KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:41:29 2014 Check: 00 .. Name: ENSTTRP00000009606/1-645 Len: 941 Check: 1499 Weight: 1.00 Name: ENSP00000358293/1-898 Len: 941 Check: 5533 Weight: 1.00 Name: ENSBTAP00000031558/1-920 Len: 941 Check: 7051 Weight: 1.00 Name: bmy_03054T0/1-864 Len: 941 Check: 9090 Weight: 1.00 Name: BACU004667/1-939 Len: 941 Check: 9527 Weight: 1.00 // 1 50 ENSTTRP00000009606/1-645 ---------- ---------- ---------- ---------- ---------- ENSP00000358293/1-898 ---------- ---------- ---------- ---------- -MSETDHIAS ENSBTAP00000031558/1-920 ---------- ---------- RCKTKIRSRF EDVHSESVPV SMSETEHIAS bmy_03054T0/1-864 ---------- ---------- ---------- ---------- -MSETEHIAS BACU004667/1-939 MAGGRGVGAQ KVELSCRALR RCKTKIRNSF EEVQSESVPV SMSETEHIAS 51 100 ENSTTRP00000009606/1-645 ---------- ---------- ---------- ---------- ---------- ENSP00000358293/1-898 TSSDKNVGKT PELKEDSCNL FSGNESSKLE NESKLLSLNT DKTLCQPNEH ENSBTAP00000031558/1-920 ISSDQNIEKT SETKEGSCNS SSGDESSSLE NESKLLSLNL DKTLCQPNEH bmy_03054T0/1-864 ISSDQNIEKT SEIKEDSCSS FSGDENSSLE NESKLLSLNF DKTLCQPNEH BACU004667/1-939 ISSDQNIEKT SEIKEDSCNS FSGDENSSLE NESKLLSLNF DKTLCQPNEH 101 150 ENSTTRP00000009606/1-645 ---------- ---------- ---------- ---------- ---------- ENSP00000358293/1-898 NNRIEAQENY IPDHGGGEDS CAKTDTGSEN SEQIANFPSG NFAKHISKTN ENSBTAP00000031558/1-920 NNQTETQENY IPDHGGGKDS CAKTDTGPES SEQIASFPGG DFTKQVLKTS bmy_03054T0/1-864 NNQIETQENY IPDHGGGEDS CAKTDICPEN SEQIANFPGG DFTKQVLKTN BACU004667/1-939 NNQIETQENY IPNHGGGEDS CAKTDICPEN SEQIANFPGG DFTKQVLKTN 151 200 ENSTTRP00000009606/1-645 ---------- ---------- ---------- ---------- ---------- ENSP00000358293/1-898 ETEQKVTQIL VELRSSTFPE SANEKTYSES PYDTDCTKKF ISKIKSVSAS ENSBTAP00000031558/1-920 EAEQTVTQIL AELRSSTFTA AGNQKTYSES PYDTDCTKKL ISKIKNVSTS bmy_03054T0/1-864 EAEQTVTQIL AELRSSTFSE AANQKTYSES PYDTDCTKKL ISKMKNVSTS BACU004667/1-939 EAEQTVTQIL AELRSSTFSE AANQKTYSES PYDTDCTKKL ISKMKNVSTS 201 250 ENSTTRP00000009606/1-645 ---------- ---------- ---------- ---------- ---------- ENSP00000358293/1-898 EDLLEEIESE LLSTEFA-EH RVPNGMNKGE HALVLFEKCV QDKYLQQEHI ENSBTAP00000031558/1-920 EDLLEEIESE LLSTEFAKEH RVPNGMNKGE NALIMFEKCV QDKYLQQEHT bmy_03054T0/1-864 EDLLEEIESE LLSTEFAKEH RLPNGMNKGE NALVMFEKCV QDKHLQQEHT BACU004667/1-939 EDLLEEIESE LLSTEFAKEH RLPNGMNKGE NALVMFEKCV QDKHLQQEHT 251 300 ENSTTRP00000009606/1-645 ---------- ---------- ---------- ---------- -----LESRI ENSP00000358293/1-898 IKKLIKENKK HQELFVDICS EKDNLREELK KRTETEKQHM NTIKQLESRI ENSBTAP00000031558/1-920 IKKRIRMSLK SKXLILDICS EKDNLREELK KRTETEKQHM NTIKQLETRI