KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:41:04 2014 Check: 00 .. Name: ENSP00000338807/1-765 Len: 771 Check: 8191 Weight: 1.00 Name: ENSBTAP00000030910/1-766 Len: 771 Check: 7065 Weight: 1.00 Name: ENSTTRP00000012159/1-758 Len: 771 Check: 3809 Weight: 1.00 Name: bmy_20493T0/1-724 Len: 771 Check: 5698 Weight: 1.00 Name: BACU014360/1-761 Len: 771 Check: 8348 Weight: 1.00 // 1 50 ENSP00000338807/1-765 MDPVATHSCH LLQQLHEQRI QGLLCDCMLV VKGVCFKAHK NVLAAFSQYF ENSBTAP00000030910/1-766 MDPVAAHSCH LLQQLHEQRI QGLLCDCMLV VKGVCFKAHK NVLAAFSQYF ENSTTRP00000012159/1-758 MDPVATHSCH LLQQLHEQRI QGLLCDCMLV VKGVCFKAHK NVLAAFSQYF bmy_20493T0/1-724 MEPPPRS--- -----HPRAP RG-------- ---------- ---------- BACU014360/1-761 MDPVATHSCH LLQQLHEQRI QGLLCDCMLV VKGVCFKAHK NVLAAFSQYF 51 100 ENSP00000338807/1-765 -RSLFQNSSS QKNDVFHLDV KNVSGIGQIL DFMYTSHLDL NQDNIQVMLD ENSBTAP00000030910/1-766 SRSLFQNSSG QKNDVFHLDI KNVSGIGQIL DFMYTSHLDL NQDNIQVMLD ENSTTRP00000012159/1-758 -RSLFQNSSG QKNDVFHLDI KNVSGIGQIL DFMYTSHLDL NQDNIQVMLD bmy_20493T0/1-724 --SLFQNSSG QKNDVFHLDI KNVSGIGQIL DFMYTSHLDL NQDNIQVMLD BACU014360/1-761 -RSLFQNSSG QKNDVFHLDI KNVSGIGQIL DFMYTSHLDL NQDNIQVMLD 101 150 ENSP00000338807/1-765 TAQCLQVQNV LSLCHTFLKS ATVVQPPGMP CNSTLSLQST LTPDATCVIS ENSBTAP00000030910/1-766 TAQCLQVQNV LSLCHTFLKS ATIDQPPGLP CHGTFSLQST LTPDTNCVLS ENSTTRP00000012159/1-758 TAQCLQVQNV LNLCHTFLKS AGVDQPPGLP CHSTFSLQSA LTPDANCVIS bmy_20493T0/1-724 TAQCLQVQNV LNLCHTFLKS AGVDQPPGLS CHSTFSLQSA LTPDANCVIS BACU014360/1-761 TAQCLQVQNV LNLCHTFLKS AGVDQPPGLS CHSTFSLQSA LTPDANCVIS 151 200 ENSP00000338807/1-765 ENYPPHLLQE CSADAQQNKT LDESHPHASP SVNRHHSAGE ISKQAPDTSD ENSBTAP00000030910/1-766 ENYPPHLLPE CSAGAQQCRA VDGSLSHAPP SVGLHPPTAE TSKQAPDPFD ENSTTRP00000012159/1-758 ENYAPHLLQE CSAGVQQGRV VDESHSHAPP SVGLHTSTAE TSKQAPDTLD bmy_20493T0/1-724 ENYAPHLLQE CSAGVQQSRV VDESHSHAPP SVGLHTSTAE TSKQAPDTLD BACU014360/1-761 ENYAPHLLQE CSAGVQQSRV VDESHSHAPT SVGLHTSTAE TSKQAPDTLD 201 250 ENSP00000338807/1-765 GSCTELPFKQ PNYYYKLRNF YSKQYHKHAA GPSQERVVEQ PFAFSTSTDL ENSBTAP00000030910/1-766 GSCTELPFKQ PNCYYKLRNL YSKQYYKHAS CPSHERVTEQ PFTFSASADL ENSTTRP00000012159/1-758 GSCTELPFKQ PNYYYKLRNL