KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:41:48 2014 Check: 00 .. Name: ENSP00000430242/1-590 Len: 656 Check: 5510 Weight: 1.00 Name: ENSBTAP00000032173/1-557 Len: 656 Check: 2343 Weight: 1.00 Name: ENSTTRP00000014346/1-249 Len: 656 Check: 4305 Weight: 1.00 Name: bmy_12282T0/1-375 Len: 656 Check: 7640 Weight: 1.00 Name: BACU000597/1-207 Len: 656 Check: 6330 Weight: 1.00 // 1 50 ENSP00000430242/1-590 MHLARLVGSC SLLLLLGALS GWAASDDPIE KVIEGINRGL SNAEREVGKA ENSBTAP00000032173/1-557 MHLASLLSSC SLLLLLGALP GWAANNDPIE KVIEGINRGL SSAEREVGKA ENSTTRP00000014346/1-249 MHLASLLSSC FLLLLLGPLP GWAAGADPVK KVTEGISKGL SNTEREVGKA bmy_12282T0/1-375 MHLASLLSSC SLLLLLGPLP GWEANAEPVK KVTEGISQGL SNAEREVGKA BACU000597/1-207 MHLASLLSSC SLLLLLGPLP GWAANAEPVK KVTEGISQGL SNAEREVGKA 51 100 ENSP00000430242/1-590 LDGINSGITH AGREVEKVFN GLSNMGSHTG KELDKGVQGL NHGMDKVAHE ENSBTAP00000032173/1-557 LEGINNGITQ AGREVEKVFN GLSSMGNQAG KELEKGVQGL NRGLDKVAHG ENSTTRP00000014346/1-249 LEGINNGIPQ AGR--DKDFS GLNSVGSQAG KELDKGVQGL NHNLDKVTHG bmy_12282T0/1-375 LEGINNGIPQ AGR--EKVFN GLNSVGSQAG KELDKGIQGL NHSLDKVAHG BACU000597/1-207 LEGINNGIPQ AGR--EKVFN GLNSVGSQAG KELDKGVQGL NHSPDKVAHG 101 150 ENSP00000430242/1-590 INHGIGQAGK EAEKLGHGVN NAAGQVGKEA DKLIHHGVHH GANQAGSEAG ENSBTAP00000032173/1-557 INNGVGHTGK EAEKLAHGVN HAAGQVGKEA DTVI-QGVPH GVNQAGSDAG ENSTTRP00000014346/1-249 INNVAGQAGK GAEKFVPGVN SATGQ----- ---------- ---------- bmy_12282T0/1-375 INNVTGQAGK GAEKFVHGVN NGTRQVGKEA NKVI------ ---------- BACU000597/1-207 INNVTGQAGK GAEKFVHGVN NATRQ----- ---------- ---------- 151 200 ENSP00000430242/1-590 KFGQGVDNAA GQAGNEAGRF GQGVHHAAGQ AGNEAGRFGQ GVHHAAGQAG ENSBTAP00000032173/1-557 RFGQGAHHAT GQAGKEAEKF GQGAHHAAGQ FGNEAEKFGQ GAHHAAGQFG ENSTTRP00000014346/1-249 ---------- ---------- ---------- ---------- ---------- bmy_12282T0/1-375 ---------- ---------- ---------- ---------- ---------- BACU000597/1-207 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000430242/1-590 NEAGRFGQGA HHGLSEGWKE TEKFGQGIHH AAGQVGKEAE KFGQGAHHAA ENSBTAP00000032173/1-557 NEA------- ---------- -EKFGQGVHH AAGQFGNEAE KFGQGVHHAA ENSTTRP00000014346/1-249 ---------- ---------- ---------- ---------- ---------- bmy_12282T0/1-375 ---------- ---------- ---------- ---------- ---------- BACU000597/1-207 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000430242/1-590 GQAGNEAGRF GQGVHHGLSE GWKETEKFGQ GVHHTAGQVG KEAEKFGQGA ENSBTAP00000032173/1-557 GQAGKEGEKI VQGVQHGVNQ AGKEAEKFGQ GVHHGAGQFG NEAEKFGQGV ENSTTRP00000014346/1-249 ---------- ---------- ---------- ---------- ---------- bmy_12282T0/1-375 ---------- ---------- ---------- ---------- ---------- BACU000597/1-207 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000430242/1-590 HHAAGQAGNE AGRFGQGAHH