KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:41:38 2014 Check: 00 .. Name: ENSTTRP00000014804/1-760 Len: 762 Check: 8757 Weight: 1.00 Name: ENSP00000282903/1-758 Len: 762 Check: 649 Weight: 1.00 Name: ENSBTAP00000031895/1-762 Len: 762 Check: 5632 Weight: 1.00 Name: bmy_07694T0/1-458 Len: 762 Check: 1159 Weight: 1.00 Name: BACU012787/1-759 Len: 762 Check: 1315 Weight: 1.00 // 1 50 ENSTTRP00000014804/1-760 MGRCAVQPR- -LLLLLLALV LQPWDPCLGA DSGKSSSIPT DKLLVITVAT ENSP00000282903/1-758 MGGCTVKPQ- ---LLLLALV LHPWNPCLGA DSEKPSSIPT DKLLVITVAT ENSBTAP00000031895/1-762 MGWCAVKTQQ LLLLLLAALV LQPWNPCLGA DSEKPSSIPT DKLLVITVAT bmy_07694T0/1-458 ---------- --MLILI--- ---------- ---------- ---------- BACU012787/1-759 MGRCAVQPR- --LLLLLALL LQPWDPCLGA DSGKSASIPT DKLLVITVAT 51 100 ENSTTRP00000014804/1-760 KESDGFHRFM QSAKYFNYTV KVLGQGKEWR GGDGINTIGG GQKVRLMKEV ENSP00000282903/1-758 KESDGFHRFM QSAKYFNYTV KVLGQGEEWR GGDGINSIGG GQKVRLMKEV ENSBTAP00000031895/1-762 KESDGFHRFM QSAKYFNYTV KVLGQGEEWR GGDGINTIGG GQKVRLMKEI bmy_07694T0/1-458 ---------- ---------- ---------- ---------- ---------- BACU012787/1-759 KESDGFHRFM QSAKYFNYTV KVLGQGKEWR GGDGINTIGG GQKVRLMKEV 101 150 ENSTTRP00000014804/1-760 MEHYASQEDL VVLFTECFNV IFAGGPEEVL KKFQKSNHKV VFAADGILWP ENSP00000282903/1-758 MEHYADQDDL VVMFTECFDV IFAGGPEEVL KKFQKANHKV VFAADGILWP ENSBTAP00000031895/1-762 MEHYANQEDL VVLFTECFNV IFAGGPEEVL KKFQKSNHKV VFAADGILWP bmy_07694T0/1-458 ---------- ------CFYV C--------- ---------- ---------- BACU012787/1-759 MEHYASQEDL VVLFTECFNV IFAGGPEEVL KKFQKSNHKV VFAADGILWP 151 200 ENSTTRP00000014804/1-760 DKRLADKYPI VHIGKRYLNS GGFIGYAPYI NRIVQQWNLQ DNDDDQLFYT ENSP00000282903/1-758 DKRLADKYPV VHIGKRYLNS GGFIGYAPYV NRIVQQWNLQ DNDDDQLFYT ENSBTAP00000031895/1-762 DKRLADKYPI VHIGKRYLNS GGFIGYAPYI NRIVQQWNLQ DNDDDQLFYT bmy_07694T0/1-458 ---------- ---------- ---------- ---------- ---------- BACU012787/1-759 DKRLADKYPI VHIGKRYLNS GGFIGYAPYI NRIVQQWNLQ DNDDDQLFYT 201 250 ENSTTRP00000014804/1-760 KIYIDPLKRE ALNITLDHKC KIFQTLNGAV DEVVLKFENG KARAKNVFYE ENSP00000282903/1-758 KVYIDPLKRE AINITLDHKC KIFQTLNGAV DEVVLKFENG KARAKNTFYE ENSBTAP00000031895/1-762 KIYIDPLKRE