KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:41:31 2014 Check: 00 .. Name: ENSP00000264992/1-679 Len: 786 Check: 2659 Weight: 1.00 Name: ENSBTAP00000031777/1-672 Len: 786 Check: 3985 Weight: 1.00 Name: ENSTTRP00000002774/1-675 Len: 786 Check: 3591 Weight: 1.00 Name: bmy_19409T0/1-561 Len: 786 Check: 6883 Weight: 1.00 Name: BACU001371/1-463 Len: 786 Check: 9206 Weight: 1.00 // 1 50 ENSP00000264992/1-679 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000031777/1-672 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002774/1-675 ---------- ---------- ---------- ---------- ---------- bmy_19409T0/1-561 FLGDLAPGPG APHPSAQSAP LASWNRAPRD VILGDFRFCS GGRAHVPGSP BACU001371/1-463 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000264992/1-679 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000031777/1-672 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002774/1-675 ---------- ---------- ---------- ---------- ---------- bmy_19409T0/1-561 GLPRLLWACG GGAGLLGGRS RWALPLRARG SRFEGLMVTV SVSKSAEVLY BACU001371/1-463 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000264992/1-679 ------MGIR GLMSFVEDHS NEFFTDLKLR DTKIVIDGYA LFHRLCFSSN ENSBTAP00000031777/1-672 ------MGIR GLMSFVEDHS NEFFTDVKLR DTKIIIDGYA LFHRLYFSSN ENSTTRP00000002774/1-675 -------GIR GLMSFVEDHI NEFFTDLKLR DTKIIIDGYA LFHRLCFSSN bmy_19409T0/1-561 AILQTVMGIR GLMSFVEDHS NEFFTDLKLR DTKIIIDGYA LFHRLCFSSN BACU001371/1-463 ------MGIR GLMSFVEDHS NEFFTDLKLR DTKIIIDGYA LFHRLCFGSN 151 200 ENSP00000264992/1-679 LDLRYGGDYD SFADVVQKFF ESLFACNICP YVVLDGGCDI SDKKLTTLKD ENSBTAP00000031777/1-672 LELRYGGDYD SFTDVVQKFF ESLFACKICP YVVLDGGCDI SDKKLNTLKD ENSTTRP00000002774/1-675 LELRYGGDYD SFTDVVEKFF ESLFACKICP YVVLDGGCDI SDKKLNTLKD bmy_19409T0/1-561 LELRYGGDYD SFTDVVEKFF ESLSACKICP YVVLDGGCDI SDKKLNTLKD BACU001371/1-463 LELRYGGDYD SFTDVVEKFF ESLSACKICP YVVLDGGCDI SDKKLNTLKD 201 250 ENSP00000264992/1-679 RAREKIQMAH SLSVGGSGYV CPLLIREVFI QVLIKLRVCF VQCFSEADRD ENSBTAP00000031777/1-672 RAREKIQMAH SLSVGGGGYV CPLLIREVFI QVLTKLQVCF VQCFSEADRD ENSTTRP00000002774/1-675 RAREKIQMAH SLSVGGGGYV CPLLIREVFI QVLIKLRVRF VQCFSEADRD bmy_19409T0/1-561 RAREKIQMAH SLSVGGGGYV CPLLIREVFI QVLIKLRVRF VQCFSEADRD BACU001371/1-463 RAREKIQMAH SLSVGGGGYV CPLLIREVFI QVLIKLRVRF VQCFSEADRD 251 300 ENSP00000264992/1-679 IMTLANHWNC PVLSSDSDFC IFDLKTGFCP LNSFQWRNMN TIKGTQN-YI ENSBTAP00000031777/1-672 IMTLANHWNC PVLSSDSDFC IFDLKSGFCP LNGFQWRNVN TIKGTRDRYI ENSTTRP00000002774/1-675 IMTLANHWNC PVLSSDSDFC IFDLKSGFCP LNSFQWRNMN TIKGTRDCYI bmy_19409T0/1-561 IMTLANHWNC PVLSSDSDFC IFDLKSGFCP LNSFQWRNMN TIKGTRDCYI BACU001371/1-463 IMTLANHWNC PVLSSDSDFC IFDLKSGFCP LNSFQWRNVN TIKGTRDCYI 301 350 ENSP00000264992/1-679 PAKCFSLDAF CHHFSNMNKA LLPLFAVLCG NDHVNLPIME TFLSKARLPL ENSBTAP00000031777/1-672 PAKCFFLDAL CCHFGIMNKT LLPLFAVLCG NDHVNLPVME TFLSKVRFPL ENSTTRP00000002774/1-675 PAKCFSLDAL CCHFGNMNKV LLPLFAVLCG NDHVNLPVVE TFLSKVCLPL bmy_19409T0/1-561 PAKCFSLDAL CCHFGNMNKV LLPLFAVLCG NDHVNLPVVE TFLSKVCLPL BACU001371/1-463 PAKCFSLDAL CCHFGNMNKV LLPLFAVLCG NDHVNLPVVE TFLSKVCLPL 351 400 ENSP00000264992/1-679 GATSSKGRRH HRILGLLNWL SHFANPTEAL DNVLKYLPKK DRENVKELLC ENSBTAP00000031777/1-672 GAANSKGRRH HRVLGLLNWL SRFADPTEAL DSVLNHLPKK RRGTVKELLC ENSTTRP00000002774/1-675 