KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:41:28 2014 Check: 00 .. Name: ENSTTRP00000004683/1-789 Len: 815 Check: 4081 Weight: 1.00 Name: ENSP00000362260/1-761 Len: 815 Check: 7068 Weight: 1.00 Name: ENSBTAP00000031537/1-761 Len: 815 Check: 309 Weight: 1.00 Name: BACU010284/1-768 Len: 815 Check: 4401 Weight: 1.00 Name: bmy_12460T0/1-815 Len: 815 Check: 4440 Weight: 1.00 // 1 50 ENSTTRP00000004683/1-789 MDSGGGSLGL HTSDSRMAHT MIMQDFXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000362260/1-761 MDSGGGSLGL HTPDSRMAHT MIMQDFVAGM AGTAHIDGDH IVVSVPEAVL ENSBTAP00000031537/1-761 MDPGGGSLGL HTSDSRMAHT MIMQDFVAGM TGTAHIDGDH IVVSVPEAVL BACU010284/1-768 MDSGGGSLGL HTSDSRMAHT MIMQDFVAGM AGTAHIDGDH IVVSVPEAVL bmy_12460T0/1-815 MDSGGGSLGL HTSDSRMAHT MIMQDFVAGM AGTAHIDGDH IVVSVPEAVL 51 100 ENSTTRP00000004683/1-789 XXXXXTDDGI TLDHGLAAEV VHWPDIITET DVVTEGVIVP EAVLEADVAI ENSP00000362260/1-761 VSDVVTDDGI TLDHGLAAEV VHGPDIITET DVVTEGVIVP EAVLEADVAI ENSBTAP00000031537/1-761 VSDVVTDGGI TLDHGLAAEV VHGPDIITET DVVTEGVIVP EAVLEADVAI BACU010284/1-768 VSDVVTDDGI TLDHGLAAEV VHGPDIITET DVVTEGVIVP EAVLEADVAI bmy_12460T0/1-815 VSDVVTDDGI TLDHGLAAEV VHGPDIITET DVVTEGVIVP EAVLEADVAI 101 150 ENSTTRP00000004683/1-789 EEDLEEDDGD HILTSELITE TVRVPEQVFV ADLVTGPDGH LEHVVQDCVS ENSP00000362260/1-761 EEDLEEDDGD HILTSELITE TVRVPEQVFV ADLVTGPNGH LEHVVQDCVS ENSBTAP00000031537/1-761 EEDLEEDDGD HILTSELITE TVRVPEQVFV ADLVTGPDGH LEHVVQDCVS BACU010284/1-768 EEDLEEDDGD HILTSELITE TVRVPEQVFV ADLVTGPDGH LEHVVQDCVS bmy_12460T0/1-815 EEDLEEDDGD HILTSELITE TVRVPEQVFV ADLVTGPDGH LEHVVQDCVS 151 200 ENSTTRP00000004683/1-789 GVDSPTMVSE EVLVTNSDTE TVIQAAGGVP GSTVTIKTE- -------DDD ENSP00000362260/1-761 GVDSPTMVSE EVLVTNSDTE TVIQAAGGVP GSTVTIKTE- -------DDD ENSBTAP00000031537/1-761 GVDSPTVVSE EVLVTNSDTE TVIQAAGGVP GSTVTIKTE- -------DDD BACU010284/1-768 GVDSPTMVSE EVLVTNSDTE TVIQAAGGFL GSTVTIKTE- DDDDDDDDDD bmy_12460T0/1-815 GVDSPTMVSE EVLVTNSDTE TVIQAAGGVP GSTVTIKTED DDDDDDDDDD 201 250 ENSTTRP00000004683/1-789 DDDVKSTSED YLMISLDDVG -KLEHMGNTP -KISSDGXXX XXXXXXXXXX ENSP00000362260/1-761 DDDVKSTSED YLMISLDDVG EKLEHMGNTP LKIGSDGSQE DAKEDGFGSE ENSBTAP00000031537/1-761 DDDVKSTSED YLMISLDDVG EKLEHMGNTP LKISSDGSQE DVKEDGFGSE BACU010284/1-768 DDDVKSTSED YLMISLDDVG EKLEHMGNTP LKISSDGSQE DVKEDGFGSE