KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:41:31 2014 Check: 00 .. Name: ENSTTRP00000004649/1-452 Len: 457 Check: 1498 Weight: 1.00 Name: ENSBTAP00000031768/1-451 Len: 457 Check: 7901 Weight: 1.00 Name: ENSP00000373301/1-455 Len: 457 Check: 7273 Weight: 1.00 Name: bmy_17743T0/1-452 Len: 457 Check: 1776 Weight: 1.00 Name: BACU001547/1-454 Len: 457 Check: 6983 Weight: 1.00 // 1 50 ENSTTRP00000004649/1-452 MDAAPKRSRP EEPAELPPPA RDS--EEEEE -GMEPGLEEE EEVDPRIQGE ENSBTAP00000031768/1-451 MDAAPRRNRP EGPAERPPPA RDSEEEEEEE AGMEPGLADE EEVDPRIQGE ENSP00000373301/1-455 MDAALKRSRS EEPAEILPPA RDE-EEEEEE -GMEQGLEEE EEVDPRIQGE bmy_17743T0/1-452 MDAAPKRSRP EEPAELPPPA RDS--EEEEE -GMEPGLEEE EEVDPRIQGE BACU001547/1-454 MDAAPKQSRP EEPAELPPPA RDSEEEEEEE -GMEPGLEEE EEVDPGIQGE 51 100 ENSTTRP00000004649/1-452 LEKLNQSTDD INRRETELEX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000031768/1-451 LEKLNQSTDD INRRETELED IRQKFRSVLV EATVKLDELV KKIGKAVEDS ENSP00000373301/1-455 LEKLNQSTDD INRRETELED ARQKFRSVLV EATVKLDELV KKIGKAVEDS bmy_17743T0/1-452 LEKLNQSTDD INRRETELED IRQKFRSVLV EATVKLDELV KKIGKAVEDS BACU001547/1-454 LEKLNQSTDD INRRETELED IRQKFRSVLV EATVKLDELV KKIGKAVEDS 101 150 ENSTTRP00000004649/1-452 XXXXXXXXXX XXAQLEAQRA TQDFQRATEV LRAAKETISL AEQRLLEDDK ENSBTAP00000031768/1-451 KPYWEARRVA RQAQLEAQRA TQDFQRATEV LRAAKETISL AEQRLLEDDK ENSP00000373301/1-455 KPYWEARRVA RQAQLEAQKA TQDFQRATEV LRAAKETISL AEQRLLEDDK bmy_17743T0/1-452 KPYWEARRVA RQAQLEAQRA TQDFQRATEV LRAAKETISL AEQRLLEDDK BACU001547/1-454 KPYWEARRVA RQAQLEAQRA TQDFQRATEV LRAAKETISL AEQRLLEDDK 151 200 ENSTTRP00000004649/1-452 RQFDSAWQEM LNHATQRXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000031768/1-451 RQFDSAWQEM LNHATQRVME AEQTKTRSEL VHKETAARYN AAMGRMRQLE ENSP00000373301/1-455 RQFDSAWQEM LNHATQRVME AEQTKTRSEL VHKETAARYN AAMGRMRQLE bmy_17743T0/1-452 RQFDSAWQEM LNHATQRVME AEQTKTRSEL VHKETAARYN AAMGRMRQLE BACU001547/1-454 RQFDSAWQEM LNHATQRVME AEQTKTRSEL VHKETAARYN AAMGRMRQLE 201 250 ENSTTRP00000004649/1-452 XXXXXXXXXX XPYFELKAKY YMQLEQLKKT VDELQAKLAL AKGEYKTALR ENSBTAP00000031768/1-451 KKLKRAINKS KPYFELKAKY YLQLEQLKKT VDELQAKLAL AKGEYKTALR ENSP00000373301/1-455 KKLKRAINKS KPYFELKAKY YVQLEQLKKT VDDLQAKLTL AKGEYKMALK bmy_17743T0/1-452 KKLKRAINKS KPYFELKAKY YMQLEQLKKT VDELQAKLAL AKGEYKTALR BACU001547/1-454 KKLKRAINKS KPYFELKAKY YMQLEQLKKT VDELQAKLAL AKGEYKTALR 251 300 ENSTTRP00000004649/1-452 NLETISDEIH ERRRSSAMGP RGCGVGAEGG SPAAEDLSGR KPEPDAVSVA ENSBTAP00000031768/1-451 NLETISDEIH ERRRSGAMGP RGRGVGAEGG AVPAEGLSGR KPEADTVSVA ENSP00000373301/1-455 NLEMISDEIH ERRRSSAMGP RGCGVGAEGS STSVEDLPGS KPEPDAISVA bmy_17743T0/1-452 NLETISDEIH ERRRSSAMGP RGCGVGAEGG SPAAEDLSGR KPEPDAVSVA BACU001547/1-454 NLETISDEIH ERRRSSAMGP RGCGVGAEGG SPAAEDLSGR KPEPDAVSVA 301 350 ENSTTRP00000004649/1-452 SEAFEDDNCS TFVSEDDSET QSVSSFSSGP TSPSEMPEQF PAAVRPGSLD ENSBTAP00000031768/1-451 SEAFEDDNCS AFVSEDDSET QSLSSFSSGP TSPSEMPEQF PAAVRPASLD ENSP00000373301/1-455 SEAFEDDSCS NFVSEDDSET QSVSSFSSGP TSPSEMPDQF PAVVRPGSLD bmy_17743T0/1-452 SEAFEDDNCS TFVSEDDSET QSVSSFSSGP TSPSDMPEQF AAAVRPGSLD BACU001547/1-454 SEAFEDDNCS TFVSEDDSET QSVSSFSSGP TSPSEMPEQF AAAVRPGSLD 351 400 ENSTTRP00000004649/1-452 LPSPMSLSEF GMMFPVLGPR SECSGASSPE CEVERGDRAE GAENKASDRA ENSBTAP00000031768/1-451 LPSPVSLSEF GVLFPGLGPR SECSGASSPE CEVERGDRAE GAENKTVDKA ENSP00000373301/1-455 LPSPVSLSEF GMMFPVLGPR SECSGASSPE CEVERGDRAE GAENKTSDKA bmy_17743T0/1-452 LPSPMSLSEF GMMFPVLGPR SECSGASSPE CEVERGDRAE GAENKASDKA BACU001547/1-454 LPSPMSLSEF GMMFPVLGPR SECSGASSPE CEVERGDRAE GAENKASDKA 401 450 ENSTTRP00000004649/1-452 SNHQGLGSSS GDSG--ESPS STSPEGQALE DRMRQLSLQG SKGRDRVIED ENSBTAP00000031768/1-451 GSHRRLGSSS GDGG--RSPP K--PAGQALE DGVRRLSLRG P-GRAG-LTD ENSP00000373301/1-455 NNNRGLSSSS GSGGSSKSQS STSPEGQALE NRMKQLSLQC SKGRDGIIAD bmy_17743T0/1-452 SNHRGLGSSS GDSG--ESPS STSPESQALE DRMRQLSLQG SKGRDRVIAD BACU001547/1-454 SNHRGLGSSS GDSG--ESPS STSPEGQALE DRMRQLSLQG SKGRDRVIAD 451 500 ENSTTRP00000004649/1-452 INVVQIG ENSBTAP00000031768/1-451 THVVQIG ENSP00000373301/1-455 IKMVQIG bmy_17743T0/1-452 IDVVQIG BACU001547/1-454 IDVVQIG