KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:41:24 2014 Check: 00 .. Name: ENSP00000359729/1-701 Len: 733 Check: 2950 Weight: 1.00 Name: ENSBTAP00000031479/1-702 Len: 733 Check: 3468 Weight: 1.00 Name: BACU005425/1-352 Len: 733 Check: 3816 Weight: 1.00 Name: ENSTTRP00000010809/1-701 Len: 733 Check: 1943 Weight: 1.00 Name: bmy_09188T0/1-502 Len: 733 Check: 5875 Weight: 1.00 // 1 50 ENSP00000359729/1-701 MARRGWRRAP LRRGV-GSSP RARRLMRPLW LLLAVGVFDW AGASDGGGGE ENSBTAP00000031479/1-702 MARRGWLRAP LRRGVDGGGP RARRLTRPLW LLLAVGVFGW ARASDGAGGE BACU005425/1-352 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010809/1-701 MSRRGWLRAP LRRGVGGGGP RARRLTLPLW LLLAVGVFRW AGASDGAGGE bmy_09188T0/1-502 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000359729/1-701 ARAMDEEIVS EKQAEESHRQ DSANLLIFIL LLTLTILTIW LFKHRRARFL ENSBTAP00000031479/1-702 ARAMDEEIVS EKQAEESHRQ DSANLLIFIL LLTLTILTIW LFKHRRARFL BACU005425/1-352 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010809/1-701 ARAMDEEIVS EKQAEESHRQ DSANLLIFIL LLTLTILTIW LFKHRRARFL bmy_09188T0/1-502 ---MDEEIVS EKQAEESHRQ DSANLLIFIL LLTLTILTIW LFKHRRARFL 101 150 ENSP00000359729/1-701 HETGLAMIYG ---------- ---------- ---------- -LLVGLVLRY ENSBTAP00000031479/1-702 HETGLAMIYG ---------- ---------- ---------- -LLVGLVLRY BACU005425/1-352 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010809/1-701 HETG-AMIYG ---------- ---------- ---------- -LLVGLVLRY bmy_09188T0/1-502 HETGLAMIYG KCLNPVSAPG APPLLCSPAA SPPLLALHGL RLLVGLVLRY 151 200 ENSP00000359729/1-701 GIHVPSDVNN VTLSCEVQSS PTTLLVNVSG KFYEYMLKGE ISSHELNNVQ ENSBTAP00000031479/1-702 GIHVPSDVNN VTLSCEVQSS PTTLLVNVSG KFYEYTLKGE ISSHELNNVQ BACU005425/1-352 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010809/1-701 GIHVPSDVNN VTLSCEVQSS PTTLLVNVSG KFYEYTLKGE ISSHELNNVQ bmy_09188T0/1-502 GIHVPSDVNN VTLSCEVQSS PTTLLVNVSG KFYEYTLKGE ISSHELNNVQ 201 250 ENSP00000359729/1-701 DNEMLRKVTF DPEVFFNILL PPIIFYAGYS LKRRHFFRNL GSILAYAFLG ENSBTAP00000031479/1-702 DNEMLRKVTF DPEVFFNILL PPIIFYAGYS LKRRHFFRNL GSILAYAFLG BACU005425/1-352 ---MLRKVTF DPEVFFNILL PPIIFYAGYS LKRRHFFRNL GSILAYAFLG ENSTTRP00000010809/1-701 DNEMLRKVTF DPEVFFNILL PPIIFYAGYS LKRRHFFRNL GSILAYAFLG bmy_09188T0/1-502 DNEMLRKVTF DPEVFFNILL PPIIFYAGYS LKRRHFFRNL GSILAYAFLG 251 300 ENSP00000359729/1-701 TAISCFVIGS IMYGCVTLMK VTGQLAGDFY FTDCLLFGAI VSATDPVTVL ENSBTAP00000031479/1-702 TAISCFVIGS IMYGCVTLMK VTGQLAGDFY FTDCLLFGAI VSATDPVTVL BACU005425/1-352 TAISCFVIGS IMYGCVTLMK VTGQLAGDFY FTDCLLFGAI VSATDPVTVL ENSTTRP00000010809/1-701 TAISCFVIGS IMYGCVTLMK VTGQLAGDFY FTDCLLFGAI VSATDPVTVL bmy_09188T0/1-502 TAISCFVIGS IMYGCVTLMK VTGQLAGDFY FTDCLLFGAI VSATDPVTVL 301 350 ENSP00000359729/1-701 AIFHELQVDV ELYALLFGES VLNDAVAIVL SSSIVAYQPA GDNSHTFDVT ENSBTAP00000031479/1-702 AIFHELQVDV ELYALLFGES VLNDAVAIVL SSSIVAYQPA GDNSHTFDVT BACU005425/1-352 AIFHELQVDV ELYALLFGES VLNDAVAIVL SS-------- ---------- ENSTTRP00000010809/1-701 AIFHELQVDV ELYALLFGES VLNDAVAIVL SSSIVAYQPA GDNSHTFDVT bmy_09188T0/1-502 