AINITLDHKC KIFQTLNGAV DEVVLKFENG KARAKNVFYE bmy_07694T0/1-458 ---------- -------HKT K--------- ---------- ---------- BACU012787/1-759 KIYIDPLKRE ALNITLDHKC KIFQTLNGAV DEVVLKFENG KARAKNVFYE 251 300 ENSTTRP00000014804/1-760 TLPVAINGNG PTKILLNYFG NYVPNAWTQD NGCTLCEVDT TDLSAVDVHP ENSP00000282903/1-758 TLPVAINGNG PTKILLNYFG NYVPNSWTQD NGCTLCEFDT VDLSAVDVHP ENSBTAP00000031895/1-762 TLPVMINGNG PTKILLNYFG NYIPNAWTQD NGCTFCEVDT IDLSAVDVYP bmy_07694T0/1-458 ---------- ---------- ---------- ---------- -------VHP BACU012787/1-759 TLPVVINGNG PTKILLNYFG NYVPNAWTQD SGCTLCEVDT IDLSAVDVHP 301 350 ENSTTRP00000014804/1-760 NVTIGVFIEQ PTPFLPRFLD ILLTLDYPKE AVKLFIHNKE VYHEKDIKVF ENSP00000282903/1-758 NVSIGVFIEQ PTPFLPRFLD ILLTLDYPKE ALKLFIHNKE VYHEKDIKVF ENSBTAP00000031895/1-762 NVTIGVFIEQ PTPFLPRFLN TLLTLDYPKE ALKFFIHNKE VYHEKDIKVF bmy_07694T0/1-458 NVTIGVFIEQ PTPFLPRFLD ILLTLDYPKE AVKLFIHNKE VYHEKDIKVF BACU012787/1-759 HVTIGVFIEQ PTPFLPRFLD ILLTLDYPKE AIKLFIHNKE VYHEKDIKVF 351 400 ENSTTRP00000014804/1-760 FDKAKHEITT MKIVGPEENL SQAEARNMGM DFCRQDENCD YYFSVDADVV ENSP00000282903/1-758 FDKAKHEIKT IKIVGPEENL SQAEARNMGM DFCRQDEKCD YYFSVDADVV ENSBTAP00000031895/1-762 FDKAKHEITT IKIVGPEENL SQAEARNMGM DFCRQDKNCE YYFSVDADVV bmy_07694T0/1-458 FDKAKHEITT MKIVGPEENL SQAEARNMGM DFCRQDENCD YYFSVDADVV BACU012787/1-759 FDKAKHEITT MKIVGPEENL SQAEARNMGM DFCRQDENCD YYFSVDADVV 401 450 ENSTTRP00000014804/1-760 LTNPRTLKIL IEQNRKIIAP LVTRHGKLWS NFWGALSPDG YYARSEDYVD ENSP00000282903/1-758 LTNPRTLKIL IEQNRKIIAP LVTRHGKLWS NFWGALSPDG YYARSEDYVD ENSBTAP00000031895/1-762 LTNPRTLKIL IEQNRKIIAP LVTRHGKLWS NFWGALSPDG YYARSEDYVD bmy_07694T0/1-458 LTNPRTLKIL IEQNRKIIAP LVTRHGKLWS NFWGALSPDG YYSRSEDYVD BACU012787/1-759 LTNPRTLKIL IEQNRKIIAP LVTRHGKLWS NFWGALSPDG YYARSEDYVD 451 500 ENSTTRP00000014804/1-760 IVQGNRVGIW NVPYMANVYL IKGKTLRSEM NERNYFVRDK LDPDMALCRN ENSP00000282903/1-758 IVQGNRVGVW NVPYMANVYL IKGKTLRSEM NERNYFVRDK LDPDMALCRN ENSBTAP00000031895/1-762 IVQGNRVGIW NVPYMANVYL IKGKTLRSEM IERNYFVRDK LDPDMALCRN bmy_07694T0/1-458 IVQGNRVGIW NVPYMANVYL IKGKTLRSEM NERNYFVRDK LDPDMALCRN BACU012787/1-759 IVQGNRVGIW NVPYMANVYL IKGKTLRSEM NERNYFVRDK LDPDMALCRN 501 