KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:41:17 2014 Check: 00 .. Name: bmy_22470T0/1-848 Len: 892 Check: 7738 Weight: 1.00 Name: BACU007389/1-305 Len: 892 Check: 5119 Weight: 1.00 Name: ENSBTAP00000031108/1-431 Len: 892 Check: 2630 Weight: 1.00 Name: ENSP00000255499/1-428 Len: 892 Check: 1088 Weight: 1.00 Name: ENSTTRP00000007129/1-431 Len: 892 Check: 1918 Weight: 1.00 // 1 50 bmy_22470T0/1-848 LNKQQLQLLK ERFQAFLNGE TQIVADEAFC NAVRSYYEYL TKSISSKYVH BACU007389/1-305 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000031108/1-431 ---------- ---------- ---------- ---------- ---------- ENSP00000255499/1-428 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007129/1-431 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_22470T0/1-848 YFKKRLQLIL WMVIRASGLY HTFPSSPHSS YDPFWISSSL SRLTFISYKI BACU007389/1-305 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000031108/1-431 ---------- ---------- ---------- ---------- ---------- ENSP00000255499/1-428 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007129/1-431 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_22470T0/1-848 MCTSDSVAWT EGVKLVITSG YEGSFKSTVK DGIRHDTCYK TRTHIQNTFL BACU007389/1-305 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000031108/1-431 ---------- ---------- ---------- ---------- ---------- ENSP00000255499/1-428 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007129/1-431 ---------- ---------- ---------- ---------- ---------- 151 200 bmy_22470T0/1-848 GVKWKKKPYT VVFSRIKCKS SVFCGFLEIS NNIIALDTVT CEANGGMSLL BACU007389/1-305 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000031108/1-431 ---MGQLPGA GVFCRGG--- ---CGF---- ---------- ---------- ENSP00000255499/1-428 ---MGPPPGA GVSCRGG--- ---CGF---- ---------- ---------- ENSTTRP00000007129/1-431 ---MGPPPGA GVSCRGG--- ---CGF---- ---------- ---------- 201 250 bmy_22470T0/1-848 RITPSIHSSV SSRLLRLSIF LLLS--LPDS KG-KAIWTAH LNITFQVG-- BACU007389/1-305 ---------- -------MLL MIFKGEVQG- ---------- ----FPV--- ENSBTAP00000031108/1-431 ---------- -SRLLAWCFL LVLSPQTPGS RGAEAVWTAY LNVSWRVPHT ENSP00000255499/1-428 ---------- -SRLLAWCFL LALSPQAPGS RGAEAVWTAY LNVSWRVPHT ENSTTRP00000007129/1-431 ---------- -SRLLAWCFL LALSPQAPGS RGAEAVWTAY LNVSWRVPHT 251 300 bmy_22470T0/1-848 --NQIISELG ESGVFGNHSP LERVSGVVVL PEGWNQ-NAC NPMTNFSRPE BACU007389/1-305 -------ELS D--------- ---------- ---------C -----YNDPI ENSBTAP00000031108/1-431 GVNRTVWELS EEGVYGQDSP LEPVAGVLVP PDGPGALNAC NPHTNFTVPT ENSP00000255499/1-428 GVNRTVWELS EEGVYGQDSP LEPVAGVLVP PDGPGALNAC NPHTNFTVPT ENSTTRP00000007129/1-431 GVNRTVWELS EEGVYGQDSP LEPVAGVLVP PDGPGALNAC NPHTNFTVPT 301 350 bmy_22470T0/1-848 RADSWLALIE RGGCTFTHKI NVAAEKGANG VIIYNYPGTG NKVFPMSHQG BACU007389/1-305 K--------- ---------- ---------- ---------- ---------- ENSBTAP00000031108/1-431 VPGDW----- ---------- ---------- ---------- ---------- ENSP00000255499/1-428 V---W----- ---------- ---------- ---------- ---------- ENSTTRP00000007129/1-431 VPGDW----- ---------- ---------- ---------- ---------- 351 400 bmy_22470T0/1-848 TENMVAVMIG NLKGMELLHL IQKGFYVTII IEVGRMHLPW LSHYVMSLFT BACU007389/1-305 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000031108/1-431 ---------- ---------- ---------- ---------- ---------- ENSP00000255499/1-428 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007129/1-431 ---------- ---------- ---------- ---------- ---------- 401 450 bmy_22470T0/1-848 FLAATVAYLF LYCAWRPRVP NSSTRRRRQI KADVKKAIGQ LQLQVLKEGD BACU007389/1-305 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000031108/1-431 ---------- ---------- ---------- ---------- ---------- ENSP00000255499/1-428 