KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:41:12 2014 Check: 00 .. Name: bmy_03986T0/1-347 Len: 496 Check: 5097 Weight: 1.00 Name: ENSP00000345974/1-450 Len: 496 Check: 8682 Weight: 1.00 Name: ENSTTRP00000015805/1-413 Len: 496 Check: 5957 Weight: 1.00 Name: BACU014679/1-462 Len: 496 Check: 5686 Weight: 1.00 Name: ENSBTAP00000031013/1-443 Len: 496 Check: 6852 Weight: 1.00 // 1 50 bmy_03986T0/1-347 ---------- ---------- ---------- ---------- ---------- ENSP00000345974/1-450 MVSADAMVSA DAMVSADAMV SADAMVSADA MVSADAMVSA DAMVSADAMH ENSTTRP00000015805/1-413 ---------- ---------- ---------- ---SDAMVSA ----ATAGAH BACU014679/1-462 ---------- -------MVR GRISRLSVRD VRFPTSLGGH ----GSDAMH ENSBTAP00000031013/1-443 ---------- -------MVH GRVSRLSVHD VRFPTSLGGH ----GSDAMH 51 100 bmy_03986T0/1-347 ---------- MLHSPTRN-- ---------- ------VVTI NEMVPIEMRK ENSP00000345974/1-450 TDPDYSAAYV VIETDAEDGI KGCGITFTLG KGTEVVVCAV NALAHHVLNK ENSTTRP00000015805/1-413 TDPDYSAAYV VLETDAEDGL KGYGITFTLG KGTEVXXXXX XXXXXXXXXX BACU014679/1-462 TDPDYSAAYV VLETDAEDGL KGYGITFTLG KGTEVVVCAV NALAPHLLNK ENSBTAP00000031013/1-443 TDPDYSAAYV VLETDAEDGL KGYGITFTLG RGTEVVVCAV NALAPHVLNK 101 150 bmy_03986T0/1-347 ESHRAV---- ---------- MLCWLS---- ---------- ---------- ENSP00000345974/1-450 DLKDIVGDFR GFYRQLTSDG QLRWIGPEKG VVHLATAAVL NAVWDLWAKQ ENSTTRP00000015805/1-413 XXXXXXXXXX XXXXXXXXXX XXXXIGPEKG VVHLATSAVL NAVWDLWAKQ BACU014679/1-462 DLGDIVGDFR GFYRQLTSDG QLRWIGPEKG VVHLATAAVL NAVWDLWAKQ ENSBTAP00000031013/1-443 DLGEIVGDFR GFYRQLTSDG QLRWIGPEKG VVHLATAAVL NAVWDLWAKQ 151 200 bmy_03986T0/1-347 ---------- -------CFC SEFQHMVVLL VHGTAVAFVK PHQ------- ENSP00000345974/1-450 EGKPVWKLLV DMDPRMLVSC IDFRYITDVL TEEDALEILQ KGQIGKKERE ENSTTRP00000015805/1-413 EGKPLWKLLV DMDPRKLVSC LDFRYITDVL TEEEAYEILQ KGQVGKKERE BACU014679/1-462 EGK------- --DPRKLVSC LDFRYITDVL TEEEAYEILQ KGQVGKKERE ENSBTAP00000031013/1-443 EGKPLWKLLV DMDPRTLVSC IDFRYITDVL TEEEACEILR QSQVGKKERE 201 250 bmy_03986T0/1-347 ------RWPR C---CLDLGE CVVTALLLSP QLCSKALEDG WTRFKVKVGA ENSP00000345974/1-450 KQMLAQGYPA YTTSCAWLGY SDDTL----K QLCAQALKDG WTRFKVKVGA ENSTTRP00000015805/1-413 