KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:41:41 2014 Check: 00 .. Name: ENSP00000362937/1-452 Len: 458 Check: 4949 Weight: 1.00 Name: ENSTTRP00000001743/1-445 Len: 458 Check: 609 Weight: 1.00 Name: ENSBTAP00000032002/1-422 Len: 458 Check: 7111 Weight: 1.00 Name: bmy_08012T0/1-405 Len: 458 Check: 8732 Weight: 1.00 Name: BACU003264/1-421 Len: 458 Check: 4294 Weight: 1.00 // 1 50 ENSP00000362937/1-452 MSPKRIAKRR SPPADAIPKS KKVKD----- TRAAASRRVP GARSCQGACG ENSTTRP00000001743/1-445 MPPKRITKRR SPPEDALPKS KKVKDPGNQA VRVVASRRVP GARSCQGACG ENSBTAP00000032002/1-422 MPPKRIAKRR SPPEDALPKS KKVK------ ---------- ---------- bmy_08012T0/1-405 MPPKRITKRR SSPEDALPKS KKVKDPRNQA VRAVASRRVP GARSCQGACG BACU003264/1-421 MPPKRITKRR SSPEDALPKS KKVK------ ---------- ---------- 51 100 ENSP00000362937/1-452 PSPPDQKTRP VSHRSHSTEP GLVLTLGQGD VGQLGLGENV MERKKPALVS ENSTTRP00000001743/1-445 PSPPDQKARP VSHRSHNTEP GLVLTLGQGD VGQLGLGENV MERKKPALVP ENSBTAP00000032002/1-422 ---------- VSHRSHGTEP GVVLTLGQGD VGQLGLGENV MERKKPALVS bmy_08012T0/1-405 PSPPDQKARP VSHRSHNTEP GLVLTLGQGD VGQLGLGENV MERKKPALVP BACU003264/1-421 ---------- VSHRSHNTEP GLVLTLGQGD VGQLGLGENV MERKKPALVP 101 150 ENSP00000362937/1-452 IPEDVVQAEA GGMHTVCLSK SGQVYSFGCN DEGALGRDTS VEGSEMVPGK ENSTTRP00000001743/1-445 ILEDIVQAEA GGMHTVCLSK SGQVYSFGCN DEGAL-EDTS VEGSEMVPKV ENSBTAP00000032002/1-422 IPEDIVQAEA GGMHTVCLSK SGQVYSFGCN DEGALGRDTS VEGSEMVPGK bmy_08012T0/1-405 IPEDIVQAEA GGMHTVCLSK SGQVYSFGCN DEGALGRDTS VEGSEMVPGK BACU003264/1-421 IPEDIVQAEA GGMHTVCLSK SGQVYSFGCN DEGALGRDTS VEGSEMVPGK 151 200 ENSP00000362937/1-452 VELQEKVVQV SAGDSHTAAL TDDGRVFLWG SFRDNNGVIG LLEPMKKSMV ENSTTRP00000001743/1-445 LQR----VQV SA-DSHT-VL TD--RV---S GSRDNNGVIG LLEPMKKSMV ENSBTAP00000032002/1-422 VDLQEKVIQV SAGDSHTAAL TEDGRVFLWG SFRDNNGVIG LLEPMKKSMV bmy_08012T0/1-405 VELQEKVIQV SAGDSHTAAL TEDGRVFLWG SFRDNNGVIG LLEPMKKSMV BACU003264/1-421 VELQEKVIQV SAGDSHTAAL TEDGRVFLWG SFRDNNGVIG LLEPMKKSMV 201 250 ENSP00000362937/1-452 PVQVQLDVPV VKVASGNDHL VMLTADGDLY TLGCGEQGQL GRVPELFANR ENSTTRP00000001743/1-445 PVQVQLSTPV VKVASGNDHL VMLTVDGDLC TLGCGEQGQL GRVPELFANR ENSBTAP00000032002/1-422 PVQVQLSVPV VKVASGNDHL VMLTVDGDLY TLGSGEQGQL GRVPELFANR bmy_08012T0/1-405 PVQVQLSMPV VKVASGNDHL VMLTVDGDLY TLGCGEQGQL GRVPELFANR BACU003264/1-421 PVQVQLSTPV VKVASGNDHL VMLTVDGDLY TLGCGEQGQL GRVPELFANR 251 300 ENSP00000362937/1-452 GGRQGLERLL VPKCVMLKSR GSRGHVRFQD AFCGAYFTFA ISHEGHVYGF ENSTTRP00000001743/1-445 GGRQGLERLL VPKCVMLKSR GSRGHVRFQD AFCGAYFTFA ISSEGHVYGF ENSBTAP00000032002/1-422 GGRQGLERLL VPKCVMLKSR GSRGHVRFQD AFCGAYFTFA ISSEGHVYGF bmy_08012T0/1-405 GGRQG----- ---------- ---------- ---------- ---------- BACU003264/1-421 GGRQGLERLL VPKCVMLKSR GSRGHVRFQD AFCGAYFTFA ISSEGHVYGF 301 350 ENSP00000362937/1-452 GLSNYHQLGT PGTESCFIPQ NLTSFKNSTK SWVGFSGGQH HTVCMDSEGK ENSTTRP00000001743/1-445 GLSNYHQLGT PGTESCFVPQ NLTSFKNSTK SWVGFSGGQH HTVCMDSEGR ENSBTAP00000032002/1-422 GLSNYHQLGT QGTESCFVPQ NLTSFKNSTK SWVGFSGGQH HTVCMDSEGK bmy_08012T0/1-405 -------LGT PGTESCFVPQ NLTSFKNSTK SWVGFSGGQH HTVCMDSEGR BACU003264/1-421 GLSNYHQLGT PGTESCFVPQ NLTSFKNSTK SWVGFSGGQH HTVCMDSEGR 351 400 ENSP00000362937/1-452 AYSLGRAEYG RLGLGEGAEE KSIPTLISRL PAVSSVACGA SVGYAVTKDG ENSTTRP00000001743/1-445 AYSLGRAEYG RLGLGEGAEE KSVPTLISRL PAVSSVACGA SVGYAVTKDG ENSBTAP00000032002/1-422 AYSLGRAEYG RLGLGEGAEE KSVPTLIPRL PTVSSVACGA SVGYAVTKDG bmy_08012T0/1-405 AYSLGRAEYG RLGLGEGAEE KSIPTLISRL PAVCSVACGA SVGYAVTKDG BACU003264/1-421 AYSLGRAEYG RLGLGEGAEE KSIPTLISRL PAVSSVACGA SVGYAVTKDG 401 450 ENSP00000362937/1-452 RVFAWGMGTN YQLGTGQDED AWSPVEMMGK QLENRVVLSV SSGGQHTVLL ENSTTRP00000001743/1-445 RVFAWGMGTN YQLGTGQEED VWSPVEMTGK QLENRVVLSV SSGGQHTVLL ENSBTAP00000032002/1-422 RVFAWGMGTN YQLGTGQDED AWSPVEMTGK QLENRVVLTV SSGGQHTVLL bmy_08012T0/1-405 RVFAWGMGTN YQLGTGQEED AWSPVEMTGK QLENRVVLSV SSGGQHTVLL BACU003264/1-421 RVFAWGMGTN YQLGTGQEED AWSPVEMTGK QLENRVVLSV SSGGQHTVLL 451 500 ENSP00000362937/1-452 VKDKEQS- ENSTTRP00000001743/1-445 VKDKEQS- ENSBTAP00000032002/1-422 VKDKEQSW bmy_08012T0/1-405 VKDKEQS- BACU003264/1-421 VKDKEQS-