GAPSSKGRRH HRVLGLLNWL SRFADPTEAL DNVLKHLPRK SRGTVKKLLC bmy_19409T0/1-561 GAPSSKGRRH HRVLGLLNWL SRFADPTEAL DNVLKHLPGK SRGTVKKLLC BACU001371/1-463 GAPSSKGRRH HRVLGLLNWL SRFADPTEAL DNVLKHLPGK SRGTVKKLLC 401 450 ENSP00000264992/1-679 CSMEEYQQSQ VKLQDFFQCG TYVCPDALNL GLPEWVLVAL AKGQLSPFIS ENSBTAP00000031777/1-672 RSMEEYVQAQ GRLQDFFQHG AYTCPDTWNP GLPPWVLAAL ARGQLSPFIS ENSTTRP00000002774/1-675 GSMGEYLQSQ GRLQDFFQHG TYACPDTWNP GLPPWVLAAL ARGQLSPFIS bmy_19409T0/1-561 GSMGEYLQSQ GRLQDFFQHG AYACPDTWNP GLPPWVLAAL ARGQLSPFIS BACU001371/1-463 GSMGEYLQSQ GRLQDFFQHG AYACPDTWNP GLPPWVLAAL ARGQLSPFIS 451 500 ENSP00000264992/1-679 DALVLRRTIL PTQVENMQQP NAHRISQPIR QIIYGLLLNA SPHLDKTSWN ENSBTAP00000031777/1-672 DALVLRRTIL HTQVENMQRP NAHRISLPIR QVIYGLLVNA LPHVRNVAWD ENSTTRP00000002774/1-675 DALVLRRTIL HTQVENMQRP NAHRISLPIR QVIYGLLVNT PPHPGNVAWD bmy_19409T0/1-561 DALVLRRTIL HTQVENMQRP NAHRISLPIR QVIYGLLVNT PPHPGNVTWD BACU001371/1-463 DALVLRRTIL HTQVENMQRP NAHRISLPIR QVIYGLLVNT PPHPGNVTWD 501 550 ENSP00000264992/1-679 ALPPQPLAFS EVERINKNIR TSIIDAVELA KDHSDLSRLT ELSLRRRQML ENSBTAP00000031777/1-672 ALPPQPPTFS EVERINKNIK TSIVNAVELP KDHSDLSKLT ELSLASRQML ENSTTRP00000002774/1-675 ALPPQPPAFS EVERINKNIK TSIVGAVELP KDHSDLSKLT ELSLARRQIL bmy_19409T0/1-561 ALPPQPPTFS EVERINKNIK TSIVDAVELP KDHSDLSKLT EVSVCNTTAI BACU001371/1-463 ALPPQPPTFS EVERINKNIK TSIVDAVELP KDHSDLSKLT EVSVCNTTAV 551 600 ENSP00000264992/1-679 LLETLKVKQT ILEPIPTSLK LPIAVSCYWL QHTETKAKLH HLQSLLLTML ENSBTAP00000031777/1-672 LLETLKVKQS LLDPVPAALK LPVAVSCYWV QHAEATLKLH HLQALLLGML ENSTTRP00000002774/1-675 LLETLKVKQS ILDPIPAALK LPIAVSCYWV QHTEAKAKLH HLQALLLGML bmy_19409T0/1-561 SV-------- ---------- ---------- ---------- ---------- BACU001371/1-463 SV-------- ---------- ---------- ---------- ---------- 601 650 ENSP00000264992/1-679 VGPLIAIINS PGKEELQEDG AKMLYAEFQR VKAQTRLGTR LDLDTAHIFC ENSBTAP00000031777/1-672 LGPLRAMASS PEEKAVRGGG AETLYAELQR VKAPP--GTR LDLDTAHVFC ENSTTRP00000002774/1-675 MGPLHAMIIS PDEEAPQGGG AEMLYEELQR VKAQP--GLR LDLDTAHVFC bmy_19409T0/1-561 ---------- ---------- ---------- ---------- ---------- BACU001371/1-463 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000264992/1-679 QWQSCLQMGM YLNQLLSTPL PEPDLTRLYS GSLVHGLCQQ LLASTSVESL ENSBTAP00000031777/1-672 QWQCCLQMGL YLNQLLSTPL PEPDLTRLYS GSLVHGLCRQ LLTSASVESL ENSTTRP00000002774/1-675 QWQCCLQMGL YLNQLLSTPL PEPDLTRLYS GSLVHGLCQQ LLTSASVESL bmy_19409T0/1-561 ---------- ---------- ------KHFT GYKVL----- ---------- BACU001371/1-463 ---------- ---------- ------KHFT GYKVLSCVLS LLT------- 701 750 ENSP00000264992/1-679 LSICPEAKQL YEYLFNATRS YAPAEIFLPK GRSNSKKKRQ KKQNTSCSKN ENSBTAP00000031777/1-672 LRLCPEAQQL YEHLFSATRS CAPAELFLPK GKLNSKRRKQ KK-----SEN ENSTTRP00000002774/1-675 LHVCPEAQQL YEHMFSATRS CAPAELVLPK GK--TKKRRQ KKRRTPWSEN bmy_19409T0/1-561 ---------- ---------- ---------- ---------- ---------- BACU001371/1-463 ---------- ---------- ---------- ---------- ---------- 751 800 ENSP00000264992/1-679 RGRTTAHTKC WYEGNNRFGL LMVENLEEHS EASNIE ENSBTAP00000031777/1-672 RVGTTLNARS WHEGSNPFEL LMVETLENE- EAPELK ENSTTRP00000002774/1-675 RVGTTLNARS WHEGGNRFEL LMVGTLEEHM EAAELE bmy_19409T0/1-561 ---------- ---------- ---------- ------ BACU001371/1-463 ---------- ---------- ---------- ------