bmy_03054T0/1-864 IKKLIKENKK HQELILDICS EKDNLREELR KRTETEKQHM NTIKQLESRI BACU004667/1-939 IKKLIKENKK HQELILDICS EKDNLREELK KRTETEKQHM NTIKQLESRI 301 350 ENSTTRP00000009606/1-645 EELNKEVQAS KDKVLAQDIA TKNAVQQLHK EMAHRMEQAN KKCEEARQEK ENSP00000358293/1-898 EELNKEVKAS RDQLIAQDVT AKNAVQQLHK EMAQRMEQAN KKCEEARQEK ENSBTAP00000031558/1-920 EELNKEVQAS KDKVLAQDIA AKNAIQQLHK EMAHRMEQAN KKCEEARQEK bmy_03054T0/1-864 EELNKEVQAS KDKVLAQDTA TKNAIQQLHK EMAHRMEQAN KKCEEARQEK BACU004667/1-939 EELNKEVQAS KDKVLAQDTA TKNAVQQLHK EMAHRMEQAN KKCEEARQEK 351 400 ENSTTRP00000009606/1-645 EAMVMKYVRG EKESLDLRKE KEILEKKLRD ANKEYEKNTN KIKQLSQEKG ENSP00000358293/1-898 EAMVMKYVRG EKESLDLRKE KETLEKKLRD ANKELEKNTN KIKQLSQEKG ENSBTAP00000031558/1-920 EAMVMKYVRG EKESLDLRKE KEMLEKKLRD ANKECEKNTN KIKQLSQEKG bmy_03054T0/1-864 EAMVMKYVRG EKESLDLRKE KEILEKKLRD ANKEYEKNTN KIKQLSQEKG BACU004667/1-939 EAMVMKYVRG EKESLDLRKE KEILEKKLRD ANKEYEKNTN KIKQLSQEKG 401 450 ENSTTRP00000009606/1-645 RLHQLYETKE GETTRLVREI DKLKEDINSQ IIKVKWAQNK LKAEMDSHKE ENSP00000358293/1-898 RLHQLYETKE GETTRLIREI DKLKEDINSH VIKVKWAQNK LKAEMDSHKE ENSBTAP00000031558/1-920 RLHQLYETKE GEATRLIREI DKLKEDINSH IIKVKWAQNK LKAEMDSHKE bmy_03054T0/1-864 RLHQLYETKE GETTRLVREI DKLKEDINSH IIKVKWAQNK LKAEMDSHK- BACU004667/1-939 RLHQLYETKE GETTRLVREI DKLKEDINSH IIKVKWAQNK LKAEMDSHKE 451 500 ENSTTRP00000009606/1-645 TKDKLKETTT KLTQAKEEAD QIRKNCQDMI KTYQESEEIK SNELDAKLRV ENSP00000358293/1-898 TKDKLKETTT KLTQAKEEAD QIRKNCQDMI KTYQESEEIK SNELDAKLRV ENSBTAP00000031558/1-920 TKDKLKETTT KLTQAKEEAD QIRKNCQDMI KTYQESEEIK SNELDAKLRV bmy_03054T0/1-864 ---------- ---------- ---------- ----ESEEIK SNELDAKLRV BACU004667/1-939 TKDKLKETTT KLTQAKEEAD QIRKNCQDMI KTYQESEEIK SNELDAKLRV 501 550 ENSTTRP00000009606/1-645 TKGELEKQMQ EKSNQLEMHH AKIKELEDLK RTFKEGMDEL RTLRTKVKCL ENSP00000358293/1-898 TKGELEKQMQ EKSDQLEMHH AKIKELEDLK RTFKEGMDEL RTLRTKVKCL ENSBTAP00000031558/1-920 TKGELEKQMQ EKSDQLEMHH AKIKELEDLK RTFKEGMDEL RTLRTKVKCL bmy_03054T0/1-864 TKGELEKQMQ EKSDQLEMHH AKIKELEDLK RTFKEGMDEL RTLRTKVKCL BACU004667/1-939 TKGELEKQMQ EKSDQLEMHH AKIKELEDLK RTFKEGMDEL RTLRTKVKCL 551 600 ENSTTRP00000009606/1-645 EDERLRTEDE LSKYKEIINR QKAEIQNLLD KVKIAGQIQE QHQXXXXXXX ENSP00000358293/1-898 EDERLRTEDE LSKYKEIINR QKAEIQNLLD KVKTADQLQE QLQRGKQEIE ENSBTAP00000031558/1-920 EDERLRTEDE LSKYKEIINR QKAEIQNLLD KVKIADQIQE QHQRGKQEIE bmy_03054T0/1-864 EDERLRTEDE LSKYKEIINR QKAEIQNLLD KVKIADQIQE QHQRGKQEIE BACU004667/1-939 EDERLRTEDE LSKYKEIINR QKAEIQNLLD KVKIADQIQE QHQRGKQEIE 601 650 ENSTTRP00000009606/1-645 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000358293/1-898 