KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:41:25 2014 Check: 00 .. Name: ENSP00000380759/1-433 Len: 530 Check: 9365 Weight: 1.00 Name: ENSBTAP00000031501/1-434 Len: 530 Check: 7812 Weight: 1.00 Name: bmy_22506T0/1-270 Len: 530 Check: 1008 Weight: 1.00 Name: BACU004337/1-472 Len: 530 Check: 7929 Weight: 1.00 Name: ENSTTRP00000005461/1-434 Len: 530 Check: 9897 Weight: 1.00 // 1 50 ENSP00000380759/1-433 ---------- ---------- ---------- --------MA TSGDCPRSE- ENSBTAP00000031501/1-434 ---------- ---------- ---------- --------MA TPGDCPRNEL bmy_22506T0/1-270 ---------- ---------- ---------- ---------- ---------- BACU004337/1-472 MPLRAGGVDA NLSGETRLRN GGENETLKQQ LCADPKGIMA TPGDCPRSEL ENSTTRP00000005461/1-434 ---------- ---------- ---------- --------MA TPGDCPRSEL 51 100 ENSP00000380759/1-433 SQGEEPAECS EAGLLQEGVQ PEEFVAIADY AATDETQLSF LRGEKILILR ENSBTAP00000031501/1-434 QEEEDPTTQA EEEHLQGAVH PEEFVAIADY SATDETQLSF LRGEKILILR bmy_22506T0/1-270 ---------- ---------- ---------- ---------- ---------- BACU004337/1-472 QEGEDPAVQG EEGKLQGSVH PEEFVAIADY SATDETQLSF LRGEKILILR ENSTTRP00000005461/1-434 QEGEDPVVQG EEGNLQGTVH PEEFVAIADY SATDETQLSF SRGEKILILR 101 150 ENSP00000380759/1-433 QTTADWWWGE RAGCCGYIPA NHVGKHVDEY DPEDTWQDEE YFGSYGTLKL ENSBTAP00000031501/1-434 QTTADWWWGE RAGCCGYIPA NHLGKQLEDW DPEDSWQDEE YFGSYGTLKL bmy_22506T0/1-270 ---------- ---------- ---------- ---------- ---------- BACU004337/1-472 QTTADWWWGE RAGCCGYIPA NHLGKHVEDW GPEDSWQDEE YFGSYGTLKL ENSTTRP00000005461/1-434 QTTADWWWGE RAGCCGYIPA NHLGKHLEDW GPEDSWQDEE YFGSYGTLKL 151 200 ENSP00000380759/1-433 HLEMLADQPR TTKYHSVILQ NKESLTDKVI LDVGCGTGII SLFCAHYARP ENSBTAP00000031501/1-434 HLEMLADQPR TTKYHSVILQ NKESLKDKVI LDVGCGTGII SLFCAHYAQP bmy_22506T0/1-270 ---------- ---------- ---------- ---------- ---------- BACU004337/1-472 HLEMLADQPR TTKYHHVILQ NKESLKDKVI LDVGCGTGII SLFCAHYAQP ENSTTRP00000005461/1-434 HLEMLADQPR TTKYHNVILQ NKESLKDKVI LDVGCGTGII SLFCAHYAQP 201 250 ENSP00000380759/1-433 RAVYAVEASE MAQHTGQLVL QNGFADIITV YQQKVEDVVL PEKVDVLVSE ENSBTAP00000031501/1-434 RAVFAVEASE MAQHTGQLVV QNGFADIITV FQQKVEDVVL PEKVDVLVSE bmy_22506T0/1-270 ---------- ---------- ---------- ---------- ---------- BACU004337/1-472 RAVYAVEASE MAQHTGQLVM QNGFADVITV FQQKVEDVVL PEKVDVLVSE ENSTTRP00000005461/1-434 