KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:41:22 2014 Check: 00 .. Name: ENSTTRP00000014113/1-470 Len: 510 Check: 4824 Weight: 1.00 Name: ENSP00000297581/1-470 Len: 510 Check: 3474 Weight: 1.00 Name: bmy_00491T0/1-470 Len: 510 Check: 5360 Weight: 1.00 Name: ENSBTAP00000031398/1-510 Len: 510 Check: 1041 Weight: 1.00 // 1 50 ENSTTRP00000014113/1-470 MGVWTSGTNI FLSLWRTYVS PRRLGWMDFT RHLGACCFVA FISVGLLSGA ENSP00000297581/1-470 MGIWTSGTDI FLSLWEIYVS PRSPGWMDFI QHLGVCCLVA LISVGLLSVA bmy_00491T0/1-470 MGVWTSGTNI FLSLWRTYVS PRSLGWMDFT QHLGTCCFVA FISVGLLSGA ENSBTAP00000031398/1-510 MGVWTSGGNI FLSLWGTYVS PRSPGWMAFA QHAGVCCFVS FISVGLLSGA 51 100 ENSTTRP00000014113/1-470 FYWFLSSFIV FTTSWMVTCA LLCCSKHARC FLLLFFLSCG LREGRNALIT ENSP00000297581/1-470 ACWFLPSIIA AAASWIITCV LLCCSKHARC FILLVFLSCG LREGRNALIA bmy_00491T0/1-470 FSWFLSSFVV FTTSWMVTCA LLCCSKHARC FILLFFLSCG LREGRNALIT ENSBTAP00000031398/1-510 FYWFLSSLTV FITSWMATCV LLCCSKHARC FILLFFLSCG LREGRNALIA 101 150 ENSTTRP00000014113/1-470 AGTGMVIFGH VENIFHNFKG LLDSMTCNLR AKSFSIHFPL LKKYTEAIQW ENSP00000297581/1-470 AGTGIVILGH VENIFHNFKG LLDGMTCNLR AKSFSIHFPL LKKYIEAIQW bmy_00491T0/1-470 AGTGIVIFGH VENIFHNFKG LLDSMTCNLR AKSFSIHFPL LKKYIEAIQW ENSBTAP00000031398/1-510 AGTGVVIFGH VENIFHNFKG LLDSMTCNLR AKSFAIHFPL LKKYIEAIRW 151 200 ENSTTRP00000014113/1-470 IYGLATHLSL FDDLVSWNQT LEVSLFSPSQ ALEAQLNDTT YKALRVLYQV ENSP00000297581/1-470 IYGLATPLSV FDDLVSWNQT LAVSLFSPSH VLEAQLNDSK GEVLSVLYQM bmy_00491T0/1-470 IYGLATHLSL FDDLVSWNQT LEVSLFSPSQ ALEAQLNDTT DRALRVLYQV ENSBTAP00000031398/1-510 VYGLVTHLSL FDDLVSWNQT LEVSLFSPSQ ALEAQLNDTT DKALGVLYQM 201 250 ENSTTRP00000014113/1-470 VTATEVLSSL GRQLVALTGL LLVLLGTGLF MKRFLGSCGW KFENIYITRQ ENSP00000297581/1-470 ATTTEVLSSL GQKLLAFAGL SLVLLGTGLF MKRFLGPCGW KYENIYITRQ bmy_00491T0/1-470 VTATEVLSSL GQQLFALTGL LLVLLGTGLF MRRFLGSCGW KFENIYITRQ ENSBTAP00000031398/1-510 VMATEVLCSL GRQLLALTGL LLVLLGTGLF MKRFLDPCGW KFENIYLTRH 251 300 ENSTTRP00000014113/1-470 FVQFDERERH EQRPCVLPLN KQERKKYVVI PSFWLTPKDR KNLGLFFLPV ENSP00000297581/1-470 FVQFDERERH QQRPCVLPLN KEERRKYVII PTFWPTPKER KNLGLFFLPI bmy_00491T0/1-470 FVQFDERERH AQRPCVLPLN KQERKKYVII PSFWLTPKDR KNLGLFFLPV ENSBTAP00000031398/1-510 FVQLDERERR EQRPCVLPLN KQERKKYVVI PSFWLTPKDR RNLGLFFLPV 301 350 ENSTTRP00000014113/1-470 LTHLYIWVLF AAIDYLLYWL IFSISKHFQS LPGLEVHLKL HREXXXXXXX ENSP00000297581/1-470 LIHLCIWVLF AAVDYLLYRL IFSVSKQFQS LPGFEVHLKL HGEKQGTQDI bmy_00491T0/1-470 LTHLYIWVLF AAXDYLLYWL IFSVSKHFQS LPGLEVRLKL HREKQDAQDI ENSBTAP00000031398/1-510 LTHLYIWLLF AAIDYLLYSL IFSMSKHFQS LPGLEVRLKL HRQEQGTQDI 351 400 ENSTTRP00000014113/1-470 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000297581/1-470 IHDSSFNISV FEPNCIPKPK FLLSETWVPL SVILLILVML GLLSSILMQL bmy_00491T0/1-470 IHDSSFNISL FEPSCLPKPK LLLSKTWIPL SFILVILVML GLLSSILMQL ENSBTAP00000031398/1-510 IHASSFNISL FEPTCIPKPK LLLSKTWIPL SIILVILVTL GLLSSVLMQL 401 450 ENSTTRP00000014113/1-470 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXIHFW ENSP00000297581/1-470 KILVSASFYP SVERKRIQYL HAKLLKKRSK QPLGEVKRRL SLYLTKIHFW bmy_00491T0/1-470 KILVSASFYP NVQRERIQYL HAKLLKKRSK QPVGEVKRKL SLYFTKIHFW ENSBTAP00000031398/1-510 KILVSASFYP SVQRERMQYL HAKILKKRSK RPVGEVKGKL SLYFTKIHFW 451 500 ENSTTRP00000014113/1-470 LPVLKMIGKK QMDTASEDNL ---------- ---------- ---------- ENSP00000297581/1-470 LPVLKMIRKK QMDMASADKS ---------- ---------- ---------- bmy_00491T0/1-470 LPVLKMIGRK QMDIASEDNP ---------- ---------- ---------- ENSBTAP00000031398/1-510 LPVLKMIGKK QMDIASEDNP EETPHSSSST LCQQSFSSLQ MAALPHPQQE 501 550 ENSTTRP00000014113/1-470 ---------- ENSP00000297581/1-470 ---------- bmy_00491T0/1-470 ---------- ENSBTAP00000031398/1-510 RTAQQDPSAA