EQMLAHGYPA YTTSCAWLGY SDTTL----K QLCSKALEDG WTRFKVKVGA BACU014679/1-462 EQMLAHGYPA YTTSCAWLGY SDATL----K QLCSKALEDG WTRFKVKVGA ENSBTAP00000031013/1-443 EQMLAHGYPA YTTSCAWLGY PDATL----K QLCSEALKDG WTRFKVKVGA 251 300 bmy_03986T0/1-347 DLQDDIRRCR LIRNMIGPEK TLMMDANQRW DVPEAVEWTA KLAEFKPLWI ENSP00000345974/1-450 DLQDDMRRCQ IIRDMIGPEK TLMMDANQRW DVPEAVEWMS KLAKFKPLWI ENSTTRP00000015805/1-413 DLQDDIRRCR LIRNMIGPEK TLMMDANQRW DVPEAVEWMA KLAEFKPLWI BACU014679/1-462 DLQDDIRRCR LIRNMIGPEK TLMMDANQRW DVPEAVEWMA KLAEFKPLWI ENSBTAP00000031013/1-443 DLQDDIRRCR LVRNMIGPEK TLMMDANQRW DVPEAVEWMT KLAEFKPLWI 301 350 bmy_03986T0/1-347 EEPTSPDDIL GHATISKALV PLGIGVATGE QCHNRVIFKQ LLQAKALQFL ENSP00000345974/1-450 EEPTSPDDIL GHATISK--- ---------- -CHNRVIFKQ LLQAKALQFL ENSTTRP00000015805/1-413 EEPTSPDDIL GHATISK--- ---------- -CHNRVIFKQ LLQAKALQFL BACU014679/1-462 EEPTSPDDIL GHATISKALV PLGIGVATGE QCHNRVIFKQ LLQAKALQFL ENSBTAP00000031013/1-443 EEPTSPDDIL GHAAISKALA PLGIGVATGE QCHNRVIFKQ LLQAKALKFL 351 400 bmy_03986T0/1-347 QIDSCRLGSV NENLSVLLMA KKFDSNKQSR RFSFTSPSLP YLALSGNLSS ENSP00000345974/1-450 QIDSCRLGSV NENLSVLLMA KKFE------ ---------- ---------- ENSTTRP00000015805/1-413 QIDSCRLGSV NENLSVLLMA KKFD------ ---------- ---------- BACU014679/1-462 QIDSCRLGSV NENLSVLLMA KKFDSNKQSR RFSFTSPSLP YLALSGNLSS ENSBTAP00000031013/1-443 QIDSCRLGSV NENLSVLLMA KKFE------ ---------- ---------- 401 450 bmy_03986T0/1-347 LLVPVCPHAG GVGLCELVQH LIIFDFISVS ASLKDRMCEY VDHLHEHFKY ENSP00000345974/1-450 --IPVCPHAG GVGLCELVQH LIIFDYISVS ASLENRVCEY VDHLHEHFKY ENSTTRP00000015805/1-413 --IPVCPHAG GVGLCELVQH LIIFDFISVS ASLKDRMCEY VDHLHEHFKY BACU014679/1-462 LSVPVCPHAG GVGLCELVQH LIIFDFVSVS ASLKDRMCEY VDHLHEHFKY ENSBTAP00000031013/1-443 --IPVCPHAG GVGLCELVQH LIIFDFISVS ASLQDRMCEY VDHLHEHFKY 451 500 bmy_03986T0/1-347 PVIIKKASYM PPKDAGYSTE MKXESVKKHQ YPDGEVWEKL LAAQGN ENSP00000345974/1-450 PVMIQRASYM PPKDPGYSTE MKEESVKKHQ YPDGEVWKKL LPAQEN ENSTTRP00000015805/1-413 PVIIKKASYM PPKDAGYSTE MKEESVKKHQ YPDGEVWEKL LAAQGN BACU014679/1-462 PVIIKKASYM PPKDAGYSTE MKEESVKKHQ YPDGEVWEKL LAAQVN ENSBTAP00000031013/1-443 PVLIREAAYM PPKDAGYSTE MKEDSVKRHR YPDGEVWKKL LSAQGN