RAVYAVEASE MAQHTGQLVM QNGFADIITV FQQKVEDVLL PEKVDVLVSE 251 300 ENSP00000380759/1-433 WMGTCLLFEF MIESILYARD AWLKEDGVIW PTMAALHLVP CSADKDYRSK ENSBTAP00000031501/1-434 WMGTCLLFEF MIESILYARD AWLKEDGIIW PTTAALHLVP CSADKDYRSK bmy_22506T0/1-270 ---------- MIESILYARD AWLKEDGVIW PTTAALHLVP CSADRDYRSK BACU004337/1-472 WMGTCLLFEF MIESILYARD AWLKEDGVIW PTTAALHLVP CSADRDYRSK ENSTTRP00000005461/1-434 WMGTCLLFEF MIESILYARD AWLKEDGVIW PTTAALHLVP CSADRDYRSK 301 350 ENSP00000380759/1-433 VLFWDNAYEF NLSALKSLAV KEFFSKPKYN HILKPEDCLS EPCTILQLDM ENSBTAP00000031501/1-434 VLFWDNAYEF DLSPLKSLAI KEFFSKPKYN HILKPDDCLS EPCTILQLDM bmy_22506T0/1-270 VLFWDNAYEF DLSALKSLAI KEFFSKPKYN HILKPEDCLS EPCTILQLDM BACU004337/1-472 VLFWDNAYEF DLSALKSLAI KEFFSKPKYN HILKPEDCLS EPCTILQLDM ENSTTRP00000005461/1-434 VLFWDNAYEF DLSALKSLAI KEFFSKPKYN HILKPEDCLS EPCTILQLDM 351 400 ENSP00000380759/1-433 RTVQISDLET LRGELRFDIR KAGTLHGFTA WFSVHFQSLQ EGQPPQVLST ENSBTAP00000031501/1-434 RTVQVADLEM MKGELHFDIQ KAGMLHGFTA WFSVQFQNLE EDEPQLVLST bmy_22506T0/1-270 RTVQIADLEM MKGELHFDIK KAGTLHGFTA WFSVRFQNLE EDEPQLVLST BACU004337/1-472 RTVQIADLEM MKGELHFDIK KAGTLHGFTA WFSVRFQNLE EDEPQLVLST ENSTTRP00000005461/1-434 RTVQIADLEM MKGELHFDIK KAGTLHGFTA WFSVRFQNLE EDEPQLVLST 401 450 ENSP00000380759/1-433 GPFHPTTHWK QTLFMMDDPV PVHTGDVVTG SVVLQRNPVW RRHMSVALSW ENSBTAP00000031501/1-434 GPLHPTTHWK QVLFMMDEPV PVLVGDMVTG AVVLQRNPVW RRHMSVTLSW bmy_22506T0/1-270 GPLHPTTHWK QVLFMMDEPV SVLAGDVVTG SVVLQRNPVW RRHMSVTLSW BACU004337/1-472 GPLHPTTHWK QVLFMMDEPV SVLAGDVVTG SVVLQRNPVW RRHMSVTLSW ENSTTRP00000005461/1-434 GPLHPTTHWK QVLFMMDEPV SVLAGDVVTG SVVLQRNPVW RRHMSVTLSW 451 500 ENSP00000380759/1-433 AVTSRQDPTS QKV------G EKVFPI---- WR-------- ---------- ENSBTAP00000031501/1-434 SITSAQDPTL QKV------G EKVFPI---- WR-------- ---------- bmy_22506T0/1-270 SVTSRQDPGS QKVRYLAVES RAVVPVRAAG WRESLSHLEM TGAALCGMQR BACU004337/1-472 SVTSRQDPGS QKV------G EKVFPI---- WR-------- ---------- ENSTTRP00000005461/1-434 SVTSRQDPGS QKV------G EKVFPI---- WR-------- ---------- 501 550 ENSP00000380759/1-433 ---------- ---------- ---------- ENSBTAP00000031501/1-434 ---------- ---------- ---------- bmy_22506T0/1-270 LGGTDVTQWS RPWTGTRVLW KPRTCTRMGW BACU004337/1-472 ---------- ---------- ---------- ENSTTRP00000005461/1-434 ---------- ---------- ----------