KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 4 Type: P Thu May 15 17:41:48 2014 Check: 00 ..
Name: bmy_07309T0/1-329 Len: 342 Check: 9855 Weight: 1.00
Name: ENSBTAP00000032180/1-333 Len: 342 Check: 9945 Weight: 1.00
Name: BACU016513/1-335 Len: 342 Check: 9708 Weight: 1.00
Name: ENSTTRP00000002459/1-335 Len: 342 Check: 25 Weight: 1.00
//
1 50
bmy_07309T0/1-329 MQSEAADTVC YEYQVKRIYY VQGKELNEDL IVSCSQANIA RDTEKTKLPI
ENSBTAP00000032180/1-333 -----QNTL- --LPCQDQYF VGGQSYNCPY SATTSESSVD VSTE-TWVSF
BACU016513/1-335 ---ILQNTV- --LPCQDQYF VGGQSYNCPY SGTTSESSVD VSTE-TWVSF
ENSTTRP00000002459/1-335 ---ILQNTV- --LPCQDQYF VGGQSYNCPY SGTTSESSVD VSTE-TWVSF
51 100
bmy_07309T0/1-329 WCFHI----- --------ES SSDSNFPVLN SCSWEEAQLS SQLYRNKQLQ
ENSBTAP00000032180/1-333 WAAGLLDNRE PQQAPQAQEP SGDSNFPVPN LCSWEEAQLS SQLYRNKQLQ
BACU016513/1-335 WAAGLLDNRE PQQAPQAQES SSDSNFPVLN SCSWEEAQLS SQLYRNKQLQ
ENSTTRP00000002459/1-335 WAAGLLDNRE PQQAPQAQES SSDSNFPVLN SCSWEEAQLS SQLYRNKQLQ
101 150
bmy_07309T0/1-329 DTLVQKEEEL ARLHEENNHL RQYLNSALVK CLEEKAKKLL SSDGFSKACG
ENSBTAP00000032180/1-333 DTLVQKEEEL ARLHEENNHL RQYLNSALVK CLEEKAKKLL SSDEFSKACR
BACU016513/1-335 DTLVQKEEEL ARLHEENNHL RQYLNSALVK CLEEKAKKLL SSDGFSKACG
ENSTTRP00000002459/1-335 DTLVQKEEEL ARLHEENNHL RQYLNSALVK CLEEKAKKLL SSDGFSKARG
151 200
bmy_07309T0/1-329 KFRKGKRKPK EQRYFPSEIP HHKNAKRNLS SEFANCEQPG PPVDPWVLRT
ENSBTAP00000032180/1-333 KFRKGKRKPK EQRYFPPEIP HHKNAKRSLA SEFANCGQHG PPVDPWVLQT
BACU016513/1-335 KFRKGKRKPK EQRYFPPEIP HHKNAKRNLS SEFANCEQPG PPVDPWVLRT
ENSTTRP00000002459/1-335 KFRKGKRKPK EQRYFPPEIP HHKNAKRNLS SEFANCEQPG PPVDPWVLQT
201 250
bmy_07309T0/1-329 LGLKDLNTID DTSSANYSAL SSHPRRTTST LPQFLDDAVD YSSASGEDLP
ENSBTAP00000032180/1-333 LGLKDLNTID DTSSANYSAL SSHARQTTST FPQFLDEAID YPNAPGEDLP
BACU016513/1-335 LGLKDLNTID DTSSANYSAL LSHPRRTTST LPQFLDDAVD YLSASREDLP
ENSTTRP00000002459/1-335 LGLKDLNTID DTSSANYSAL SSHPRRTTST FPQFLNDAVD YPSASGEDLP
251 300
bmy_07309T0/1-329 IDYGGDRTTP SHSTASHRED FHFLSQLSNP PGGLQTLPYY ASDVSPNKTE
ENSBTAP00000032180/1-333 IDYGGDRTTP LPGTANHSED FHFLSQLSNP PGGLQTLPYY TSDVSPNKTE
BACU016513/1-335 IDYGGDRTTP SHSTASHRED FHFLSQLSNP PGGLQTLPYY TSDVSPNKTE
ENSTTRP00000002459/1-335 IDYGGDRTTP SHSTASHRED FHFLSQLSNP PGGLQTLPYY TSDVSPNKTE
301 350
bmy_07309T0/1-329 MAFSTSLSPH CNVKTHSFHQ GQAFVRRDEE GGWKFTWVPK QS
ENSBTAP00000032180/1-333 MAFSTSLSPH CNVKTHSFHQ GQAFVRRDEE GGWKFTWVPK QS
BACU016513/1-335 MAFSTSLSPH CNVKTHSFHQ GQAFVRRDEE GGWKFTWVPK QS
ENSTTRP00000002459/1-335 MAFSTSLSPH CNVKTHSFHQ GQAFVRRDEE GGWKFTWVPK QS