YSKQYYKQAT CPSHERIIKQ PFTFSTSSDL bmy_20493T0/1-724 GSCTELPFKQ PNYYYKLRNL YSKQYYKQAT CPSHERIIEQ PFTFSTSSDL BACU014360/1-761 GSCTELPFKQ PNYYYKLRNL YSKQYYKQAT CPSHERIIEQ PFTFSTSSDL 251 300 ENSP00000338807/1-765 TTVESQPCAV SHSECILESP EHLPSNFLAQ PVNDSAPHPE SDATCQQPVK ENSBTAP00000030910/1-766 HAEDRRPYAV GHTECVLESS QHLPSNFLAQ PLGENAPDPA SDHAGQQPTR ENSTTRP00000012159/1-758 HAAEHQPCAV GHAECVLESS EHLPSNFLAQ PLSEPTPDPE PDHTSQQPTR bmy_20493T0/1-724 HAAEHQPCAV GPAECVLESS EHLPSNFLAQ PLSEPTPDPE PDNASQQPTR BACU014360/1-761 HAAEHQPCAV GPAECVLESS EHLPSNFLAQ PLSEPTPDPE PDNASQQPTR 301 350 ENSP00000338807/1-765 QMRLKKAIHL KKLNFLKSQK YAEQVSEPKS DDGLTKRLES ASKNTLEKAS ENSBTAP00000030910/1-766 QMRLKKAIHL KKLNFLKSQK SAEQTSEPKP DDSLTMRLEA AREHGVEKVN ENSTTRP00000012159/1-758 QMRLKKAIHL KKLNFLKSQK SAEQTSEPKS DDRLTKRIES ASDHSVEKVN bmy_20493T0/1-724 QMRLKKAIHL KKLNFLKSQK SAEQTSEPKS DDRLTKRIES ASERSIEKVN BACU014360/1-761 QMRLKKAIHL KKLNFLKSQK SAEQTSEPKS DDRLTKRIES ASEHSIEKVN 351 400 ENSP00000338807/1-765 SQSAEEKESE EVVSCENFNC ISETERPEDP AALEDQSQTL QSQRQYACEL ENSBTAP00000030910/1-766 SPSAEEKESE ELSNSENFNG VSETERPEDP AALEDQTQLP QSQRQYACEL ENSTTRP00000012159/1-758 SQSAEEKESE ELISSENFNC MNEMERPEDT AALEDQSQTL QSQRQYACEL bmy_20493T0/1-724 SQSAEEKESE ELISSENFNC MNEMERSEDT AALEDQSQTL QSQRQYACEL BACU014360/1-761 SQSAEEKESE ELISSENFNC MNEMERSEDT AALEDQSQTL QSQRQYACEL 401 450 ENSP00000338807/1-765 CGKPFKHPSN LELHKRSHTG EKPFECNICG KHFSQAGNLQ THLRRHSGEK ENSBTAP00000030910/1-766 CGKPFKHPSN LELHRRSHTG EKPFECNICG KHFSQAGNLQ THLRRHSGEK ENSTTRP00000012159/1-758 CGKPFKHPSN LELHKRSHTG EKPFECNICG KHFSQAGNLQ THLRRHSGEK bmy_20493T0/1-724 CGKPFKHPSN LELHKRSHTG EKPFECNICG KHFSQAGNLQ THLRRHSGEK BACU014360/1-761 CGKPFKHPSN LELHKRSHTG EKPFECNICG KHFSQAGNLQ THLRRHSGEK 451 500 ENSP00000338807/1-765 PYICEICGKR FAASGDVQRH IIIHSGEKPH LCDICGRGFS NFSNLKEHKK ENSBTAP00000030910/1-766 PYICEICGKR FAASGDVQRH IIIHSGEKPH LCDICGRGFS NFSNLKEHKK ENSTTRP00000012159/1-758 PYICEICGKR FAASGDVQRH IIIHSGEKPH LCDICGRGFS NFSNLKEHKK bmy_20493T0/1-724 PYICEICGKR FAASGDVQRH IIIHSGEKPH LCDICGRGFS NFSNLKEHKK BACU014360/1-761 PYICEICGKR FAASGDVQRH IIIHSGEKPH LCDICGRGFS NFSNLKEHKK 501 550 ENSP00000338807/1-765 