KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:41:38 2014 Check: 00 .. Name: ENSP00000221418/1-328 Len: 330 Check: 2339 Weight: 1.00 Name: ENSBTAP00000031937/1-328 Len: 330 Check: 1178 Weight: 1.00 Name: bmy_16326T0/1-316 Len: 330 Check: 3724 Weight: 1.00 Name: ENSTTRP00000011174/1-327 Len: 330 Check: 2339 Weight: 1.00 // 1 50 ENSP00000221418/1-328 MAAGIVASRR LRDLLTRRLT GSNYPGLSIS LRLTGSSAQE EASGVALGEA ENSBTAP00000031937/1-328 MAAAFAAVRR FGNLLIPRLT ASSNLGL--N LRPMSAFTQE EASKASPEEA bmy_16326T0/1-316 --------MA LPSFISPGLT ARTNLGLSLN LHPMSSFAQD EASKAAPEEA ENSTTRP00000011174/1-327 MAAVIPASRR LRNLLTCR-T ARINLGLSLN LHPLSSFAQD EPSKAAPEEA 51 100 ENSP00000221418/1-328 PDHSYESLRV TSAQKHVLHV QLNRPNKRNA MNKVFWREMV ECFNKISRDA ENSBTAP00000031937/1-328 PGHSYESLRV TAAQKHVLHV QLNRPEKRNA MNKAFWREMV VCFNKIAEDS bmy_16326T0/1-316 PGHSYESLRV TSAQKHILHV QLNRPEKRNA MNKAFWSEMV VCFNKIAEDA ENSTTRP00000011174/1-327 PGHSYESLRV TSAQKHILHV QLNRPEKRNA MNKAFWSEMV VCFNKIAEDA 101 150 ENSP00000221418/1-328 DCRAVVISGA GKMFTAGIDL MDMASDILQP KGDDVARISW YLRDIITRYQ ENSBTAP00000031937/1-328 DCRVVVISGA GKMFSSGIDL MDMASDLLQP AGDDSARISW HLHSLLTRYQ bmy_16326T0/1-316 DCRAVVISGA GKMFTSGIDF VDMASGLLQP AGDDVARISW HLHSLLSRYQ ENSTTRP00000011174/1-327 DCRAVVISGA GKMFTSGIDF VDMASGLLQP AGDDVARISW HLHSLLSRYQ 151 200 ENSP00000221418/1-328 ETFNVIERCP KPVIAAVHGG CIGGGVDLVT ACDIRYCAQD AFFQVKEVDV ENSBTAP00000031937/1-328 ETFSVIEKCP KPVIAAIHGG CIGGGVDLIT ACDIRYSTRD SFFQVKEVDV bmy_16326T0/1-316 ETFS----CP KPVIGAIHGG CIGAGVDLIT ACDIRYCTQD ASFQVKEVDL ENSTTRP00000011174/1-327 ETFSVIEKCP KPVIGAIHGG CIGAGVDLIT ACDIRYCTQD ASFQVKEVDL 201 250 ENSP00000221418/1-328 GLAADVGTLQ RLPKVIGNQS LVNELAFTAR KMMADEALGS GLV--SRVFP ENSBTAP00000031937/1-328 GLAADVGTLQ RLPKVIGNQS LVNELAYTAR KMMADEALES GLVSLSRLFP bmy_16326T0/1-316 GLAADVGTLQ RLPRVIGNQS LVNELAFTAR KMMADEALES GLV--SRVFP ENSTTRP00000011174/1-327 GLAADVGTLQ RLPRVIGNQX XXXXXXXXXX XXXXXXXXXX XXX--XRVFP 251 300 ENSP00000221418/1-328 DKEVMLDAAL ALAAEISSKS PVAVQSTKVN LLYSRDHSVA ESLNYVASWN ENSBTAP00000031937/1-328 DKESMLDAAF TLAAEISSKS PVAVQSTKIN LIYSRDHSVM ESLNYMKSWN bmy_16326T0/1-316 DKEVMLDAAF ALAAEISSKS PVAVQSTKIN LLYSRDHSVT DSLNFMKSWN ENSTTRP00000011174/1-327 DKEVMLDAAF ALAAEISSKS PVAVQSTKIN LLYSRDHSVT DSLNFMKSWN 301 350 ENSP00000221418/1-328 MSMLQTQDLV KSVQATTENK ELKTVTFSKL ENSBTAP00000031937/1-328 MSMLQTKDIM KSVQAAIEKK DLKTVSFSKL bmy_16326T0/1-316 MSMLQTEDVV KSLQALMEKK ELKTITFSKL ENSTTRP00000011174/1-327 MSMLQTEDVV KSLQALMEKK ELKTITFSKL