AIFHELQVDV ELYALLFGES VLNDAVAIVL SS-------- ---------- 351 400 ENSP00000359729/1-701 AMFKSIGIFL GIFSGSFAMG AATGVVTALV TKFTKLREFQ LLETGLFFLM ENSBTAP00000031479/1-702 AMFKSIGIFL GIFSGSFAMG AATGVVTALV TKFTKLREFQ LLETGLFFLM BACU005425/1-352 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010809/1-701 AMFKSIGIFL GIFSGSFAMG AATGVVTALV TKFTKLREFQ LLETGLFFLM bmy_09188T0/1-502 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000359729/1-701 SWSTFLLAEA WGFTGVVAVL FCGITQAHYT YNNLSTESQH RTKQLFELLN ENSBTAP00000031479/1-702 SWSTFLLAEA WGFTGVVAVL FCGITQAHYT YNNLSTESQH RTKQLFELLN BACU005425/1-352 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010809/1-701 SWSTFLLAEA WGFTGVVAVL FCGITQAHYT YNNLSTESQH RTKQLFELLN bmy_09188T0/1-502 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000359729/1-701 FLAENFIFSY MGLTLFTFQN HVFNPTFVVG AFVAIFLGRA ANIYPLSLLL ENSBTAP00000031479/1-702 FLAENFIFSY MGLTLFTFQN HVFNPTFVVG AFIAIFLGRA ANIYPLSLLL BACU005425/1-352 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010809/1-701 FLAENFIFSY MGLTLFTFQN HVFNPTFVVG AFIAIFLGRA ANIYPLSLLL bmy_09188T0/1-502 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000359729/1-701 NLGRRSKIGS NFQHMMMFAG LRGAMAFALA IRDTATYARQ MMFSTTLLIV ENSBTAP00000031479/1-702 NLGRRSKIGS NFQHMMMFAG LRGAMAFALA IRDTATYARQ MMFSTTLLIV BACU005425/1-352 ----RSKIGS NFQHMMMFAG LRGAMAFALA IRDTATYARQ MMFSTTLLIV ENSTTRP00000010809/1-701 NLGRRSKIGS NFQHMMMFAG LRGAMAFALA IRDTATYARQ MMFSTTLLIV bmy_09188T0/1-502 ----RSKIGS NFQHMMMFAG LRGAMAFALA IRDTATYARQ MMFSTTLLIV 551 600 ENSP00000359729/1-701 FFTVWVFGGG TTAMLSCLHI RVGVDSDQEH LGVPENERRT TKAESAWLFR ENSBTAP00000031479/1-702 FFTVWVFGGG TTAMLSCLHI RVGVDSDQEH LGIPESERRT TKAESAWLFR BACU005425/1-352 FFTVWVFGGG TTAMLSCLHI RVGVDSDQEH LGIPESERRT TKAESAWLFR ENSTTRP00000010809/1-701 FFTVWVFGGG TTAMLSCLHI RVGVDSDQEH LGIPESERRT TKAESAWLFR bmy_09188T0/1-502 FFTVWVFGGG TTAMLSCLHI RVGVDSDQEH LGIPESERRT TKAESAWLFR 601 650 ENSP00000359729/1-701 MWYNFDHNYL KPLLTHSGPP LTTTLPACCG PIARCLTSPQ AYENQEQLKD ENSBTAP00000031479/1-702 MWYNFDHNYL KPLLTHSGPP LTTTLPACCG PIARCLTSPQ AYENQEQLKD BACU005425/1-352 I------CYL KPLLTHSGPP LTTTLPACCG PIARCLTSPQ AYENQEQLKD ENSTTRP00000010809/1-701 IWYNFDHNYL KPLLTHSGPP LTTTLPACCG PVARCLTSPQ AYENQEQLKD bmy_09188T0/1-502 I------CYL KPLLTHSGPP LTTTLPACCG PVARCLTSPQ AYENQEQLKD 651 700 ENSP00000359729/1-701 DDSDLILNDG DISLTYGDST VNTEPATSSA PRRFMGNSSE DALDRELAFG ENSBTAP00000031479/1-702 DDSDLILNDG DISLTYGDST VNTESASSGA PRRLMGNSSE DAFDRELAFG BACU005425/1-352 DDSDLILNDG DISLTYGDST VNTESASSGA PRRFMGNSSE DALDRELAFG ENSTTRP00000010809/1-701 DDSDLILNDG DISLTYGDST VNTESASSGA PRRFMGNSSE DALDRELAFG bmy_09188T0/1-502 DDSDLILNDG DISLTYGDST VNTESASSGA PRRFMGNSSE DALDRELAFG 701 750 ENSP00000359729/1-701 DHELVIRGTR LVLPMDDSEP PLNLLDNTRH GPA ENSBTAP00000031479/1-702 DHELVIRGTR LVLPMDDSEP PLNLLDNTRH GPA BACU005425/1-352 DHELVIRGTR LVLPMDDSEP PLNLLDNTRH RPA ENSTTRP00000010809/1-701 DHELVIRGTR LVLPMDDSEP PLNLLDNTGH GPA bmy_09188T0/1-502 DHELVIRGTR LVLPMDDSEP PLNLLDNTRH GPA