KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:41:42 2014 Check: 00 .. Name: ENSTTRP00000003688/1-217 Len: 310 Check: 1309 Weight: 1.00 Name: ENSBTAP00000032029/1-233 Len: 310 Check: 2342 Weight: 1.00 Name: ENSP00000262637/1-251 Len: 310 Check: 7660 Weight: 1.00 Name: bmy_05919T0/1-216 Len: 310 Check: 9638 Weight: 1.00 Name: BACU000620/1-156 Len: 310 Check: 2026 Weight: 1.00 // 1 50 ENSTTRP00000003688/1-217 TSPPFPPGIV LLGLRSDSRW RKPLCGGGFP VVMPRAFLVR SRRPQPPNWG ENSBTAP00000032029/1-233 ---------- ---------- ---------- --MPRAFLVR SRRPQPPNWD ENSP00000262637/1-251 ---------- ---------- ---------- --MPRAFLVR SRRPQPPNWG bmy_05919T0/1-216 ---------- ---------- ---------- --MPRAFLVR SRRPQPPDWG BACU000620/1-156 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000003688/1-217 HLPDQLRGHA YVPG-GPLTG ---------P RGE------- ---------- ENSBTAP00000032029/1-233 HLPDQLRGDA YVPG-GPLSG PGDCSNLGGP PAHRTSGLGD SWAASSGLIV ENSP00000262637/1-251 HLPDQLRGDA YIPDCSSLGG ---------P PAQQSSSVRD PWTAVSVLGT bmy_05919T0/1-216 HLPDHLRGDA YVPG-GPLTG ---------P RGE------- ---------- BACU000620/1-156 ---------- -------MAG ---------P KAE------- ---------- 101 150 ENSTTRP00000003688/1-217 ---------- ---------- ------GQGR HSI------- ---------- ENSBTAP00000032029/1-233 RPSPKHCV-- ---------- ---------S RDSVPSGAEE QIQA--HKCT ENSP00000262637/1-251 CPPLLLCVGN ASPFLVAPGP AATGISSSGA QDSSPHVDDP LYLCMHWRKE bmy_05919T0/1-216 ---------- ---------- ------GQGR HKASPSGFSP QTAA----AW BACU000620/1-156 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000003688/1-217 ---------- TIWLLSSDCS SLGVPLTHQS SGLRDSWAAR MLTRHLKCHS ENSBTAP00000032029/1-233 SFHPVEPSQG TLTATPSSPR TLGCPLCPKT FPLQ-----R MLTRHLKCHS ENSP00000262637/1-251 SASRNQPTQG NLTSAPRGPG TLGCPLCPKA FPLQ-----R MLTRHLKCHS bmy_05919T0/1-216 GGHRHTSLLA SGTLGQRGPG TLGCPLCPKA FPLQ-----R MLTRHLKCHS BACU000620/1-156 ------PSQG TLTATPRGPG TLGCPLCPKA FPLQ-----R MLTRHLKCHS 201 250 ENSTTRP00000003688/1-217 PAHHHVCHCC GKGFHDASDL KQHMRTHTGI WPFRCGACGK AFTQRCSLEV ENSBTAP00000032029/1-233 PARRHVCHCC GKGFHDAFDL KRHMRTHTGI RPFRCGACGK AFTQRCSLEA ENSP00000262637/1-251 PVRRHLCRCC GKGFHDAFDL KRHMRTHTGI RPFRCSACGK AFTQRCSLEA bmy_05919T0/1-216 PARRHVCHCC GKGFHNAFDL KRHMRTHTGI RPFRCGACGK AFTQRCSLEV BACU000620/1-156 PARRHVCHCC GKGFHNTFDL KRHMRTHTGI RPFRCGACGK AFTQRCSLEL 251 300 ENSTTRP00000003688/1-217 HLAKALGQLA SYAYRECREK LHVCEDCGFT SSRPDAYAQH RTLHHAA--- ENSBTAP00000032029/1-233 HLAKVHGQPA SYAYRERREK LHVCEDCGFT SSQPDAFARH RALH------ ENSP00000262637/1-251 HLAKVHGQPA SYAYRERREK LHVCEDCGFT SSRPDTYAQH RALHRAA--- bmy_05919T0/1-216 HLDKVHGQPA SYAYRERREK LHVCEECGFT SSRPDAYVQH RALHCAASDW BACU000620/1-156 HLANVHGQPA SYAYRERREK LHVCEDCGFT SSRPDAYVQH RALHCAASDW 301 350 ENSTTRP00000003688/1-217 ---------- ENSBTAP00000032029/1-233 ---------- ENSP00000262637/1-251 ---------- bmy_05919T0/1-216 EPRVQPMRGK BACU000620/1-156 EPRVQPMRGK