KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:41:00 2014 Check: 00 .. Name: ENSTTRP00000006138/1-491 Len: 641 Check: 3286 Weight: 1.00 Name: ENSP00000406027/1-607 Len: 641 Check: 816 Weight: 1.00 Name: bmy_15541T0/1-599 Len: 641 Check: 3268 Weight: 1.00 Name: ENSBTAP00000030822/1-608 Len: 641 Check: 8682 Weight: 1.00 // 1 50 ENSTTRP00000006138/1-491 ---------- ----TPLFPI -STVSFLVL- ---------- --LQLLLSPG ENSP00000406027/1-607 MWMTPKRSKM EVDEALVFRP EWTQRYLVVE PPEGDGALCL VCRRLIVATR bmy_15541T0/1-599 ---------M EIDESRGFRA EWTQRYLVVE PPEGEGALCL VCRRLVVATG ENSBTAP00000030822/1-608 MWMTPKRSKM EIDESRAFRA EWTQRYLVVE PPEGEGALCL VCRRLVAATG 51 100 ENSTTRP00000006138/1-491 P-------ET EPSLWQQLVS FREAVTFEDV TRD-----KC QETSQKDCSR ENSP00000406027/1-607 ERDVRRHYEA EHEYYERYVA DGERAALVER LRQGDLP-VA SFTPEERAAR bmy_15541T0/1-599 EPDVRHHYEA EHDYYERYVA EGERAALVER LRQGDLPEAA PLTPEERAAR ENSBTAP00000030822/1-608 ELDVKQHYEA EHEYYERYVT EDERAALVER LRRGDFPEAA PLTPEQRIAR 101 150 ENSTTRP00000006138/1-491 GTM------- LDSCKKPVPQ RSFFQFSMMP QRAGNDPPGV SNPSEMEKEI ENSP00000406027/1-607 AGLGLCRLLA LKGRGWGEGD FVYQCMEVLL REVLPEHVSV LQGVDLSPDI bmy_15541T0/1-599 AGLGLARLLA LKGCGWGEGD FVHRCMEVML RDVLPDHVSV LNGIDLSPEI ENSBTAP00000030822/1-608 AGLGLARLLA LKGCGWGEGD FVHRCMAVML RDVLPDHVGI MDGIDLSPET 151 200 ENSTTRP00000006138/1-491 SNMREKFLIS VTKLVESKSY NS----KVFS K--------- -EKY------ ENSP00000406027/1-607 TRQR---ILS IDRNLRNQLF NRARDFKAYS LALDDQAFVA YENYLLVFIR bmy_15541T0/1-599 TRQR---VLD INQNLRSQLF NRAKDFKAYS LALDDQAFVA YENYLLVFVR ENSBTAP00000030822/1-608 TRQR---VLD IHQNLRSQLF NRAKDFKAYS LALDDQAFVA YENYLLVFVR 201 250 ENSTTRP00000006138/1-491 -----FQTIK EVKEAKEKGR KSSRDYRRAA KYDVISVQG- -TEKLIEATH ENSP00000406027/1-607 GVGPELEVQE DLLTIINLTH HFSVGALMSA ILESLQTAGL SLQRMVGLTT bmy_15541T0/1-599 GVGHDLEVQE ELLTIINLTH HFSVGALMAA ILEALQTAGL SLQRMVGLTT ENSBTAP00000030822/1-608 GVGHDLEVHE ELLTIINLTH HFSVGALMAA ILEALQTAGL SLQRMVGLTT 251 300 ENSTTRP00000006138/1-491 -------GER DRIRYYVHKE EL----FDIL HDTHLSIGHG GRTRMLKELQ ENSP00000406027/1-607 THTLRMIGEN SGLVSYMREK AVSPNCWNVI H-------YS GFLHL--ELL bmy_15541T0/1-599 THTLRMIGEN SGLVSYMREK AVSPNCWNVI H-------YS GFLHL--ELL ENSBTAP00000030822/1-608 THTLRMIGEN SGLVSYMREK AVSPNCWNVI