NLKEEVESLN SLINDLQKDI EGSRKRESEL LLFTERLTSK NAQLQSESNS ENSBTAP00000031558/1-920 NLKEEVESLN SLINDLQKDI EGSRKRESEL LLFTEKLTSK NAQLQSESNS bmy_03054T0/1-864 NLKEEVESLN SLINDLQKDI EGSRKRESEL LLFTEKLTSK NAQLQSESNS BACU004667/1-939 NLKEEVESLN SLINDLQKDI EGSRKRESEL LLFTEKLTSK NAQLQSESNS 651 700 ENSTTRP00000009606/1-645 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000358293/1-898 LQSQFDKVSC SESQLQSQCE QMKQTNINLE SRLLKEEELR KEEVQTLQAE ENSBTAP00000031558/1-920 LQSQFDKLSC SESQLQSQCE HMKQTNMNLE SRLLKEEELR KEEVQALQAE bmy_03054T0/1-864 LQSQFDKLSC SESQLQSQCE HMKQTNINLE SRLLKEEELR KEEVQTLQAE BACU004667/1-939 LQSQFDKLSC SESQLQSQCE HMKQTNINLE SRLLKEEELR KEEVQTLQAE 701 750 ENSTTRP00000009606/1-645 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000358293/1-898 LACRQTEVKA LSTQVEELKD ELVTQRRKHA SSIKDLTKQL QQARRKLDQV ENSBTAP00000031558/1-920 LTCRQTEVKA LSTQVEELKD ELVTQRRKHA SSVKDLTKQL QQARRKLDQV bmy_03054T0/1-864 LTCRQTEVKA LSTQVEELKD ELVTQRRKHA SSVKDLTKQL QQARRKLDQV BACU004667/1-939 LTCRQTEVKA LSTQVEELKD ELVTQRRKHA SSVKDLTKQL QQARRKLDQV 751 800 ENSTTRP00000009606/1-645 GENGSYDKEV SSM-SRSSSS GSLNARSSAE DRSPENTGSS VAVDNFPEVD ENSP00000358293/1-898 -ESGSYDKEV SSMGSRSSSS GSLNARSSAE DRSPENTGSS VAVDNFPQVD ENSBTAP00000031558/1-920 -ENGSCDKEV SSMGSRSSSS GSLNARSSAE DRSPENTGSS VAVDNFPEVD bmy_03054T0/1-864 -ENGSYDKEV SSMGSRSSSS GSLNARSSAE DRSPENTGSS VAVDNFPEVD BACU004667/1-939 -ENGSYDKEV SSMGSRSSSS GSLNARSSAE DRSPENTGSS VAVDNFPEVD 801 850 ENSTTRP00000009606/1-645 KAMLIERIVR LQKAHARKNE KIEFMEDHIK QLVEEIRKKT KIIQSYVLRE ENSP00000358293/1-898 KAMLIERIVR LQKAHARKNE KIEFMEDHIK QLVEEIRKKT KIIQSYILRE ENSBTAP00000031558/1-920 KAMLIERIVR LQKAHARKNE KIEFMEDHIK QLVEEIRKKT KIIQSYILRE bmy_03054T0/1-864 KAMLIERIVR LQKAHARKNE KIEFMEDHIK QLVEEIRKKT KIIQSYILRE BACU004667/1-939 KAMLIERIVR LQKAHARKNE KIEFMEDHIK QLVEEIRKKT KIIQSYILRE 851 900 ENSTTRP00000009606/1-645 ESGTLSSEAS DFNKVHLSRR GGIMASLYTS HPADSGLTLE LSLEINRKLQ ENSP00000358293/1-898 ESGTLSSEAS DFNKVHLSRR GGIMASLYTS HPADNGLTLE LSLEINRKLQ ENSBTAP00000031558/1-920 ESGTLSSEAS DFNKVHLSRR GGIMASLYTS HPADTGLTLE LSLEINRKLQ bmy_03054T0/1-864 ESGTLSSEAS DFNKVHLSRR GGIMASLYTS HPADSGLTLE LSLEINRKLQ BACU004667/1-939 ESGTLSSEAS DFNKVHLSRR GGIMASLYTS HPADSGLTLE LSLEINRKLQ 901 950 ENSTTRP00000009606/1-645 AVLEDTLLKN ITLKENLQTL GTEIERLIKH QHDLEQRTKK T ENSP00000358293/1-898 AVLEDTLLKN ITLKENLQTL GTEIERLIKH QHELEQRTKK T ENSBTAP00000031558/1-920 AVLEDTLLKN ITLKENLQTL GTEIERLIKH QHELEQRTKK T bmy_03054T0/1-864 AVLEDTLLKN ITLKENLQTL GTEIERLIKH QHELEQRTKK T BACU004667/1-939 AVLEDTLLKN ITLKFKYTDY ATFLKEFTIG KNPLKSGSLE -