KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:41:36 2014 Check: 00 .. Name: ENSTTRP00000001181/1-443 Len: 491 Check: 4643 Weight: 1.00 Name: ENSBTAP00000031853/1-463 Len: 491 Check: 6281 Weight: 1.00 Name: BACU002200/1-451 Len: 491 Check: 5834 Weight: 1.00 Name: bmy_06401T0/1-446 Len: 491 Check: 776 Weight: 1.00 Name: ENSP00000473172/1-463 Len: 491 Check: 6299 Weight: 1.00 // 1 50 ENSTTRP00000001181/1-443 MATVTATTKV PEIRDVTRIE RIGAHSHIRG LGLDDALEPR QASQGMVGQL ENSBTAP00000031853/1-463 MATVTATTKV PEIRDVTRIE RIGAHSHIRG LGLDDALEPR QASQGMVGQL BACU002200/1-451 ---------- --IRDVTRIE RIGAHSHIRG LGLDDALEPR QASQGMVGQL bmy_06401T0/1-446 MATVTATTKV PEIRDVTRIE RIGAHSHIRG LGLDDALEPR QASQGMVGQL ENSP00000473172/1-463 MATVTATTKV PEIRDVTRIE RIGAHSHIRG LGLDDALEPR QASQGMVGQL 51 100 ENSTTRP00000001181/1-443 AARRAAGVVL EMIREGKIAG RAVLIAGQPG TGKTAIAMGM AQALGPDTPF ENSBTAP00000031853/1-463 AARRAAGVVL EMIREGKIAG RAVLIAGQPG TGKTAIAMGM AQALGPDTPF BACU002200/1-451 AARRAAGVVL EMIREGKIAG RAVLIAGQPG TGKTAIAMGM AQALGPDTPF bmy_06401T0/1-446 AARRAAGVVL EMIREGKIAG RAVLIAGQPG TGKTAIAMGM AQALGPDTPF ENSP00000473172/1-463 AARRAAGVVL EMIREGKIAG RAVLIAGQPG TGKTAIAMGM AQALGPDTPF 101 150 ENSTTRP00000001181/1-443 TAIAGSEIFS LEMSKTEALT QAFRRSIGVR IKEETEIIEG EVVEIQIDRP ENSBTAP00000031853/1-463 TAIAGSEIFS LEMSKTEALT QAFRRSIGVR IKEETEIIEG EVVEIQIDRP BACU002200/1-451 TAIAGSEIFS LEMSKTEALT QAFRRSIGVR IKEETEIIEG EVVEIQIDRP bmy_06401T0/1-446 TAIAGSEIFS LEMSKTEALT QAFRRSIGVR IKEETEIIEG EVVEIQIDRP ENSP00000473172/1-463 TAIAGSEIFS LEMSKTEALT QAFRRSIGVR IKEETEIIEG EVVEIQIDRP 151 200 ENSTTRP00000001181/1-443 ATGTGSKVGK LTLKTTEMET IYDLGTKMIE SLTKDKVQAG DVITIDKATG ENSBTAP00000031853/1-463 ATGTGSKVGK LTLKTTEMET IYDLGTKMIE SLTKDKVQAG DVITIDKATG BACU002200/1-451 ATGTGSKVGK LTLKTTEMET IYDLGTKMIE SLTKDKVQAG DVITIDKATG bmy_06401T0/1-446 ATGTGSKVGK LTLKTTEMET IYDLGTKMIE SLTKDKVQAG DVITIDKATG ENSP00000473172/1-463 ATGTGSKVGK LTLKTTEMET IYDLGTKMIE SLTKDKVQAG DVITIDKATG 201 250 ENSTTRP00000001181/1-443 KISKLGRSFT RARDYDAMGS QTKFVQCPDG ELQKRKEVVH TVSLHEIDVI ENSBTAP00000031853/1-463 KISKLGRSFT RARDYDAMGS QTKFVQCPDG ELQKRKEVVH TVSLHEIDVI