KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:41:45 2014 Check: 00 .. Name: ENSP00000263372/1-313 Len: 313 Check: 9188 Weight: 1.00 Name: ENSBTAP00000032119/1-312 Len: 313 Check: 212 Weight: 1.00 Name: BACU008347/1-277 Len: 313 Check: 3904 Weight: 1.00 Name: bmy_13258T0/1-312 Len: 313 Check: 6792 Weight: 1.00 Name: ENSTTRP00000009192/1-313 Len: 313 Check: 9967 Weight: 1.00 // 1 50 ENSP00000263372/1-313 MRRGALLAGA LAAYAAYLVL GALLVARLEG PHEARLRAEL ETLRAQLLQR ENSBTAP00000032119/1-312 MRRGALLAGA LAVYIAYLVL GALLVARLEG PHEARLRAEL RMLRQQLLRR BACU008347/1-277 MRRGALLAGA LAAYIAYLVL GALLVARLER PHEDRLRAEL QTLRQQLLQR bmy_13258T0/1-312 MRRGALLAGA LAAYIAYLVL GALLVARLER PHEDRLRAEL QTLRQKLLQR ENSTTRP00000009192/1-313 MRRGALLAGA LAAYIAYLVL GALLVARLER PHEDRLRAEL QTLRQQLLQR 51 100 ENSP00000263372/1-313 SPCVAAPALD AFVERVLAAG RLGRVVLANA SGSANASDPA WDFASALFFA ENSBTAP00000032119/1-312 SPCVAAPALD AFVERVLAAG RLGRAALANA SGSANASDPA WDFASALFFA BACU008347/1-277 SPCVAAPALD AFVERMLAAG RLGRAALANA SGSANASDPA WDFASALFFA bmy_13258T0/1-312 SPCVAAPALD AFVERMLAAG RLGRAALANA SGSANASDPA WDFASALFFA ENSTTRP00000009192/1-313 SPCVAAPALD AFVERMLAAG RLGRAALANA SGSANASDPA WDFASALFFA 101 150 ENSP00000263372/1-313 STLITTVGYG YTTPLTDAGK AFSIAFALLG VPTTMLLLTA SAQRLSLLLT ENSBTAP00000032119/1-312 STLVTTVGYG YTTPLTDGGK AFSIAFALLG VPVTMLLLTA SAQRLSLLLT BACU008347/1-277 STLVTTVDHS PAR------- ---------- --GPALLLTK DHPD-----P bmy_13258T0/1-312 STLVTTVGYG HTTPLTDGGK AFCIAFALLG VPATMLLLTA SAQRLS-LLT ENSTTRP00000009192/1-313 STLVTTVGYG YTTPLTDGGK AFSIAFALLG VPATMLLLTA SAQRLSLLLS 151 200 ENSP00000263372/1-313 HVPLSWLSMR WGWDPRRAAC WHLVALLGVV VTVCFLVPAV IFAHLEEAWS ENSBTAP00000032119/1-312 HTPLSWVSQR WGCTPRKAAR WHLAILLGVT VTVCFLVPAA IFAHLEEAWS BACU008347/1-277 HTPL------ ------QVAR WHLAALLAVV VTICFLVPAA VFAHLEEAWS bmy_13258T0/1-312 HAPLSWLSRR WGCHPPQAAR WHLGALLAVV VTICFLVPAA VFAHLEEAWS ENSTTRP00000009192/1-313 HAPLSWLSRR WGCHPPQAAR WHLAVLLGVV VTICFLVPAA VFAHLEEAWS 201 250 ENSP00000263372/1-313 FLDAFYFCFI SLSTIGLGDY VPGEAPGQPY RALYKVLVTV YLFLGLVAMV ENSBTAP00000032119/1-312 FLDAFYFCFI SLSTIGLGDY VPGEAPGQPY RAVYKLLVTV YLFLGLVAMV BACU008347/1-277 FLDAFYFCFI SLSTIGLGDY VPGEAPGQPY RALYKVLVTV YLFLGLVAMV bmy_13258T0/1-312 FLDAFYFCFI SLSTIGLGDY VPGEAPGQPY RALYKVLVTV YLFLGLVAMV ENSTTRP00000009192/1-313 FLDAFYFCFI SLSTIGLGDY VPGEAPGQPY RALYKVLVTV YLFLGLVAMV 251 300 ENSP00000263372/1-313 LVLQTFRHVS DLHGLTELIL LPPPCPASFN ADEDDRVDIL GPQPESHQQL ENSBTAP00000032119/1-312 LLVQTFRRVS DLHGLTELIL LPTPCPTSFA EE-DDRVDIL SPEPEPHQQL BACU008347/1-277 LVLQTFRRLS DLHGLTELIL LPSPCPASVD EDGDDRVDIL GPQPEPHQQL bmy_13258T0/1-312 LVLQTFRRVS DLHGLTELIL LPSPCPTSFD EDGDDQVDIL GPQPEPHQQF ENSTTRP00000009192/1-313 LVLQTFRRVS DLHGLTELIL LPNPCPTSFN EDGDDRVDIL GRQPEPHQQF 301 350 ENSP00000263372/1-313 SASSHTDYAS IPR ENSBTAP00000032119/1-312 TAGSHVDYAS IPR BACU008347/1-277 AAGVHADYAS IPR bmy_13258T0/1-312 TAGLHTDYAS IPR ENSTTRP00000009192/1-313 AADLHPDYAS IPR