KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:41:20 2014 Check: 00 .. Name: ENSTTRP00000016406/1-909 Len: 974 Check: 2264 Weight: 1.00 Name: ENSBTAP00000031316/1-870 Len: 974 Check: 826 Weight: 1.00 Name: ENSP00000362993/1-974 Len: 974 Check: 1815 Weight: 1.00 Name: bmy_07931T0/1-551 Len: 974 Check: 1419 Weight: 1.00 Name: BACU003405/1-872 Len: 974 Check: 4249 Weight: 1.00 // 1 50 ENSTTRP00000016406/1-909 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000031316/1-870 ---------- ---------- ---------- ---------- ---------- ENSP00000362993/1-974 MAAQGEPGYL AAQSDPGSNS ERSTDSPVPG SEDDLVAGAT LHSPEWSEER bmy_07931T0/1-551 ---------- ---------- ---------- ---------- ---------- BACU003405/1-872 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000016406/1-909 ---------- ----AAEGKG KSGEDFFQKI MEETNTQIAW PSKLKIGAKS ENSBTAP00000031316/1-870 ---------- ---------- ---------- ---------- ---------- ENSP00000362993/1-974 FRVDRKKLEA MLQAAAEGKG RSGEDFFQKI MEETNTQIAW PSKLKIGAKS bmy_07931T0/1-551 ---------- ---------- ---------- ---------- ---------- BACU003405/1-872 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000016406/1-909 KKDPHIKVSG KKEDVKEAKE MIMSVLDTKS NRVTLKMDVS HTEHSHVIGK ENSBTAP00000031316/1-870 --DPHIKVSG KKEDVKEAKE MIMSVLDTKS NRVTLKMDVS HTEHSHVIGK ENSP00000362993/1-974 KKDPHIKVSG KKEDVKEAKE MIMSVLDTKS NRVTLKMDVS HTEHSHVIGK bmy_07931T0/1-551 ---------- ---------- MIMSVLDTKS NRVTLKMDVS HTEHSHVIGK BACU003405/1-872 --DPHIKVSG KKEDVKEAKE MIMSVLDTKS NRVTLKMDVS HTEHSHVIGK 151 200 ENSTTRP00000016406/1-909 GGNNIKKVME ETGCHIHFPD SNRNNQAEKS NQXXXXXXXX XXXXXXXXXX ENSBTAP00000031316/1-870 GGNNIKKVME ETGCHIHFPD SNRNNQAEKS NQVSIAGQPA GVESARVRIR ENSP00000362993/1-974 GGNNIKKVME ETGCHIHFPD SNRNNQAEKS NQVSIAGQPA GVESARVRIR bmy_07931T0/1-551 GGNNIKKVME ETGCHIHFPD SNRNNQAEKS NQVSIAGQPA GVESARVRIR BACU003405/1-872 GGNNIKKVME ETGCHIHFPD SNRNNQAEKS NQVSIAGQPA GVESARVRIR 201 250 ENSTTRP00000016406/1-909 ELLPLVLMFE LPIAGILQPV PDPNSPSIQH ISQTYNISVS FKQRSRMYGA ENSBTAP00000031316/1-870 ELLPLVLMFE LPIAGILQPV PDPNSPSIQH ISQMYNISVS FKQRSRMYGA ENSP00000362993/1-974 ELLPLVLMFE LPIAGILQPV PDPNSPSIQH ISQTYNISVS FKQRSRMYGA bmy_07931T0/1-551 ELLPLVLMFE LPIAGILQPV PDPNSPSIQH ISQTYNISVS FKQRSRMYGA BACU003405/1-872 ELLPLVLMFE LPIAGILQPV PDPNSPSIQH ISQTYNISVS FKQRSRMYGA 251 300 ENSTTRP00000016406/1-909 TVIVRGSQNN TSAVKEGTAM LLEHLAGSLA SAIPVSTQLD IAAQHHLFMM ENSBTAP00000031316/1-870 TVIVRGSQNN TSAVKEGTAT LLEHLAGSLA SAIPVSTQLD IAAQHHLFMM ENSP00000362993/1-974 TVIVRGSQNN TSAVKEGTAM LLEHLAGSLA SAIPVSTQLD IAAQHHLFMM bmy_07931T0/1-551 TVIVRGSQNN TSAVKEGTAM LLEHLAGSLA SAIPVSTQLD IAAQHHLFMM BACU003405/1-872 TVIVRGSQNN TSAVKEGTAM LLEHLAGSLA SAIPVSTQLD