H-------YS GFLHL--ELL 301 350 ENSTTRP00000006138/1-491 GKYGNVTKEV IVL---YLTL CKQCHQKNPV SKRGLAPKPM PFKD-IDSRC ENSP00000406027/1-607 SSYDVDVNQI INTISEWIVL IKTRGVRRPE FQTLLTESES EHGERVNGRC bmy_15541T0/1-599 SSYDVDVNQI VNAISEWIVL IKTRGVRRPE FQALLTESES EHGERVNGRC ENSBTAP00000030822/1-608 SSYDVDVNQI INAVSEWIVL IKTRGVRRPE FQALLTESES EHGERVNGRC 351 400 ENSTTRP00000006138/1-491 QVE------- ---ILDMQSN ADG------- ---------- --EFKFILYY ENSP00000406027/1-607 LNNWLRRGKT LKLIFSLRKE MEAFLVSVGA TTVHFSDKQW LCDFGFLVDI bmy_15541T0/1-599 LNNWLRKGKT LKLIFSLRKE IKTFLVSIGA TTVHFTDKEW LCDFGFLVDI ENSBTAP00000030822/1-608 LNNWLRKGKT LKLIFSLRKE IETFLVSIGA TTVHFTDKEW LCDFGFLVDI 401 450 ENSTTRP00000006138/1-491 QDHL---TKF IILRPLKATE AHEMISVLSD IFTILGTPTM LESDSGLEFT ENSP00000406027/1-607 MEHLRELSEE LRVSKVFAAA AFDHICTFEV KLNLFQRHIE EKNLTDFPAL bmy_15541T0/1-599 MDYLRELSEL LRVSKVFAAA AFDHICAFEV KLNLLQRHIE EKNLTHFVAL ENSBTAP00000030822/1-608 MDHLREISEL LRVSKVFAAA AFDHICAFEV KLNLLQRQVE EKNLTHFASL 451 500 ENSTTRP00000006138/1-491 NQVVNELNEV WPDLKIV--P GRYHP--GQG QGSLERASRD VKNM-----L ENSP00000406027/1-607 REVVDELKQQ NKEDEKIFDP DRYQMVICRL QKEFERHFKD LRFIKKDLEL bmy_15541T0/1-599 SQVVDELKGH LQEDEKILDP DRYRVVICRL QKEFERHFKD LKFIKKDLEL ENSBTAP00000030822/1-608 SQVVDELKEN LQEDEKVLDL ERYRAVICRL QKEFERHFKD LKFIKKDLEL 501 550 ENSTTRP00000006138/1-491 SAWMQSHHSH HWAEGLRFMQ LVRNQA---- ---------- -FDVSLQQSP ENSP00000406027/1-607 FSNPFNFKPE YAPISVR-VE LTKLQANTNL WNEYRIKDLG QFYAGLSAES bmy_15541T0/1-599 FANPFSFKPE YAPISVR-VE LTKLQANTNL WNEYRTKDLG XFYAGLSAES ENSBTAP00000030822/1-608 FANPFSFKPE YAPISVR-VE LTKLQASANL WEEYRTKDLG QFYAGLPAES 551 600 ENSTTRP00000006138/1-491 YEAMFG--CK AKFGLYSSHL PRETVSVLQT EEEL---EIA EEQLESSLWI ENSP00000406027/1-607 YPIIKGVACK VASLFDSNQI CEKAFSYLTR NQHTLSQPLT DEHLQALFRV bmy_15541T0/1-599 YPIIKGVACK VASLFDSSKI CEKAFSYLTR NQHTLSQPLT DEHLHALFRI ENSBTAP00000030822/1-608 YPIIKGVACK VASLFDSSKI CEKAFSYLTR NQHTLSQPLT DEHLHALFRI 601 650 ENSTTRP00000006138/1-491 RQEERAEVGA DRSDMDEDVN STPPKAAEPS TSQGAPGLFC W ENSP00000406027/1-607 ---ATTEMEP GWDDLVRERN ESNP------ ---------- - bmy_15541T0/1-599 ---ATTEIEP LWDDLVRGRN ESNP------ ---------- - ENSBTAP00000030822/1-608 ---ATTEIEP RWDDLVRGRN ESHP------ ---------- -