KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:41:46 2014 Check: 00 .. Name: ENSTTRP00000010663/1-438 Len: 443 Check: 5699 Weight: 1.00 Name: ENSP00000380793/1-438 Len: 443 Check: 1066 Weight: 1.00 Name: ENSBTAP00000032149/1-438 Len: 443 Check: 1340 Weight: 1.00 Name: bmy_10424T0/1-396 Len: 443 Check: 5943 Weight: 1.00 Name: BACU016573/1-443 Len: 443 Check: 4506 Weight: 1.00 // 1 50 ENSTTRP00000010663/1-438 MAAGLRKRGR AGPAARAMGL CGQWLRRAWQ ERRLLLLEPR YTLKVAACLC ENSP00000380793/1-438 MAAGLRKRGR SGSAAQAEGL CKQWLQRAWQ ERRLLLREPR YTLLVAACLC ENSBTAP00000032149/1-438 MAAGLRKRGR AGPATRAAGL CGQWLRRAWQ ERRLLLLEPR YTLLVAACLC bmy_10424T0/1-396 MAAGLRKRGR AGPAARAVGL CGQWLRRAWQ ERRLLLLEPR YTLLVAACLC BACU016573/1-443 MAAGLRKRGR AGPAARAVGL CGQWLRRAWQ ERRLLLLEPR YTLLVAACLC 51 100 ENSTTRP00000010663/1-438 LAEVGITFWV IHRVAXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000380793/1-438 LAEVGITFWV IHRVAYTEID WKAYMAEVEG VINGTYDYTQ LQGDTGPLVY ENSBTAP00000032149/1-438 LAEVGITFWV IHRVAYTEID WKAYMAEVEG VINGTYDYTQ LQGDTGPLVY bmy_10424T0/1-396 LAEVGITFWV IHRVAYTEID WKAYMAEVEG VINGTYDYTQ LRGDTGPLVY BACU016573/1-443 LAEVGITFWV IHRVAYTEID WKAYMAEVEG VINGTYDYTQ LRGDTGPLVY 101 150 ENSTTRP00000010663/1-438 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000380793/1-438 PAGFVYIFMG LYYATSRGTD IRMAQNIFAV LYLATLLLVF LIYHQTCKVP ENSBTAP00000032149/1-438 PAGFVYIFMG LYYATDRGAD IRMAQHIFAV LYLATLLLVF LIYHQTCKVP bmy_10424T0/1-396 PAGFVYIFMG LYYATGRGTD IRMAQHIFAV LYLATLLLVF LIYHQTCKVP BACU016573/1-443 PAGFVYIFMG LYYATGQGTD IRMAQHIFAV LYLATLLLVF LIYHQTCKVP 151 200 ENSTTRP00000010663/1-438 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000380793/1-438 PFVFFFMCCA SYRVHSIFVL RLFNDPVAMV LLFLSINLLL AQRWGWGCCF ENSBTAP00000032149/1-438 PFVFFFMCCA SYRVHSIFVL RLFNDPVAMV LLFLSVNLLL AQRWSWGCCC bmy_10424T0/1-396 PFVFFFMCCA SYRVHSIFVL RLFNDPVAMV LLFLSINLLL AQRWSWGCCC BACU016573/1-443 PFVFFFMCCA SYRVHSIFVL RLFNDPVAMV LLFLSINLLL AQRWSWGCCC 201 250 ENSTTRP00000010663/1-438 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXVVLGLPFL ENSP00000380793/1-438 FSLAVSVKMN VLLFAPGLLF LLLTQFGFRG ALPKLGICAG LQVVLGLPFL ENSBTAP00000032149/1-438 FSLAVSVKMS VLLFAPGLLF LLLTKFGLRG ALPKLGICAV LQVVLGLPFL bmy_10424T0/1-396 FSLAVSVKMN VLLFAPGLLF LLLTQFGLRG ALPKLGICAV LQVVLGLPFL BACU016573/1-443 FSLAVSVKMN VLLFAPGLLF LLLTQFGLRG ALPKLGICAV LQVVLGLPFL 251 300 ENSTTRP00000010663/1-438 LENPVGYVSR SFDLGRQFLF RWTVNWRFLP EALFLHRAFH LALLTAHLTL ENSP00000380793/1-438 LENPSGYLSR SFDLGRQFLF HWTVNWRFLP EALFLHRAFH LALLTAHLTL ENSBTAP00000032149/1-438 LKNPVGYLSR SFDLGRQFLF RWTVNWRFLP EALFLHRAFH LALLTAHLTV bmy_10424T0/1-396 LENPVGYVSR SFDLGRQFLF CWTVNWRFLP EALFLHRAFH LALLTAHLTL BACU016573/1-443 LENPVGYVSR SFDLGRQFLF CWTVNWRFLP EALFLHRAFH LALLTAHLTL 301 350 ENSTTRP00000010663/1-438 LLLFALCRWH R-----TGES ILSLLKDPSK RKFPLQPLTP NHIVSALFTS ENSP00000380793/1-438 LLLFALCRWH R-----TGES ILSLLRDPSK RKVPPQPLTP NQIVSTLFTS ENSBTAP00000032149/1-438 LLLFALCRWH R-----TGEG ILSLLKDPSK RKVPPQPLTP NQIVSTLFTS bmy_10424T0/1-396 LLLFALCRWH ---------- ---------- ---------- ---------- BACU016573/1-443 LLLFALCRWH RRKYPVTAEG SLQKEGSTPA PHTQPYPLNH GKIVSALFTS 351 400 ENSTTRP00000010663/1-438 NFIGICFSRS LHYQFYVWYF HTLPYLLWAT PARWLTHLLR LLVLGLIELS ENSP00000380793/1-438 NFIGICFSRS LHYQFYVWYF HTLPYLLWAM PARWLTHLLR LLVLGLIELS ENSBTAP00000032149/1-438 NFIGICFSRS LHYQFYVWYF HTLPYLLWAT PARWLTHLLR LLVLGLIELS bmy_10424T0/1-396 -------SRS LHYQFYVWYF HTLPYLLWAT PARWLTHLLR LLVLGLIELS BACU016573/1-443 NFIGICFSRS LHYQFYVWYF HTLPYLLWAT PARWLTHLLR LLVLGLIELS 401 450 ENSTTRP00000010663/1-438 WNTYPSTSCS SGALHMCHAV ILLQLWLGPQ PFPKIIQHSK KAH ENSP00000380793/1-438 WNTYPSTSCS SAALHICHAV ILLQLWLGPQ PFPKSTQHSK KAH ENSBTAP00000032149/1-438 WNTYPSTSCS SAALHACHAV ILLQLWLGPQ PFPKTIPHSK KAH bmy_10424T0/1-396 WNTYPSTSCS SGALHVCHAV ILLQLWLGPQ PFPKTIQHSK KAH BACU016573/1-443 WNTYPSTSCS SGALHMCHAV ILLQLWLGPQ PFPKTIQYSK KAH