KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:41:19 2014 Check: 00 .. Name: ENSP00000362387/1-294 Len: 294 Check: 3906 Weight: 1.00 Name: ENSBTAP00000031290/1-294 Len: 294 Check: 4302 Weight: 1.00 Name: BACU001942/1-271 Len: 294 Check: 5088 Weight: 1.00 Name: bmy_04422T0/1-264 Len: 294 Check: 9539 Weight: 1.00 Name: ENSTTRP00000007775/1-294 Len: 294 Check: 6552 Weight: 1.00 // 1 50 ENSP00000362387/1-294 MPRGDSEQVR YCARFSYLWL KFSLIIYSTV FWLIGALVLS VGIYAEVERQ ENSBTAP00000031290/1-294 MPRGDSEQVR YCARFSYLWL KFSLVIYSTV FWLIGGLVLS VGIYAEVERQ BACU001942/1-271 MP-------- ---------- -----LSKML FQLIGGLVLS VGVYAEVERQ bmy_04422T0/1-264 MPRGDSEQVR YCARLSYLWL KFSLVIYSTV FWLVGGLVLS VGVYAEVERQ ENSTTRP00000007775/1-294 MPRGDSEQVR YCARLSYLWL KFSLVIYSTV FWLIGGLVLS VGIYAEVERQ 51 100 ENSP00000362387/1-294 KYKTLESAFL APAIILILLG VVMFMVSFIG VLASLRDNLY LLQAFMYILG ENSBTAP00000031290/1-294 KYKTLESAFL APAIILILLG VVMFIVSFIG VLASLRDNLC LLQAFMYILG BACU001942/1-271 KYKTLESAFL APAIILILLG VVMFIVSFIG VLASLRDNLC LLQAFMYILG bmy_04422T0/1-264 KYKTLESAFL APAIILILLG VVMFIVSFIG VLASLRDNLC LLQA------ ENSTTRP00000007775/1-294 KYKTLESAFL APAIILILLG VVMFIVSFIG VLASLRDNLC LLQAFMYILG 101 150 ENSP00000362387/1-294 ICLIMELIGG VVALTFRNQT IDFLNDNIRR GIENYYDDLD FKNIMDFVQK ENSBTAP00000031290/1-294 ICLIIELIGG VVALIFRNQT IDFLNDNIRR GIENYYDDLD FKNIMDFVQK BACU001942/1-271 ICLIIELIGG VVALIFRNQT IDFLNDNIRR GIENYYDDLD FKNIMDFVQK bmy_04422T0/1-264 ---------- ---------T IDFLNDNIRR GIENYYDDLD FKNIMDFVQK ENSTTRP00000007775/1-294 ICLIIELVGG VVALIFRNQT IDFLNDNIRR GIENYYDDLD FKNIMDFVQK 151 200 ENSP00000362387/1-294 KFKCCGGEDY RDWSKNQYHD CSAPGPLACG VPYTCCIRNT TEVVNTMCGY ENSBTAP00000031290/1-294 EFKCCGGEDY RDWSKNQYHD CRAPGPLACG VPYTCCFRNT TEVVNTMCGY BACU001942/1-271 EFKCCGGEDY RDWSKNQYHD CNAPGPLACG VPYTCCFRNT TEVVNTMCGY bmy_04422T0/1-264 EFKCCGGEDY RDWSKNQYHD CNAPGPLACG VPYTCCFRNT TAVVNTMCGY ENSTTRP00000007775/1-294 EFKCCGGEDY RDWSKNQYHD CSAPGPLACG VPYTCCFRNT TEVVNTMCGY 201 250 ENSP00000362387/1-294 KTIDKERFSV QDVIYVRGCT NAVIIWFMDN YTIMAGILLG ILLPQFLGVL ENSBTAP00000031290/1-294 KTIDKERLSV QNVIYVRGCT NAVLMWFTDN YTIMAGVLLG ILLPQFLGVL BACU001942/1-271 RTIDKERLSV QNVIYVRGCT NAVLIWFMDN YTIMAGLLLG ILLPQFLGVL bmy_04422T0/1-264 RTIDKE---- -NVIYVRGCT NAVLIWFMDN YTIMAGLLLG ILLPQFLGVL ENSTTRP00000007775/1-294 RTIDKERLSV QNVIYVRGCT NAVLIWFMDN YTIMAGLLLG ILLPQFLGVL 251 300 ENSP00000362387/1-294 LTLLYITRVE DIIMEHSVTD GLLGPGAKPS VEAAGTGCCL CYPN ENSBTAP00000031290/1-294 LTFLYITRVE DIITEHSVTD GLLGPGTKAG VEAAGTGCCM CYPI BACU001942/1-271 LTFLYITRVE DIIMEHSVTD GLLGPGTKPS VEAAGTGCCM CYPN bmy_04422T0/1-264 LTFLYITRVE DIIMEHSVTD GLLGPGNKPS VEAAGTGCCM CYPN ENSTTRP00000007775/1-294 LTFLYITRVE DIITEHSVTD GLLGPSTKPS VEAAGAGCCM CYPN