPAR BACU000185/1-171 ---------H GTG------- ---------- ---------- ---------- ENSP00000360076/1-828 VSSPGPGSGP GPGTT----- ---------- ---------- --SGASSPAR ENSBTAP00000030815/1-852 VSSPGPGSGS GTGIT----- ---------- ---------- --SGASSPAR 501 550 bmy_19541T0/1-526 ---------- ---------- ---------S VSEDDVFYDK LPSFERRCET ENSTTRP00000008914/1-848 PATPLVLCST TTPPPPPPRP PSRPKLPPGK PGVGDVPRPF SPPIHSSSPP BACU000185/1-171 ---------- ---------- ---------- ---------- ---------- ENSP00000360076/1-828 PATPLVPCRS TTPPPPPPRP PSRPKLPPGK PGVGDVSRPF SPPIHSSSPP ENSBTAP00000030815/1-852 PATPLVPCSS TTPPPPPPRP PSRPKLPPGK PGIGDVPRPF SPPIHSSSPP 551 600 bmy_19541T0/1-526 P--------- ---------- ---------- ---------- -------AGS ENSTTRP00000008914/1-848 PIAPLARAES TSSISSTNSL SAATTPTVEN EQPSLVWFDR GKFYLTFEGS BACU000185/1-171 ---------- ---------- ---------- ---------- ---------- ENSP00000360076/1-828 PIAPLARAES TSSISSTNSL SAATTPTVEN EQPSLVWFDR GKFYLTFEGS ENSBTAP00000030815/1-852 PIAPLARAES TSSISSTNSL SAATTPTVEN EQPSLVWFDR GKFYLTFEGS 601 650 bmy_19541T0/1-526 SRGPSPLTMG AQDTLPVAAA FTETVNAYFK GADPSKCIVK ITGEMVLSFP ENSTTRP00000008914/1-848 SRGPSPLTMG AQDTLPVAAA FTETVNAYFK GADPSKCIVK ITGEMVLSFP BACU000185/1-171 ---------- ---------- ---------- ---------- ---------- ENSP00000360076/1-828 SRGPSPLTMG AQDTLPVAAA FTETVNAYFK GADPSKCIVK ITGEMVLSFP ENSBTAP00000030815/1-852 SRGPSPLTMG AQDTLPVAAA FTETVNAYFK GADPSKCIVK ITGEMVLSFP 651 700 bmy_19541T0/1-526 AGITRHFANN PSPAALTFRV TNFSRLEHVL PNPQLLCCDN TQNDANAKEF ENSTTRP00000008914/1-848 AGITRHFANN PSPAALTFRV TNFSRLEHVL PNPQLLCXXX XXXXXXXXXX BACU000185/1-171 -GIKRSF--- ---------- ------QRVM KN-------- ---------- ENSP00000360076/1-828 AGITRHFANN PSPAALTFRV INFSRLEHVL PNPQLLCCDN TQNDANTKEF ENSBTAP00000030815/1-852 AGITRHFANN PSPAALTFRV INFSRLEHVL PNPQLLCCDN TQNDANAKEF 701 750 bmy_19541T0/1-526 WVNMPNLMIH LKKVSEQKPQ ATYYNVDMLK YQVSAQGIQS TPLNLAVNWR ENSTTRP00000008914/1-848 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXVSAQGIQS TPLNLAVNWR BACU000185/1-171 ---------- ---------- ---------- ---------- ---------- ENSP00000360076/1-828 WVNMPNLMTH LKKVSEQKPQ ATYYNVDMLK YQVSAQGIQS TPLNLAVNWR ENSBTAP00000030815/1-852 WVNMPNLMTH LKKVSEQKPQ ATYYNVDMLK YQVSAQGIQS TPLNLAVNWR 751 800 bmy_19541T0/1-526 CEPASTDLRI DYKYNTDAMT TAVALNNVQF LVPIDGGVTK LQAVLPPAVW ENSTTRP00000008914/1-848 CEPASTDLRI DYKYNTDAMT TAVALNNVQF LVPIDGGVTK LQAVLPPAVW BACU000185/1-171 ---------- ---------- ---------- ---------- ---------- ENSP00000360076/1-828 CEPSSTDLRI DYKYNTDAMT TAVALNNVQF LVPIDGGVTK LQAVLPPAVW ENSBTAP00000030815/1-852 CEPASTDLRI DYKYNTDAMT TAVALNNVQF LVPVDGGVTK LQAVLPPAVW 801 850 bmy_19541T0/1-526 NAEQHRILWK IPDISQKSEN GGVGSLLARF QLSEGPSKPS PLVVQFTSEG ENSTTRP00000008914/1-848 NAEQHRILWK IPDISQKSEN GGVGSLLARF QLSEGPSKPS PLVVQFTSEG BACU000185/1-171 ---------- ---------- ---------- ---------- ---------- ENSP00000360076/1-828 NAEQQRILWK IPDISQKSEN GGVGSLLARF QLSEGPSKPS PLVVQFTSEG ENSBTAP00000030815/1-852 NADQQRILWK IPDISQKSEN GGVGSLLARF QLSEGPSKPS PLVVQFTSEG 851 900 bmy_19541T0/1-526 STLSGCDIEL VGAGYRFSLI KKRFAAGKYL ADN ENSTTRP00000008914/1-848 STLSGCDIEL VGAGYRFSLI KKRFAAGKYL ADN BACU000185/1-171 ---------- ---------- ---------- -NN ENSP00000360076/1-828 STLSGCDIEL VGAGYRFSLI KKRFAAGKYL ADN ENSBTAP00000030815/1-852 STLSGCDIEL VGAGYRFSLI KKRFAAGKYL ADN