bmy_12460T0/1-815 DDDVKSTSED YLMISLDDVG EKLEHMGNTP LKISSDGSQE DVKEDGFGSE 251 300 ENSTTRP00000004683/1-789 XXXXXXXXXX XXXXXXXXGT EIVTESEYTN GHSVAGVLDQ SRMQREKMVY ENSP00000362260/1-761 VIKVYIFKAE AEDDVEIGGT EIVTESEYTS GHSVAGVLDQ SRMQREKMVY ENSBTAP00000031537/1-761 VIKVYIFKAE AEDDVEIGGT EIVTESEYTN GHSVAGVLDQ SRMQREKMVY BACU010284/1-768 VIKVYIFKAE AEDDVEIGGT EIVTESEYTN GHSVGGVLDQ SRMQREKMVY bmy_12460T0/1-815 VIKVYIFKAE AEDDVEIGGT EIVTESEYTN GHSVAGVLDQ SRMQREKMVY 301 350 ENSTTRP00000004683/1-789 MAVKDSSQEE DDISCAEIAD EVYMEVIVGE EEGTSLPETQ LEDSDVNKTI ENSP00000362260/1-761 MAVKDSSQEE DDIR------ ---------- ---------- ---------- ENSBTAP00000031537/1-761 MAVKDSSQEE DDIR------ ---------- ---------- ---------- BACU010284/1-768 MAVKDSSQEE DDIR------ ---------- ---------- ---------- bmy_12460T0/1-815 MAVKDSSQEE DDISCAEIAD EVYMEVIVGE EEGTSLPETQ LEDSDVNKTI 351 400 ENSTTRP00000004683/1-789 VPVVWAATY- ---------- -----GNALD STLENRSSTA AQYLQICDSI ENSP00000362260/1-761 ---------- DERRVSRRYE DCQASGNTLD SALESRSSTA AQYLQICDGI ENSBTAP00000031537/1-761 ---------- DERRVSRRYE DCQSSGNTLD STLENRSSTA AQYLQICDSI BACU010284/1-768 ---------- DERRVSRRYE DCQSSGNTLD STLENRSSTA AQYLQICDSI bmy_12460T0/1-815 VPVVWAATYG DERRVSRRYE DCQSSGNTLD STLENRSSTA AQYLQICDSI 401 450 ENSTTRP00000004683/1-789 NTNKVLKQKA KKRRRGEMRQ WQTXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000362260/1-761 NTNKVLKQKA KKRRRGETRQ WQTAVIIGPD GQPLTVYPCH ICTKKFKSRG ENSBTAP00000031537/1-761 NTNKVLKQKT KKRRRGETRQ WQTAVIIGPD GQPLTVYPCH ICTKKFKSRG BACU010284/1-768 NTNKVLKQKA KKRRRGETRQ WQTAVIIGPD GQPLTVYPCH ICTKKFKSRG bmy_12460T0/1-815 NTNKVLKQKA KKRRRGETRQ WQTAVIIGPD GQPLTVYPCH ICTKKFKSRG 451 500 ENSTTRP00000004683/1-789 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000362260/1-761 FLKRHMKNHP DHLMRKKYQC TDCDFTTNKK VSFHNHLESH KLINKVDKTH ENSBTAP00000031537/1-761 FLKRHMKNHP DHLMRKKYQC TDCDFTTNKK VSFHNHLESH KLINKVDKTH BACU010284/1-768 FLKRHMKNHP DHLMRKKYQC TDCDFTTNKK VSFHNHLESH KLINKVDKTH bmy_12460T0/1-815 FLKRHMKNHP DHLMRKKYQC TDCDFTTNKK VSFHNHLESH KLINKVDKTH 501 550 ENSTTRP00000004683/1-789 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XQGLLNRHLL ENSP00000362260/1-761 EFTEYTRRYR EASPLSSNKL ILRDKEPKMH KCKYCDYETA EQGLLNRHLL ENSBTAP00000031537/1-761 EFTEYTRRYR EASPLSSNKL ILRDKEPKMH KCKYCDYETA EQGLLNRHLL