IAAQHHLFMM 301 350 ENSTTRP00000016406/1-909 GRNGSNIKHI MQRTGAQIHF PDPSNPQKKS TVYLQGTIES VCLARQYLMG ENSBTAP00000031316/1-870 GRNGSNIKHI MQRTGAQIHF PDPSNPQKKS TVYLQGTIES VCLARQYLMG ENSP00000362993/1-974 GRNGSNIKHI MQRTGAQIHF PDPSNPQKKS TVYLQGTIES VCLARQYLMG bmy_07931T0/1-551 GRNGSNIKHI MQRTGAQIHF PDPSNPQKKS TVYLQGTIES VCLARQYLMG BACU003405/1-872 GRNGSNIKHI MQRTGAQIHF PDPSNPQKKS TVYLQGTIES VCLARQYLMG 351 400 ENSTTRP00000016406/1-909 CLPLVLMFDM KEEIEVDPQF IAQLMEQLDV FISIKPKPKQ PSKSVIVKSV ENSBTAP00000031316/1-870 CLPLVLMFDM KEEIEVDPQF IAQLMEQLDV FISIKPKPKQ PSKSVIVKSV ENSP00000362993/1-974 CLPLVLMFDM KEEIEVDPQF IAQLMEQLDV FISIKPKPKQ PSKSVIVKSV bmy_07931T0/1-551 CLPLVLMFDM KEEIEVDPQF IAQLMEQLDV FISIKPKPKQ PSKSVIVKSV BACU003405/1-872 CLPLVLMFDM KEEMEVDPQF IAQLMEQLDV FVSIKPKPKQ PSKSVIVKSV 401 450 ENSTTRP00000016406/1-909 ERNALNMYEA RKCLLGLESS GVTIATSPSP ASCPAGLACP SLDILASAGL ENSBTAP00000031316/1-870 ERNALNMYEA RKCLLGLESS GVSIATSPSP ASCPAGLACP SLDILASAGL ENSP00000362993/1-974 ERNALNMYEA RKCLLGLESS GVTIATSPSP ASCPAGLACP SLDILASAGL bmy_07931T0/1-551 ERNALNMYEA RKCLLGLESS GVTIATSPSP ASCPAGLACP SLDILASAGL BACU003405/1-872 ERNALNMYEA RKCLLGLESS GVTIATSPSP ASCPAGLACP SLDILASAGL 451 500 ENSTTRP00000016406/1-909 GLTGLGLLGP TALSLNTSTT PNSLLNALNS SVSPLQSPSS GTPSPTLWAP ENSBTAP00000031316/1-870 GLTGLGLLGP TTLSLNTSAT PNSLLNALNS SVSPLQSPSS GTPSPTLWAP ENSP00000362993/1-974 GLTGLGLLGP TTLSLNTSTT PNSLLNALNS SVSPLQSPSS GTPSPTLWAP bmy_07931T0/1-551 GLTGLGLLGP TALSLNTSTT PNSLLNALNS SVSPLQSPSS GTPSPTLWAP BACU003405/1-872 GLTGLGLLGP TALSLNTSTT PNSLLNALNS SVSPLQSPSS GTPSPTLWAP 501 550 ENSTTRP00000016406/1-909 PLASTSSATG FSAIPHLMIP STAQATLTNI LLSGVPTYGH TAPSPPPGLT ENSBTAP00000031316/1-870 PLGNTSSATG FSAIPHLMIP STAQATLTNI LLSGVPTYGH TAPSPPPGLT ENSP00000362993/1-974 PLANTSSATG FSAIPHLMIP STAQATLTNI LLSGVPTYGH TAPSPPPGLT bmy_07931T0/1-551 PLASTSSATG FSAIPHLMIP STAQATLTNI LLSGVPTYGH TAPSPPPGLT BACU003405/1-872 PLASTSSATG FSAIPHLMIP STAQATLTNI LLSGVPTYGH TAPSPPPGLT 551 600 ENSTTRP00000016406/1-909 PVDVHINSMQ TESKKISASL NGHTQSPNIK YGAISTSSLG EKVLSANHGD ENSBTAP00000031316/1-870 PVDVHINTMQ AEGKKISAAL NGHTQSPSLK YGAISTSSLG EKVLSANHGD ENSP00000362993/1-974 PVDVHINSMQ TEGKKISAAL NGHAQSPDIK YGAISTSSLG EKVLSANHGD bmy_07931T0/1-551 PVDVHINSMQ TESKKISASL NGHTQSPNIK YGAISTSSLG EKVLSANHGD BACU003405/1-872 PVDVHINSMQ TESKKISASL NGHTQSPNIK YGAISTSSLG EKVLSANHGD 601 650 ENSTTRP00000016406/1-909 PSRQTTASEQ ASPKSNPAEG CNDAFVEVGM PRSPSHSGNA GDLKQMMGPS ENSBTAP00000031316/1-870 PSRQTAGSEQ TSPKSNPTEG CNDAFVEVGM PRSPSHSGNA GDLKQMMGPS ENSP00000362993/1-974 PSIQTSGSEQ TSPKSSPTEG CNDAFVEVGM PRSPSHSGNA GDLKQMMCPS bmy_07931T0/1-551 PSRQTTASEQ ASTKSNPAEG CNDAFVEVGM PRSPSHSGNA GDLKQMMGPS