AAGQAGNEAG RFGQGVHHGL SEGWKETEKF ENSBTAP00000032173/1-557 HHAAGQAGKE GEKIVQGVQH GVNQAGKEAE KFGQGVHHGA GQFGNEAEKF ENSTTRP00000014346/1-249 ---------- ---------- ---------- ---------- ---------- bmy_12282T0/1-375 ---------- ---------- ---------- ---------- ---------- BACU000597/1-207 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000430242/1-590 GQGVHHAASQ FGKETEKLGH GVHHGVNEAW KEAEKFGQGV HHAASQVGKE ENSBTAP00000032173/1-557 GQGVHHAAGQ AGKEGEKIVQ GVQHGVNQAG KEAEKFGKDV HYAAGQAGKE ENSTTRP00000014346/1-249 ---------- ---------- ---------- ---------- ------AGKE bmy_12282T0/1-375 -QGVHHA--- -GKEGVKIVQ GVHHGVNQSG KEVEKFGQGV HHAAGQAGKD BACU000597/1-207 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000430242/1-590 EDRVVQGLHH GVSQAGREAG QFGHDIHHTA GQAGKEGDIA VHGVQPGVHE ENSBTAP00000032173/1-557 GEKIVQGVQH GVNQAGKEAE KFGQGVHHAA GQ-------- ---------- ENSTTRP00000014346/1-249 GEKIVQGVHH GVNQA----- ---------- ---------- ---------- bmy_12282T0/1-375 GEKIVQGVHH GVNQA----- ---------- ---------- ---------- BACU000597/1-207 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000430242/1-590 AGKEAGQFGQ GVHHTLEQAG KEADKAVQGF HTGVHQAGKE AEKLGQGVNH ENSBTAP00000032173/1-557 FGKEAEKFGQ GAHHAAEQAG KQAGKVAQGV HDGVNQAGKE AEKLGHGVNH ENSTTRP00000014346/1-249 -GKEVGKFGQ ---------- ---------- ---------- ------GVSH bmy_12282T0/1-375 -GKEVEKFGQ GTHHAAEQAG KEAGKVVQGV HDGVNQAGKE AEKFGHGVSH BACU000597/1-207 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000430242/1-590 AADQAGKEVE KLGQGAHHAA GQAGKE---- LQNAHNGVNQ ASKEANQLLN ENSBTAP00000032173/1-557 AAGQAGKEAE KLGQGVHHAA GQAGKQEDRL QQNVHNGVNQ AGKEANQLLN ENSTTRP00000014346/1-249 AAGQAGKEVE KLGQGVPHAA GEAGKEEDGL HQTVHDGTNQ AGKEANQLLN bmy_12282T0/1-375 AAGQAGKEVE KLGQGVHHAA GQAGKEEDGL QQTVHTGTNQ DGKEANKLLN BACU000597/1-207 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000430242/1-590 GNHQSGSSSH QGGATTTPLA SGASVNTPFI NLPALWRSVA NIMP------ ENSBTAP00000032173/1-557 DGHPGGSTTQ HGGAATTTLT SGASVNKPFM ALSVLWKSVT SIIP------ ENSTTRP00000014346/1-249 GSPQGRFNHQ NGGGATTTLT SGDLVNKPFI DLSVLWKSLT NIIL------ bmy_12282T0/1-375 ---------- ---------- --ALVNKPFI GLSVLWKVSA HVVSTSYLGD BACU000597/1-207 ---------- ---------- --ALVNKPFI DLSVLWKVSA HVVSTSYLGD 601 650 ENSP00000430242/1-590 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000032173/1-557 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014346/1-249 ---------- ---------- ---------- ---------- ---------- bmy_12282T0/1-375 ALTSSSRCLF TDDCTVDRHS ASVDTIQPIF QLWFSFPHCS LPFASCFHLL BACU000597/1-207 ALTSSSRCLF TDNCTVDRHS ASADTIQLIF QLWFSFPHCS LPFTSCFHLL 651 700 ENSP00000430242/1-590 ------ ENSBTAP00000032173/1-557 ------ ENSTTRP00000014346/1-249 ------ bmy_12282T0/1-375 GAFRSH BACU000597/1-207 GAFRSH