KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:41:26 2014 Check: 00 .. Name: ENSTTRP00000013082/1-492 Len: 592 Check: 5698 Weight: 1.00 Name: ENSP00000412365/1-493 Len: 592 Check: 1922 Weight: 1.00 Name: ENSBTAP00000031525/1-569 Len: 592 Check: 1401 Weight: 1.00 Name: bmy_10637T0/1-489 Len: 592 Check: 319 Weight: 1.00 Name: BACU000793/1-569 Len: 592 Check: 9165 Weight: 1.00 // 1 50 ENSTTRP00000013082/1-492 ---------- ---------- --MEKYENLG LVGEGSYGMV MKCRNKDSGR ENSP00000412365/1-493 ---------- ---------- --MEKYENLG LVGEGSYGMV MKCRNKDTGR ENSBTAP00000031525/1-569 ---------- ---------- --MEKYENLG LVGEGSYGMV MKCRNKDSGR bmy_10637T0/1-489 MRPAVLLSVN LRKKNSYWFL IKMEKYENLG LVGEGSYGMV MKCRNKDSGR BACU000793/1-569 ---------- ---------- --MEKYENLG LVGEGSYGMV MKCRNKDSGR 51 100 ENSTTRP00000013082/1-492 IVAIKKFLES DDDKMVKKIA MREIKLLKQL RHENLVNLLE VWKKKKRWYL ENSP00000412365/1-493 IVAIKKFLES DDDKMVKKIA MREIKLLKQL RHENLVNLLE VCKKKKRWYL ENSBTAP00000031525/1-569 IVAIKKFLES DDDKMVKKIA MREIKLLKQL RHENLVNLLE VCKKKKRWYL bmy_10637T0/1-489 IVAIKKFLES DDDKMVKKIA MREIKLLKQL RHENLVNLLE VC-------- BACU000793/1-569 IVAIKKFLES DDDKMVKKIA MREIKLLKQL RHENLVNLLE VCKKKKRWYL 101 150 ENSTTRP00000013082/1-492 VFEFVDHTVL DDLELFPNGL DYQLAQKYLF QIISGIGFCH SHNIIHRDIK ENSP00000412365/1-493 VFEFVDHTIL DDLELFPNGL DYQVVQKYLF QIINGIGFCH SHNIIHRDIK ENSBTAP00000031525/1-569 VFEFVDHTVL DDLELSPNGL DYQLVQKYLF QVISGIGFCH SHNIIHRDIK bmy_10637T0/1-489 ---FTPH--- ---------- ---------- --------CF S--------- BACU000793/1-569 VFEFVDHTVL DDLELFPNGL DYQLAQKYLF QIISGIGFCH SHNIIHRDIK 151 200 ENSTTRP00000013082/1-492 PENILVSQSG VVKLCDFGFA RTLAAPGEVY TDYVATRWYR APELLVGDVK ENSP00000412365/1-493 PENILVSQSG VVKLCDFGFA RTLAAPGEVY TDYVATRWYR APELLVGDVK ENSBTAP00000031525/1-569 PENILVSQSG VVKLCDFGFA RTLAAPGEVY TDYVATRWYR APELLVGDVK bmy_10637T0/1-489 ---------- --------F- ---------- ---------- ---------- BACU000793/1-569 PENILISQSG VVKLCDFGFA RTLAAPGEVY TDYVATRWYR APELLVGDVK 201 250 ENSTTRP00000013082/1-492 YGXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XNLIPRHQEL ENSP00000412365/1-493 YGKAVDVWAI GCLVTEMFMG EPLFPGDSDI DQLYHIMMCL GNLIPRHQEL ENSBTAP00000031525/1-569 YGKAVDVWAI GCLVTEMLMG EPLFPGDSDI DQLYHIMVCL GNLIPRHQEL bmy_10637T0/1-489 --RAVDVWAI GCLVTEMLMG EPLFPGDSDI DQLYHIMVCL GNLIPRHQEL BACU000793/1-569 YGKAVDVWAI GCLVTEMLMG EPLFPGDSDI DQLYHIMVCL GNLIPRHQEL 251 300 ENSTTRP00000013082/1-492 FYKNPVFAGV RLPEIKETVP LERRYPRLPE VVIDLAKKCL HIDPDKRPFC ENSP00000412365/1-493 FNKNPVFAGV RLPEIKEREP LERRYPKLSE VVIDLAKKCL HIDPDKRPFC