KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:41:37 2014 Check: 00 .. Name: ENSP00000456310/1-116 Len: 259 Check: 8661 Weight: 1.00 Name: ENSBTAP00000031886/1-203 Len: 259 Check: 2027 Weight: 1.00 Name: bmy_15979T0/1-145 Len: 259 Check: 3516 Weight: 1.00 Name: ENSTTRP00000014005/1-231 Len: 259 Check: 3886 Weight: 1.00 // 1 50 ENSP00000456310/1-116 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000031886/1-203 MKPETLLLAT TLLCTLLGLE PRSVIAGYPL SCEVCVGDGP NCRGKLQTCA bmy_15979T0/1-145 ---------- ---------S PALYTAGYPL SCEVCTGSGP TCSGNVQTCD ENSTTRP00000014005/1-231 ---------- ---------T LRGW-VGWRG AEGTSRRPTP TAAG-WGSCK 51 100 ENSP00000456310/1-116 ---------- ---------- ---------- ---------- -------MGP ENSBTAP00000031886/1-203 PDED------ SCIVVVTETN RKASLAVTSY KGCSKSSNCE SGLFGFTVNH bmy_15979T0/1-145 PDQD------ SCVVIVAHTN RKGHQSVNTY KGCMKSSACS SGFVSITMDP ENSTTRP00000014005/1-231 VGRDLEARVQ ARAALPSRHP AEGHQSLNTY KGCMKSSACS SGFISITMDP 101 150 ENSP00000456310/1-116 KDHMVTSSFC CQSDGCNSAF LS-------- ---------- ---------- ENSBTAP00000031886/1-203 ENYMGSKRRC CQKDGCNQDP LP-------- ---------- ---------- bmy_15979T0/1-145 ENYMVSNTRC CQSDVCNHDP LP-------- ---------- ---------- ENSTTRP00000014005/1-231 ENYMVSNTRC CQSDVCNHDP LPGKESLEPG KMQCPLATVP RVAVRERVRP 151 200 ENSP00000456310/1-116 ---------V PLTNLTENGL MCPACTASFR DKCMGPM-TH CTGKENHCVS ENSBTAP00000031886/1-203 ---------A FVRNHTENGL RCPSCITAFT ETCTATAEAL CVGEETHCVA bmy_15979T0/1-145 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014005/1-231 TPYTPPSSPA PENNRTENGL QCPTCITHFK ETCSSTKKVL CVGQESHCIT 201 250 ENSP00000456310/1-116 LSGHVQ-AGI FKPRFAMRGC ATESMCFTKP GAEVPTGTNV LFLHHIECTH ENSBTAP00000031886/1-203 MSGLMRPAGD ---KFAVQGC GTKTACHSKP GTLVPSGARL FTIKKTSCL- bmy_15979T0/1-145 --------SV ---IFATRGC ATENACHTKP GTLVPSASRI YTITQANCLP ENSTTRP00000014005/1-231 CAGKVQ-TGV ---IFATRGC ATENACHTKP GTLVPAASRI YTITQADCLP 251 300 ENSP00000456310/1-116 SP------- ENSBTAP00000031886/1-203 --------- bmy_15979T0/1-145 GPQPSGKAK ENSTTRP00000014005/1-231 GPQPPG---