550 ENSTTRP00000014804/1-760 AREMTLQREK DSPTPETFQM LRPPKGVFMY ISNRHEFGRL LSTANYNISH ENSP00000282903/1-758 AREMTLQREK DSPTPETFQM LSPPKGVFMY ISNRHEFGRL LSTANYNTSH ENSBTAP00000031895/1-762 AREMTLQREK DSPTPETFQM LSPPKGVFMY ISNRHEFGRL LSTANYNISH bmy_07694T0/1-458 AREM------ ---------- -----GVFMY ISNRHEFGRL LSTANYNISH BACU012787/1-759 AREMTLQREK DSPTPETFQM LRPPKGVFMY ISNRHEFGRL LSTANYNISH 551 600 ENSTTRP00000014804/1-760 YNNDLWQIFE NPVDWKEKYI NRDYSKIFTE NIVEQPCPDV FWFPIFSEKA ENSP00000282903/1-758 YNNDLWQIFE NPVDWKEKYI NRDYSKIFTE NIVEQPCPDV FWFPIFSEKA ENSBTAP00000031895/1-762 FNNDLWQIFE NPVDWKEKYI NRDYSKIFTE NIVEQPCPDV FWFPIFSEKA bmy_07694T0/1-458 YNNDLWQIFE NPVDWKEKYI NRDYSKIFTE NIVEQPCPDV FWFPIFSEKA BACU012787/1-759 YNNDLWQIFE NPVDWKEKYI NRDYSKIFTE NIVEQPCPDV FWFPIFSEKA 601 650 ENSTTRP00000014804/1-760 CDELVEEMEH YGQWSGGKHH XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000282903/1-758 CDELVEEMEH YGKWSGGKHH DSRISGGYEN VPTDDIHMKQ VDLENVWLHF ENSBTAP00000031895/1-762 CDELVEEMEH YGQWSGGKHH DSRISGGYEN VPTDDIHMKQ IGLENVWLHF bmy_07694T0/1-458 CDELVEEMEH YGQWSGGKHH DSRISGGYEN VPTDDIHMKQ IGLENVWLHF BACU012787/1-759 CDELVEEMEH YGQWSGGKHH DSRISGGYEN VPTDDIHMKQ IGLENVWLHF 651 700 ENSTTRP00000014804/1-760 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXN ENSP00000282903/1-758 IREFIAPVTL KVFAGYYTKG FALLNFVVKY SPERQRSLRP HHDASTFTIN ENSBTAP00000031895/1-762 IREFIAPVTL KVFAGYYTKG FALLNFVVKY SPERQRSLRP HHDASTFTIN bmy_07694T0/1-458 IREFIAPVTL KVFAGYYTKG FALLNFVVKY SPERQRSLRP HHDASTFTIN BACU012787/1-759 IREFIAPVTL KVFAGYYTKG FALLNFVVKY SPERQRSLRP HHDASTFTIN 701 750 ENSTTRP00000014804/1-760 IALNNVGEDF QGGGCKFLRY NCSIESPRKG WSFMHPGRLT HLHEGLPVKN ENSP00000282903/1-758 IALNNVGEDF QGGGCKFLRY NCSIESPRKG WSFMHPGRLT HLHEGLPVKN ENSBTAP00000031895/1-762 IALNNVGEDF QGGGCKFLRY NCSIESPRKG WSFMHPGRLT HLHEGLPVKN bmy_07694T0/1-458 IALNNVGEDF QGGGCKFLRY NCSIESPRKG WSFMHPGRLT HLHEGLPVKN BACU012787/1-759 IALNNVGEDF QGGGCKFLRY NCSIESPRKG WSFMHPGRLT HLHEGLPVKN 751 800 ENSTTRP00000014804/1-760 GTRYIAVSFI DP ENSP00000282903/1-758 GTRYIAVSFI DP ENSBTAP00000031895/1-762 GTRYIAVSFI DP bmy_07694T0/1-458 GTRYIAVSFI DP BACU012787/1-759 GTRYIAVSFI DP