BACU003405/1-872 PSRQTTASEQ AATKSNPAEG CNDAFVEVGM PRSPSHSGNA GDLKQMMGPS 651 700 ENSTTRP00000016406/1-909 KVSCAKRQTV ELLQGTKNSH LHSTDRLLSE PELSTAESPL ADKKAPGSER ENSBTAP00000031316/1-870 KVACAKRQTV ELLQGTKNSH LHSTDRLLSD PELSAAESPL ADKKAPGSER ENSP00000362993/1-974 KVSCAKRQTV ELLQGTKNSH LHSTDRLLSD PELSATESPL ADKKAPGSER bmy_07931T0/1-551 KVSCAKRQTV ELLQGTKNSH L--------- ---------- ---------- BACU003405/1-872 KVSCAKRQTV ELLQGTKNSH LHSTDRLLSD PELSAAESPL ADKKAPGSER 701 750 ENSTTRP00000016406/1-909 AAERAAAAQQ NNERARLAPR PSYVNMQAFD YEQKKLLATK AMLKKPVVTE ENSBTAP00000031316/1-870 AAER--AAQQ NNERARLAPR PSYVNMQAFD YEQKKLLATK AMLKKPVVTE ENSP00000362993/1-974 AAERAAAAQQ NSERAHLAPR SSYVNMQAFD YEQKKLLATK AMLKKPVVTE bmy_07931T0/1-551 ---------- ---------- ---------- ---------- ---------- BACU003405/1-872 AAERAAAAQQ SSERARLAPR PSYVNMQAFD YEQKKLLATK AMLKKPVVTE 751 800 ENSTTRP00000016406/1-909 VRTPTNTWSG LGFSKSMPAE TIKELRRANH VSYKPTMTTT FEGSSVSLSR ENSBTAP00000031316/1-870 VRTPTNTWSG LGFSKSMPAE TIKELRRANH VSYKPTMTTT FEGSSMSLSR ENSP00000362993/1-974 VRTPTNTWSG LGFSKSMPAE TIKELRRANH VSYKPTMTTT YEGSSMSLSR bmy_07931T0/1-551 ---------- ---------- ---------- ---------- ---------- BACU003405/1-872 VRTPTNTWSG LGFSKSMPAE TIKELRRANH VSYKPTMTTT FEGSSMSLSR 801 850 ENSTTRP00000016406/1-909 SNSREHLGSG SESDNWRDRN GIGPASHSEF AASIGSPKRK QNKSTEHYLS ENSBTAP00000031316/1-870 SNSREHLGSG SESDNWRDRN GIGPASHGEF AASVGSPKRK QNKSTEHYLS ENSP00000362993/1-974 SNSREHLGGG SESDNWRDRN GIGPGSHSEF AASIGSPKRK QNKSTEHYLS bmy_07931T0/1-551 ---------- ---------- ---------- ---------- ---------- BACU003405/1-872 SNSREHLGSG SESDNWRDRN GIGPASHSEF AASIGSPKRK QNKSTEHYLS 851 900 ENSTTRP00000016406/1-909 SSNYMDCISS LTGSNGCNLN SSFKGSDLPE LFSKLGLGKY TDVFQQQEID ENSBTAP00000031316/1-870 SSNYMDCISS LTGSNGCNLS SSFKGSDLPE LFSKLGLGKY TDVFQQQEID ENSP00000362993/1-974 SSNYMDCISS LTGSNGCNLN SSFKGSDLPE LFSKLGLGKY TDVFQQQEID bmy_07931T0/1-551 ---------- ---------- ---------- ---------- ---------- BACU003405/1-872 SSNYMDCISS LTGSNGCNLN SSFKGSDLPE LFSKLGLGKY TDVFQQQEID 901 950 ENSTTRP00000016406/1-909 LQTFLTLTDQ DLKELGITTF GARRKMLLAI SELNKNRR-L FEPPNTRTSF ENSBTAP00000031316/1-870 LQTFLTLTDQ DLKELGITTF GARRKMLLAI SELNKNRRKL FEPPNTRTSF ENSP00000362993/1-974 LQTFLTLTDQ DLKELGITTF GARRKMLLAI SELNKNRRKL FESPNARTSF bmy_07931T0/1-551 ---------- ---------- ---------- ---------- ---------- BACU003405/1-872 LQTFLTLTDQ DLKELGITTF GARRKMLLAI SELNKNRRKL FEPPNTRTSF 951 1000 ENSTTRP00000016406/1-909 LECGASERLP RQYHSDIASV SGRW ENSBTAP00000031316/1-870 LEGGASGRLP RQYHADIASV SGRW ENSP00000362993/1-974 LEGGASGRLP RQYHSDIASV SGRW bmy_07931T0/1-551 ---------- ---------- ---- BACU003405/1-872 LEGGASGRLP RQYHSDIASV SGRW