KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:41:16 2014 Check: 00 .. Name: BACU004750/1-383 Len: 440 Check: 4887 Weight: 1.00 Name: ENSP00000357682/1-345 Len: 440 Check: 1348 Weight: 1.00 Name: ENSBTAP00000031105/1-345 Len: 440 Check: 8979 Weight: 1.00 Name: bmy_19441T0/1-346 Len: 440 Check: 230 Weight: 1.00 Name: ENSTTRP00000011290/1-344 Len: 440 Check: 9338 Weight: 1.00 // 1 50 BACU004750/1-383 MMSIEITPSS KPHPPVVGKV THHSIELYWD LEKKVKRQGP QEQWFRFSIE ENSP00000357682/1-345 MEPQKIMPPS KPHPPVVGKV THHSIELYWD LEKKAKRQGP QEQWFRFSIE ENSBTAP00000031105/1-345 MELQKIASSS KPHPPVVGKV THHSIELYWD LEKKAKRQGP QEQWFRFSIE bmy_19441T0/1-346 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011290/1-344 --QQKITPFS KPHPPVVGKV THHSIELYWD LEKKVKRQGP QEQWFRFSIE 51 100 BACU004750/1-383 EEDPKMHTYG IIYTGYATKH VVEGLDPRTL YRFRLKVTSP SGEHEYSPVV ENSP00000357682/1-345 EEDPKMHTYG IIYTGYATKH VVEGLEPRTL YRFRLKVTSP SGECEYSPLV ENSBTAP00000031105/1-345 EEDPKLHTYG IIYTGYATKH VVEGLEPRTL YRFRLKVTSP SGEYAYSPVV bmy_19441T0/1-346 -----MHTYG IIYTGYATKH VVEGLDPRTL YRFRLKVTSP SGEHEYSPVV ENSTTRP00000011290/1-344 EEDPRMHTYG IIYTGYATKH VVEGLDPRTL YRFRLKVTSP SGEHEYSPVV 101 150 BACU004750/1-383 SVSTTSEYAE LETHLSKGDK QCEGEGEPIS SEHLHRAVNV NDEDLLLRIL ENSP00000357682/1-345 SVSTTR---- ---------- ------EPIS SEHLHRAVSV NDEDLLVRIL ENSBTAP00000031105/1-345 SVSTTR---- ---------- ------EPIS SEHLHRAVNV NDEDLLVRIL bmy_19441T0/1-346 SVSTTR---- ---------- ------EPIS SEHLHRAVNV NDEDLLLRIL ENSTTRP00000011290/1-344 SVSTTT---- ---------- -----GEPIS SEHLHRAVNV NDEDLLLRIL 151 200 BACU004750/1-383 QGG------- ---------- ---------- ---------- ---------- ENSP00000357682/1-345 QGG------- ---------- ---------- ---------- ---------- ENSBTAP00000031105/1-345 QGG------- ---------- ---------- ---------- ---------- bmy_19441T0/1-346 QGGQGSLRQQ KLNGAEGTGI FRKMNHFNHL CPEREVSCES TGSRVGTFIS ENSTTRP00000011290/1-344 QAG------- ---------- ---------- ---------- ---------- 201 250 BACU004750/1-383 ---------N VKVDVPNTFG FTALMVAAQR GYSRLVKILV SNGTDVNLQN ENSP00000357682/1-345 ---------R VKVDVPNKFG FTALMVAAQK GYTRLVKILV SNGTDVNLKN ENSBTAP00000031105/1-345 ---------N VKVDVPNKFG FTALMVAAQR GYTRLVKILI SHGTDVNLQN bmy_19441T0/1-346 FFPSVFPPSN VKVDVPNKFG FTALMVAAQR GYSRLVKILV SNGTDVNLQN ENSTTRP00000011290/1-344 ---------N VKVDVPNKFG FTALMVAAQR GYTRLVKILV SNGTDVNLQN 251 300 BACU004750/1-383 GSGKNSLMLA CYAGHLDVVK YLRRHGASWD TRDLGGCTAL HWAADGGHCN ENSP00000357682/1-345 GSGKDSLMLA CYAGHLDVVK YLRRHGASWQ ARDLGGCTAL HWAADGGHCS ENSBTAP00000031105/1-345 GSGKDSLMLA CYAGHLDVVK YLRRHGASWD TRDLGGCTAL HWAADGGHCN bmy_19441T0/1-346 GSGKDSLMLA CYAGHLDVVK YLRRHGASWD TRDLGGCTAL HWAADGGHCN ENSTTRP00000011290/1-344 GSGKDSLMLA CYAGHLDVVK YLRRHGASWD ARDLGGCTAL HWAADGGHCN 301 350 BACU004750/1-383 VIEWMIKDGC EVDTMDAGSG WTPLMRVSAV SGNQKVASLL IDAGADVNMK ENSP00000357682/1-345 VIEWMIKDGC EVDVVDTGSG WTPLMRVSAV SGNQRVASLL IDAGANVNVK ENSBTAP00000031105/1-345 VIEWMIGDGC EVDAVDAGSR WTPLMRVSAV SGNQEVASLL IDAGADVNVK bmy_19441T0/1-346 VIEWMIKDGC EVDTTDAGSG WTPLMRVSVV SGNQKVASLL IDAGADVNMK ENSTTRP00000011290/1-344 VIEWMIKDGC EVDPTDAGSG WTPLMRVSAV SGNQEVASLL IDAGADVNMK 351 400 BACU004750/1-383 DKDGKTPLMV AVLNNHEELV QLLLDKGADA SVKNEIEVFS IPPGGGTL-L ENSP00000357682/1-345 DRNGKTPLMV AVLNNHEELV QLLLDKGADA SVKNEF---- ---GKGVLEM ENSBTAP00000031105/1-345 DKDGKTPLMV AVLNNHEELV QLLLDRGADA SVKNEF---- ---GKGVLEM bmy_19441T0/1-346 DKDGKTPLMV AVLNNHEELV QLLLDKGADA SVKNEF---- ---GKGVLEM ENSTTRP00000011290/1-344 DKDGKTPLMV AVLNNHEELV QLLLDKGADA SVKNEF---- ---GKGVLEM 401 450 BACU004750/1-383 ESGLAREPVR LLQAAVLARA GLWVYDGWTC GATTTLADLK ENSP00000357682/1-345 ARVFDRQSVV SLLEERKKK- ---------- -QRPKKSCVC ENSBTAP00000031105/1-345 ARVFDRQNVL SLLEERKRK- ---------- -QMLKKSSVR bmy_19441T0/1-346 ARVFDRKNVV SLLEEVKKK- ---------- -QMPKKSSVR ENSTTRP00000011290/1-344 ARVFDRKNVV SLLEEMRKK- ---------- -QMPKKSSIR