KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:41:17 2014 Check: 00 .. Name: ENSTTRP00000001486/1-192 Len: 240 Check: 6438 Weight: 1.00 Name: bmy_02239T0/1-196 Len: 240 Check: 9473 Weight: 1.00 Name: ENSP00000304283/1-192 Len: 240 Check: 8517 Weight: 1.00 Name: BACU018438/1-179 Len: 240 Check: 2704 Weight: 1.00 Name: ENSBTAP00000031119/1-180 Len: 240 Check: 3404 Weight: 1.00 // 1 50 ENSTTRP00000001486/1-192 MQAIKCVVVG DGAVGKTCLL ISYTTNAFPG EYIPTVFDNY SANVMVDGKP bmy_02239T0/1-196 ---------- ---------- ---------- ---------- ----MVDGKP ENSP00000304283/1-192 MQAIKCVVVG DGAVGKTCLL ISYTTNAFPG EYIPTVFDNY SANVMVDGKP BACU018438/1-179 ---------- --AVGKTCLL ISYTTNAFPG EYIPTVFDNY SANVMVDGKP ENSBTAP00000031119/1-180 ---------- --AVGKTCLL ISYTTNAFPG EYIPTVFDNY SANVMVDGKP 51 100 ENSTTRP00000001486/1-192 VNLGLWDTAG QEDYDRLRPL SYPQTDVFLI CFSLVSPASF ENVRAK---- bmy_02239T0/1-196 VNLGLWDTAG QEDYDRLRPL SYPQTDVFLI CFSLVSPASF ENVRAKTQWS ENSP00000304283/1-192 VNLGLWDTAG QEDYDRLRPL SYPQTDVFLI CFSLVSPASF ENVRAK---- BACU018438/1-179 VNLGLWDTAG QEDYDRLRPL SYPQTDVFLI CFSLVSPASF ENVRAK---- ENSBTAP00000031119/1-180 VNLGLWDTAG QEDYDRLRPL SYPQTDVFLI CFSLVSPASF ENVRAK---- 101 150 ENSTTRP00000001486/1-192 ---------- ---------- ---------- ---------- ----XXXXXX bmy_02239T0/1-196 PHETRRAKCG SRHKEGALGS HGLLWARLRV KLPRGTDQSL PSPQWYPEVR ENSP00000304283/1-192 ---------- ---------- ---------- ---------- ----WYPEVR BACU018438/1-179 ---------- ---------- ---------- ---------- ----WYPEVR ENSBTAP00000031119/1-180 ---------- ---------- ---------- ---------- ----WYPEVR 151 200 ENSTTRP00000001486/1-192 XXXXXXXXXX VGTKLDLRDD KDTIERLRDK KLAPITYPQG LAMAREIGSV bmy_02239T0/1-196 HHCPHTPILL VGTKLDLRDD KDTIERLRDK KLAPITYPQG LAMAREIGSV ENSP00000304283/1-192 HHCPHTPILL VGTKLDLRDD KDTIERLRDK KLAPITYPQG LAMAREIGSV BACU018438/1-179 HHCPHTPILL VGTKLDLRDD KDTIERLRDK KLAPITYPQG LAMAREIGSV ENSBTAP00000031119/1-180 HHCPHTPILL VGTKLDLRDD KDTIERLRDK KLAPITYPQG LAMAREIGSV 201 250 ENSTTRP00000001486/1-192 KYLECSALTQ RGLKTVFDEA IRAVLCPPPV KKPGKKCTVF bmy_02239T0/1-196 KYLECSALTQ RGLKTVFDEA IRAVLCPPPV KKPGKKCTVF ENSP00000304283/1-192 KYLECSALTQ RGLKTVFDEA IRAVLCPPPV KKPGKKCTVF BACU018438/1-179 KYLECSALTQ RGLKTVFDEA IRAVLCPPPV KKPGKKCTV- ENSBTAP00000031119/1-180 KYLECSALTQ RGLKTVFDEA IRAVLCPPPV KKPGKKCTVF