KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:41:45 2014 Check: 00 .. Name: ENSP00000359305/1-229 Len: 229 Check: 5552 Weight: 1.00 Name: ENSBTAP00000032097/1-226 Len: 229 Check: 6251 Weight: 1.00 Name: bmy_05410T0/1-187 Len: 229 Check: 9786 Weight: 1.00 Name: BACU002807/1-226 Len: 229 Check: 6395 Weight: 1.00 Name: ENSTTRP00000006591/1-133 Len: 229 Check: 485 Weight: 1.00 // 1 50 ENSP00000359305/1-229 MGDKIWLPFP VLLLAALPPV LLPGAAGFTP SLDSDFTFTL PAGQKECFYQ ENSBTAP00000032097/1-226 MGDKTWLPFP VVLLAAL--- LLPRAAGFTP SLDSDFTFTL PAGQKECFYQ bmy_05410T0/1-187 MGDKIWLPFP VVLLASL--- LLPGAVGFTP SLDSDFTFTL PAGQKECFYQ BACU002807/1-226 MGDKIWLPFP VVLLASL--- LLPGAVGFTP SLDSDFTFTL PAGQKECFYQ ENSTTRP00000006591/1-133 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000359305/1-229 PMPLKASLEI EYQVLDGAGL DIDFHLASPE GKTLVFEQRK SDGVHTVETE ENSBTAP00000032097/1-226 PMPLKASLEI EYQVLDGAGL DIDFHLASPE GKTLVFEQRK SDGVHTIETE bmy_05410T0/1-187 PMPLKASLEI EYQVLDGAGL DIDFHLASPK GRTLVFEQRK SDGVHTIETE BACU002807/1-226 PMPLKASLEI EYQVLDGAGL DIDFHLASPK GRTLVFEQRK SDGVHTIETE ENSTTRP00000006591/1-133 ---------- ---------- ---------- ---------- ------IETE 101 150 ENSP00000359305/1-229 VGDYMFCFDN TFSTISEKVI FFELILDNMG EQAQEQEDWK KYITGTDILD ENSBTAP00000032097/1-226 VGDYMFCFDN TFSTISEKVI FFELILDNMG EQEQEQEDWK KYITGTDMLD bmy_05410T0/1-187 GGDYMFCFDN TFSTISEK-- ---------- ---------- ---------- BACU002807/1-226 GGDYMFCFDN TFSTISEKVI FFELILDNMG EQEQEQEDWK KYITGTDMLD ENSTTRP00000006591/1-133 GGDYMFCFDN TFSTISEKVI FFELILDNMG EQEQEQEDWK KYITGTDMLD 151 200 ENSP00000359305/1-229 MKLEDILESI NSIKSRLSKS GHIQTLLRAF EARDRNIQES NFDRVNFWSM ENSBTAP00000032097/1-226 MKLEDILESI NSIKSRLSKS GHIQTLLRAF EARDRNIQES NFDRVNFWSM bmy_05410T0/1-187 -------ESI NSIKSRLSKS GHIQTLLRAF EARDRNIQES NFDRVNFWSM BACU002807/1-226 MKLEDILESI NSIKSRLSKS GHIQTLLRAF EARDRNIQES NFDRVNFWSM ENSTTRP00000006591/1-133 MKLEDILESI NSIKSRLSKS GHIQTLLRAF EARDRNIQES NFDRVNFWSM 201 250 ENSP00000359305/1-229 VNLVVMVVVS AIQVYMLKSL FEDKRKSRT ENSBTAP00000032097/1-226 VNLVVMVVVS AIQVYMLKSL FEDKRKSRT bmy_05410T0/1-187 VNLVVMVVVS AIQVYTLKSL FEDKRKSRT BACU002807/1-226 VNLVVMVVVS AIQVYMLKSL FEDKRKSRT ENSTTRP00000006591/1-133 VNLVVMVVVS AIQVYMLKSL FEDKRKSRT