KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:41:35 2014 Check: 00 .. Name: ENSP00000369994/1-310 Len: 311 Check: 8334 Weight: 1.00 Name: ENSBTAP00000031835/1-272 Len: 311 Check: 9013 Weight: 1.00 Name: ENSTTRP00000010310/1-311 Len: 311 Check: 1035 Weight: 1.00 Name: bmy_13447T0/1-311 Len: 311 Check: 9838 Weight: 1.00 Name: BACU010450/1-306 Len: 311 Check: 3731 Weight: 1.00 // 1 50 ENSP00000369994/1-310 MAFPKMRLMY ICLLVLGALC LYFSMYSLNP FKEQSFVYKK D-GNFLKLPD ENSBTAP00000031835/1-272 ---------- ---------- ---------- -------FKQ E-VHLTQEKD ENSTTRP00000010310/1-311 MAYVKMRWIY ISLVVLGALC LYFSLDGLSP FKGEPLVFKN EGGSFLQLPD bmy_13447T0/1-311 MAYVKMRWIY ISLVVLGALC LYFSLYGLSP FKGGPLVFKN EVGNFLQLPD BACU010450/1-306 -----MRWIY ISLVVLGALC LYFSLDDLSP FKGEPLVFRN EGGNFLQLPD 51 100 ENSP00000369994/1-310 TDCRQTPPFL VLLVTSSHKQ LAERMAIRQT WGKERMVKGK QLKTFFLLGT ENSBTAP00000031835/1-272 IDCGQDPPFL ILLVASSHEQ WFVRLVIRST WGKEKIIKGK RIKTFFLLGT ENSTTRP00000010310/1-311 IDCRQDPPFL VLLVTSSHEQ MFARSVIRNT WGREKIVRGK RIKTFFLLGT bmy_13447T0/1-311 IDCRQDAPFL VLLVTSSHEQ MFARSVIRNT WGREKIVGGK RIKTFFLLGT BACU010450/1-306 IDCRQDAPFL VLLVTSSHEQ MFARSVIRNT WGREKIVGGK RIKTFFLLGT 101 150 ENSP00000369994/1-310 TSSAAETKEV DQESQRHGDI IQKDFLDVYY NLTLKTMMGI EWVHRFCPQA ENSBTAP00000031835/1-272 SPSKHISREV AKESQKFRDI IQKDFTDDYF NLTLKTMMGM QWIYSFCPQT ENSTTRP00000010310/1-311 TPSKGMSRAV SQESQQYHDI IQKDFVDVYS NLTLKTMMGM EWIYRFCPQA bmy_13447T0/1-311 TPSKDMSRAV AQESQQYRDI IQKDFMDVYF NLTLKTMMGM EWIYRFCPQA BACU010450/1-306 TPSKGMSRAV AQESQQYRDI IQKDFMDVYF NLTLKTMMGM EWIYRFCPQA 151 200 ENSP00000369994/1-310 AFVMKTDSDM FINVDYLTEL LLKKNRTTRF FTGFLKLNEF PIRQPFSKWF ENSBTAP00000031835/1-272 TFVMKTDSDM FVNIYYLTEL LLKKNRTTRF FTGFLKLNEY PIRKRFNKWF ENSTTRP00000010310/1-311 SFVMKTDSDM FVNIYYLTEL LLKKNRTTRF FTGYLKLNEY PIRKRYNKWF bmy_13447T0/1-311 SFVMKTDSDV FVNIYYLTEL LLKKNRTTRF FTGFLKLNEY PIRKRYNKWF BACU010450/1-306 SFVMKTDSDM FVNIYYLTEL LLKKNRTTRF FTGFLKLNEY PIRKRYNKWF 201 250 ENSP00000369994/1-310 VSKSEYPWDR YPPFCSGTGY VFSGDVASQV YNVSKSVPYI KLEDVFVGLC ENSBTAP00000031835/1-272 VSKYEYPWDK YPPFCSGTGY VFSSDVAGEV YHVANSVPFI KLEDVFVGLC ENSTTRP00000010310/1-311 VSKFEYPWDK YPPFCSGVGY VFSSDVAGQV YNVAESVPFI KLEDVFVGLC bmy_13447T0/1-311 VSKFEYPWDK YPPFCSGVGY VFSSDVAGQV YNVAASVPFL KLEDVFVGLC BACU010450/1-306 VSKFEYPWDK YPPFCSGVGY VFSSDVAGQV YNVAESVPFI KLEDVFVGLC 251 300 ENSP00000369994/1-310 LERLNIRLEE LHSQPTFFPG GLRFSVCLFR RIVACHFIKP RTLLDYWQAL ENSBTAP00000031835/1-272 LKRLKIRLEE LHSEQTFFPD GLPFTTCRYK KIVASHHIKP RDILRYWQAL ENSTTRP00000010310/1-311 LEKLQITLEE LHSKQTFFPN GLPFTICRYK KIVACHHIEP HNILLYWQAL bmy_13447T0/1-311 LEKLQIKLEE LHSKQTFFPS GLPFTICRYK KIVACHYIKP HNILVYWQAL BACU010450/1-306 LEKLQIKLEE LHSKQTFFPN GLPFTICRYK KIVACHYIKP HNILAYWQAL 301 350 ENSP00000369994/1-310 ENSRGEDCPP V ENSBTAP00000031835/1-272 PSLSKHKCHH - ENSTTRP00000010310/1-311 ENSLEEECPD I bmy_13447T0/1-311 ESSLEEECPD I BACU010450/1-306 ESSLDEECPD I