BACU010284/1-768 EFTEYTRRYR EASPLSSNKL ILRDKEPKMH KCKYCDYETA EQGLLNRHLL bmy_12460T0/1-815 EFTEYTRRYR EASPLSSNKL ILRDKEPKMH KCKYCDYETA EQGLLNRHLL 551 600 ENSTTRP00000004683/1-789 AVHSKNFPHV CVECGKGFRH HSELKKHMRT HTGEKPYQCQ YCVFRCADQS ENSP00000362260/1-761 AVHSKNFPHV CVECGKGFRH PSELKKHMRT HTGEKPYQCQ YCIFRCADQS ENSBTAP00000031537/1-761 AVHSKNFPHV CVECGKGFRH PSELKKHMRT HTGEKPYQCQ YCVFRCADQS BACU010284/1-768 AVHSKNFPHV CVECGKGFRH PSELKKHMRT HTGEKPYQCQ YCVFRCADQS bmy_12460T0/1-815 AVHSKNFPHV CVECGKGFRH PSELKKHMRT HTGEKPYQCQ YCVFRCADQS 601 650 ENSTTRP00000004683/1-789 NLKTHIKSKH GNNLPYKCEH CPQAFGDERE LQRHLDLFQG HKTHQCPHCD ENSP00000362260/1-761 NLKTHIKSKH GNNLPYKCEH CPQAFGDERE LQRHLDLFQG HKTHQCPHCD ENSBTAP00000031537/1-761 NLKTHIKSKH GNNLPYKCEH CPQAFGDERE LQRHLDLFQG HKTHQCPHCD BACU010284/1-768 NLKTHIKSKH GNNLPYKCEH CPQAFGDERE LQRHLDLFQG HKTHQCPHCD bmy_12460T0/1-815 NLKTHIKSKH GNNLPYKCEH CPQAFGDERE LQRHLDLFQG HKTHQCPHCD 651 700 ENSTTRP00000004683/1-789 HKSTNSSDLK RHIISVHTKD FPHKCEVCDK GFHRPSELKK HSDIHKGRKI ENSP00000362260/1-761 HKSTNSSDLK RHIISVHTKD FPHKCEVCDK GFHRPSELKK HSDIHKGRKI ENSBTAP00000031537/1-761 HKSTNSSDLK RHIISVHTKD FPHKCEVCDK GFHRPSELKK HSDIHKGRKI BACU010284/1-768 HKSTNSSDLK RHIISVHTKD FPHKCEVCDK GFHRPSELKK HSDIHKGRKI bmy_12460T0/1-815 HKSTNSSDLK RHIISVHTKD FPHKCEVCDK GFHRPSELKK HSDIHKGRKI 701 750 ENSTTRP00000004683/1-789 HQCRHCDFKT SDPFILSGHI LSVHTKDQSL KCKRCKRGFR QQNELKKHMK ENSP00000362260/1-761 HQCRHCDFKT SDPFILSGHI LSVHTKDQPL KCKRCKRGFR QQNELKKHMK ENSBTAP00000031537/1-761 HQCRHCDFKT SDPFILSGHI LSVHTKDQSL KCKRCKRGFR QQNELKKHMK BACU010284/1-768 HQCRHCDFKT SDPFILSGHI LSVHTKDQSL KCKRCKRGFR QQNELKKHMK bmy_12460T0/1-815 HQCRHCDFKT SDPFILSGHI LSVHTKDQSL KCKRCKRGFR QQNELKKHMK 751 800 ENSTTRP00000004683/1-789 THTGRKIYQC EYCEYSTTDA SGFKRHVISI HTKDYPHRCE FCKKGFRRPS ENSP00000362260/1-761 THTGRKIYQC EYCEYSTTDA SGFKRHVISI HTKDYPHRCE FCKKGFRRPS ENSBTAP00000031537/1-761 THSGRKIYQC EYCEYSTTDA SGFKRHVISI HTKDYPHRCE FCKKGFRRPS BACU010284/1-768 THTGRKIYQC EYCEYSTTDA SGFKRHVISI HTKDYPHRCE FCKKGFRRPS bmy_12460T0/1-815 THTGRKIYQC EYCEYSTTDA SGFKRHVISI HTKDYPHRCE FCKKGFRRPS 801 850 ENSTTRP00000004683/1-789 EKNQHIMRHH KEALM ENSP00000362260/1-761 EKNQHIMRHH KEALM ENSBTAP00000031537/1-761 EKNQHIMRHH KEALI BACU010284/1-768 EKNQHIMRHH KEALM bmy_12460T0/1-815 EKNQHIMRHH KEALM