ENSBTAP00000031525/1-569 FYKNPVFAGV RLPEIKETVP LERRYPKLSE VVIDLAKKCL HIDPDKRPFC bmy_10637T0/1-489 FYKNPVFAGV RLPEIKETVP LERRYPRLPE VVIDLAKKCL HIDPDKRPFC BACU000793/1-569 FYKNPVFAGV RLPEIKETVP LERRYPRLPE VVIDLAKKCL HIDPDKRPFC 301 350 ENSTTRP00000013082/1-492 AELLHHDFFH MDGFAERFSQ ELQLKVQKDA RNISLSKKPQ NRKKEKEKDD ENSP00000412365/1-493 AELLHHDFFQ MDGFAERFSQ ELQLKVQKDA RNVSLSKKSQ NRKKEKEKDD ENSBTAP00000031525/1-569 AELLHHDFFH MDGFAERFPQ ELQLKVQKDV RNISLSKKSQ IRKKEKEKDE bmy_10637T0/1-489 AELLHHDFFH MDGFAERFSQ ELQLKVQKDA RNISLSKKPQ NRKKEKEKDD BACU000793/1-569 AELLHHDFFH MDGFAERFSQ ELQLKVQKDA RNISLSKKPQ NRKKEKEKDD 351 400 ENSTTRP00000013082/1-492 SLGEERKTLV VQDTNADPKI KDSKAFKIKG SKMDGEKVEK VSRASNASCL ENSP00000412365/1-493 SLVEERKTLV VQDTNADPKI KDYKLFKIKG SKIDGEKAEK GNRASNASCL ENSBTAP00000031525/1-569 SLGEERKTLV VQDTNADPQT KDSKVFKIKG SKTDGEKVEK ASRASNASCL bmy_10637T0/1-489 SLGEERKTLV VQDTNADPKI KDSKAFKIKG SKMDGEKVEK VSRASNASCL BACU000793/1-569 SLGEERKTLV VQDTNADPKI KASKAFKIKG SKMDGEKVEK VSRASNASCL 401 450 ENSTTRP00000013082/1-492 NDNGMSHIKT VPSTSLRDGS NGSVGHTRNP GMAIPPLTYN LSGVAPTVNS ENSP00000412365/1-493 HDSRTSHNKI VPSTSLKDCS NVSVDHTRNP SVAIPPLTHN LSAVAPSINS ENSBTAP00000031525/1-569 NDNGMSPVKI VPSTSLRDCS NGSVDQTRNP GMAIPPLTHN LSATAPTITS bmy_10637T0/1-489 NDNGMNHIKT VPSTSLRDCS NGSMGHTRNP GMAIPPLTYN LSAVAPTINS BACU000793/1-569 SDNGMSLIKT VPSTSLRDCS NGSMGHARNP GMAIPPLTYN LSAVAPTINS 451 500 ENSTTRP00000013082/1-492 GMGTIS-GVQ SYRVDEKTKK YCIPFAKPNK HSPAGVYNIN VTTS------ ENSP00000412365/1-493 GMGTETIPIQ GYRVDEKTKK CSIPFVKPNR HSPSGIYNIN VTTL------ ENSBTAP00000031525/1-569 GMGTIS-GIQ SYRVDEKTKK YCIPFVKPNK HSPPGAYNIN VTTLVASEKS bmy_10637T0/1-489 GMGTIS-RVQ SYRVDEKTKK YCIPFVKPNK HSPAGVYNIN VTTSVASEKS BACU000793/1-569 GVGTIS-RAQ SYRVDEKTKK YCIPFVKPNK HSPAGVYNIN VTTSVASEKS 501 550 ENSTTRP00000013082/1-492 ---------- ---------- ---------- ---------- ---------- ENSP00000412365/1-493 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000031525/1-569 LLQANKKRRE YSKTDVRLPE LNYNHLPELK ALEGIARNSR LIKKENKNLS bmy_10637T0/1-489 LLQANKKRRE YSKRDVRLPE LNYNHLPELK ALEGIARNSR LIKKENKNLS BACU000793/1-569 LLQANKKRRE YSKRDVRLPE LNYNHLPELK ALEGIARNSR LIKKENKNLS 551 600 ENSTTRP00000013082/1-492 ---------- ---------- -VSGSPLSDD SEADLPQVEH QH ENSP00000412365/1-493 ---------- ---------- -VSGPPLSDD SGADLPQMEH QH ENSBTAP00000031525/1-569 ESRIPSLATI DLHTPSIALQ QVSKSPLSDD SEADLPPVEH QH bmy_10637T0/1-489 VSRIPSLVAI DLHTFNTALH QVSGSPLSDD SEASLPRVEQ QH BACU000793/1-569 ESRIPSLVAI DLHTFNTALH QVSGSPLSDD SEANLPRVEH QH