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007129/1-431 ---------- ---------- ---------- ---------- ---------- 451 500 bmy_22470T0/1-848 KELDPDENNC VVCFDIYKPQ DVVRILTCKH FFHKACIDPW LLAHRTCPMC BACU007389/1-305 ---------- ---------I NVVKV----- ---------- ---------- ENSBTAP00000031108/1-431 ---------- ---------G SSVQV----- ---------- ---------- ENSP00000255499/1-428 ---------- ---------G STVQV----- ---------- ---------- ENSTTRP00000007129/1-431 ---------- ---------G SSVQV----- ---------- ---------- 501 550 bmy_22470T0/1-848 NFLWLLSQHC CRASAVWTAY MNISFHVGNR MLSELGETGV FGRSSALKRV BACU007389/1-305 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000031108/1-431 ---------- ---------- ---------- ---------- ---------- ENSP00000255499/1-428 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007129/1-431 ---------- ---------- ---------- ---------- ---------- 551 600 bmy_22470T0/1-848 AGVIVPPEGK MQNACNPSTS FSRSKNSETW LALVERGG-C TFTQKIKVAV BACU007389/1-305 ---------- ---------- ---------- --LLDPGI-C ---------- ENSBTAP00000031108/1-431 ---------- ---------- --------SW LALIQRGGGC TFADKIHLAY ENSP00000255499/1-428 ---------- ---------- --------SW LALIQRGGGC TFADKIHLAY ENSTTRP00000007129/1-431 ---------- ---------- --------SW LALIQRGGGC TFADKIHLAY 601 650 bmy_22470T0/1-848 EKGASGVIIY NLPGTGNQVF PMSHQAFEDI VVVMIGNLKG MEILHLIQKG BACU007389/1-305 ---------- ---------- ------AGDI VAIMIGNLKG TKILQSIQRG ENSBTAP00000031108/1-431 ERGASGAVIF NFPGTRNEVI PMSHPGAGDI VAIMIGNLKG TKILQSIQRG ENSP00000255499/1-428 ERGASGAVIF NFPGTRNEVI PMSHPGAVDI VAIMIGNLKG TKILQSIQRG ENSTTRP00000007129/1-431 ERGASGAVIF NFPGTRNEVI PMSHPGAGDI VAIMIGNLKG TKILQSIQRG 651 700 bmy_22470T0/1-848 VHXTVMIEVG RKHIIWMNHY -----FVSFV IVTTATLAYF IFYHIRRLWV BACU007389/1-305 IQVTMVIEVG KKHGPWVNHY SIFFVSVSFF IITAATVGYF IFYSARRLRN ENSBTAP00000031108/1-431 IQVTMVIEVG KKHGPWVNHY SIFFVSVSFF IITAATVGYF IFYSARRLRN ENSP00000255499/1-428 IQVTMVIEVG KKHGPWVNHY SIFFVSVSFF IITAATVGYF IFYSARRLRN ENSTTRP00000007129/1-431 IQVTMVIEVG KKHGPWVNHY SIFFVSVSFF IITAATVGYF IFYSARRLRN 701 750 bmy_22470T0/1-848 ARIQNRRWQR LTTDLQKACG QLQLRVLKEG DTEVCPNGDS CVVCFELYKP BACU007389/1-305 ARAQSRKQRQ LKADAKKAIG RLQLRTLKQG DKEIGPDGDS CAVCIELYKP ENSBTAP00000031108/1-431 ARAQSRKQRQ LKADAKKAIG RLQLRTLKQG DKEIGPDGDS CAVCIELYKP ENSP00000255499/1-428 ARAQSRKQRQ LKADAKKAIG RLQLRTLKQG DKEIGPDGDS CAVCIELYKP ENSTTRP00000007129/1-431 ARAQSRKQRQ LKADAKKAIG RLQLRTLKQG DKEIGPDGDS CAVCIELYKP 751 800 bmy_22470T0/1-848 NDTVRILTCK HFFHQNCIDP WILAHGTCPM CKCDILKALG IQVDVEDGPE BACU007389/1-305 NDLVRILTCK NIFHKTCVDP WLLEHRTCPM CKCDILKALG IEVDVEDGSV ENSBTAP00000031108/1-431 NDLVRILTCN HVFHKTCVDP WLLEHRTCPM CKCDILKALG IEVDVEDGSV ENSP00000255499/1-428 NDLVRILTCN HIFHKTCVDP WLLEHRTCPM CKCDILKALG IEVDVEDGSV ENSTTRP00000007129/1-431 NDLVRILTCN HIFHKTCVDP WLLEHRTCPM CKCDILKALG IEVDVEDGSV 801 850 bmy_22470T0/1-848 SLQVLMLNEL PGTLSPREEG TNNELPPAG- ---RSNKVTH VEEEKHPTSQ BACU007389/1-305 SLQVPASNEA SNSASPHEED NRSETASSGY ASVQGADEPP LEEHVQSANE ENSBTAP00000031108/1-431 SLQVPVSNET SSNASPHEED NRSETASSGY ASVQGADEPP LEEHAHSANE ENSP00000255499/1-428 SLQVPVSNEI SNSASSHEED NRSETASSGY ASVQGTDEPP LEEHVQSTNE ENSTTRP00000007129/1-431 SLQVPASNEA SNSASPHEED NRSETASSGY ASVQGADEPP LEEHVQSANE 851 900 bmy_22470T0/1-848 N----DGPSN SVAADVHPPP ---------- ---------- -- BACU007389/1-305 NLQLVNHEAS SMAVDVVPHV DNPTFEEDET PDRETAVREI KS ENSBTAP00000031108/1-431 NLQLVNHEAN SMAVDVVPHV DNPTFEEDES PDQETTVREI KS ENSP00000255499/1-428 SLQLVNHEAN SVAVDVIPHV DNPTFEEDET PNQETAVREI KS ENSTTRP00000007129/1-431 NLQLVNHEAS SMAVDVVPHV DNPTFEEDET PDRETAVREI KS