BACU002200/1-451 KISKLGRSFT RARDYDAMGS QTKFVQCPDG ELQKRKEVVH TVSLHEIDVI bmy_06401T0/1-446 KISKLGRSFT RARDYDAMGS QTKFVQCPDG ELQKRKEVVH TVSLHEIDVI ENSP00000473172/1-463 KISKLGRSFT RARDYDAMGS QTKFVQCPDG ELQKRKEVVH TVSLHEIDVI 251 300 ENSTTRP00000001181/1-443 NSRTQGFLAL FSGDTGEIKS EVRQ------ ---------- ----VLFIDE ENSBTAP00000031853/1-463 NSRTQGFLAL FSGDTGEIKS EVREQINAKV AEWREEGKAE IIPGVLFIDE BACU002200/1-451 NSRTQGFLAL FSGDTGEIKS EVREQINAKV AEWREEGKAE IIPGVLFIDE bmy_06401T0/1-446 NSRTQGFLAL FSGDTGEIKS EVREQINAKV AEWREEGKAE IIPGVLFIDE ENSP00000473172/1-463 NSRTQGFLAL FSGDTGEIKS EVREQINAKV AEWREEGKAE IIPGVLFIDE 301 350 ENSTTRP00000001181/1-443 VHMLDIESFS FLNRALESDM APVLIMATNR GITRIRGTSY QSPHGIPIDL ENSBTAP00000031853/1-463 VHMLDIESFS FLNRALESDM APVLIMATNR GITRIRGTSY QSPHGIPIDL BACU002200/1-451 VHMLDIESFS FLNRALESDM APVLIMATNR GITRIRGTSY QSPHGIPIDL bmy_06401T0/1-446 VHMLDIESFS FLNRALESDM APVLIMATNR GIT------- ---------- ENSP00000473172/1-463 VHMLDIESFS FLNRALESDM APVLIMATNR GITRIRGTSY QSPHGIPIDL 351 400 ENSTTRP00000001181/1-443 LDRLLIVSTS PYSEKDTKQI LRIRCEEEDV EMSEDAYTVL TRIGLETSLR ENSBTAP00000031853/1-463 LDRLLIVSTS PYSEKDTKQI LRIRCEEEDV EMSEDAYTVL TRIGLETSLR BACU002200/1-451 LDRLLIVSTS PYSEKDTKQI LRIRCEEEDV EMSEDAYTVL TRIGLETSLR bmy_06401T0/1-446 ---------- ---------- ---RCEEEDV EMSEDAYTVL TRIGLETSLR ENSP00000473172/1-463 LDRLLIVSTT PYSEKDTKQI LRIRCEEEDV EMSEDAYTVL TRIGLETSLR 401 450 ENSTTRP00000001181/1-443 YAIQLITAAS LVCRKRKGTE VQVDDIKRVY SLFLDESRST QYMKEYQDAF ENSBTAP00000031853/1-463 YAIQLITAAS LVCRKRKGTE VQVDDIKRVY SLFLDESRST QYMKEYQDAF BACU002200/1-451 YAIQLITAAS LVCRKRKGTE VQVDDIKRVY SLFLDESRST QYMKEYQDAF bmy_06401T0/1-446 YAIQLITAAS LVCRKRK--- --VDDIKRVY SLFLDESRST QYMKEYQDAF ENSP00000473172/1-463 YAIQLITAAS LVCRKRKGTE VQVDDIKRVY SLFLDESRST QYMKEYQDAF 451 500 ENSTTRP00000001181/1-443 LFNELK---- ---------- ---------- ----GETMDT S ENSBTAP00000031853/1-463 LFNELK---- ---------- ---------- ----GETMDT S BACU002200/1-451 LFNELK---- ---------- ---------- ----GETMDT S bmy_06401T0/1-446 LFNELKREEG ARPGELRPCP RGHTDHVAFL LPTEGETMDT S ENSP00000473172/1-463 LFNELK---- ---------- ---------- ----GETMDT S