THTADKVFTC DECGKSFNMQ RKLVKHRIRH TGERPYSCSA CGKCFGGSGD ENSBTAP00000030910/1-766 THTADKVFTC DECGKSFNMQ RKLVKHRIRH TGERPYSCSA CGKCFGGSGD ENSTTRP00000012159/1-758 THTADKVFTC DECGKSFNMQ RKLVKHRVRH TGERPYSCSA CGKCFGGSGD bmy_20493T0/1-724 THTADKVFTC DECGKSFNMQ RKLVKHRVRH TGERPYSCSA CGKCFGGSGD BACU014360/1-761 THTADKVFTC DECGKSFNMQ RKLVKHRVRH TGERPYSCSA CGKCFGGSGD 551 600 ENSP00000338807/1-765 LRRHVRTHTG EKPYTCEICN KCFTRSAVLR RHKKMHCKAG DESPDVLEEL ENSBTAP00000030910/1-766 LRRHVRTHTG EKPYTCDVCN KCFTRSAVLR RHKKTHCRAS DEGPGALEAL ENSTTRP00000012159/1-758 L-RHVRTHTG EKPYTCDICN KCFTRSAVLR RHKKMLCRAD DHG-DALEEL bmy_20493T0/1-724 LRRHVRTHTG EKPYTCDICS KCFTRSAVLR RHKKMHCRAD DQGQDALEEL BACU014360/1-761 LRRHVRTHTG EKPYTCDICS KCFTRSAVLR RHKKMHCRAD DRGQDALEEL 601 650 ENSP00000338807/1-765 SQAIETSDLE KSQSSDSFSQ DTSVTLMP-V SVKLPVHPVE -NSVAEFDSH ENSBTAP00000030910/1-766 ARAIEAPDLE RSQSSDSFSQ DVSVPLMPAV TVKIPTHPVD EDSVAGFDSP ENSTTRP00000012159/1-758 TQAIETSDLE KSPSSDSFSQ DVSLTLMP-V SVNIPVHPVE KHSLAEFDGH bmy_20493T0/1-724 TQAIETSDLE KSQSSDSFSQ DVSLTLMP-V SVKIPVHPVE EDSVAEFDGH BACU014360/1-761 TQAIETSDLE KSQSSDSFSQ DVSLTLMP-V SVKIPVHPVE EDSVAEFDGH 651 700 ENSP00000338807/1-765 SGGSYCKLRS MIQP-HGVSD QEKLSLDPGK LAK-PQMQQT QPQAYAYSDV ENSBTAP00000030910/1-766 -----CKFQP VAQPQHGPSE SEKLSLEPVK LAKPPHVPPA QHQAYGYPDV ENSTTRP00000012159/1-758 -----CQFPS LVHP-HGARE -DNLSLGPLK LAK-PHVPEA QHQVYIYSGV bmy_20493T0/1-724 -----CKFRS LVQS-HGASE QEKLSLGPLK LAK-PHVPQA QHQAYSYSDV BACU014360/1-761 -----CKFRS LVQS-HGASE QEKLSLGPLK LAK-PHVPQA QHQAYSYSDV 701 750 ENSP00000338807/1-765 DTPAGGEPLQ ADGMAMIRSS LAALDN-HGG DPLGSRASST TYRNSEGQFF ENSBTAP00000030910/1-766 DAPAGAEPLQ ADGVAALRSS LAALDHPPCT DPLGSRAAAP AYRNSEGQFF ENSTTRP00000012159/1-758 EASAGTEPLQ ADGMAATCSS LAALHN-HCA DTLGSRASAP AYRNSEGHFF bmy_20493T0/1-724 EASAGTEPLQ ADGMAAIRSS LAALDH-HCA DPLGSRASAP AYRNSEGQFF BACU014360/1-761 EAQAGTEPLQ ADGMAAIRSS LAALDH-HCA DPLGSRASAP AYRNSEGQFF 751 800 ENSP00000338807/1-765 SSMTLWGLAM KTLQNENELD Q ENSBTAP00000030910/1-766 SSMTLWGLAM KTLQNESELD Q ENSTTRP00000012159/1-758 SSMTLWGLAM KTLQNESELD Q bmy_20493T0/1-724 SSMTLWGLAM KTLQNESELD Q BACU014360/1-761 SSMTLWGLAM KTLQNESELD Q