KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:41:49 2014 Check: 00 .. Name: ENSP00000012049/1-382 Len: 383 Check: 2221 Weight: 1.00 Name: ENSBTAP00000032205/1-383 Len: 383 Check: 4045 Weight: 1.00 Name: ENSTTRP00000013553/1-383 Len: 383 Check: 8509 Weight: 1.00 Name: bmy_06568T0/1-321 Len: 383 Check: 7384 Weight: 1.00 Name: BACU002119/1-383 Len: 383 Check: 3968 Weight: 1.00 // 1 50 ENSP00000012049/1-382 MRSGGRGRPR LRLGERGLME PLLPPKRRLL PRVRLLP-LL LALAVGSAFY ENSBTAP00000032205/1-383 MPSGGRGRPR LQVGERSLLE RPSPPKRRLI PRAQLLPQLL LALTVASVFY ENSTTRP00000013553/1-383 MRSGGRGRPR LRLGERGLLE PPSPPKRRLL PRAQLLPLLL LALAVASVLY bmy_06568T0/1-321 MRSGGRGRPR LRLGERGLLE PPSPPKRRLL PRAQLLPLLL LALAVASVLY BACU002119/1-383 MRSGGRGRPR LRLGERGLLE PPSPPKPSLL PRAQLLPLLL LALAVASVLY 51 100 ENSP00000012049/1-382 TIWSGWHRRT EELPLGRELR VPLIGSLPEA RLRRVVGQLD PQRLWSTYLR ENSBTAP00000032205/1-383 TIWRIWHSQT EELPLGRELR GPLIGSLPEA RVRRVVGQLD PHRLWNTFLR ENSTTRP00000013553/1-383 TSWSGWHRQS EELPLGRELR GPSIGSLPEA GVRRVVGQLD PHRLWNNYLR bmy_06568T0/1-321 TIWSGWYQQT EELPLGRELR GPSIGSLPEA GVRRVVGQLD PHRLWNNYLR BACU002119/1-383 TIWSGWYQQT EELPLGRELR GPSIGSLPEA GVRRVVGQLD PHRLWNNYLR 101 150 ENSP00000012049/1-382 PLLVVRTPGS PGNLQVRKFL EATLRSLTAG WHVELDPFTA STPLGPVDFG ENSBTAP00000032205/1-383 PLLVVRTPGS PGNLQVRKFL EATLRTLSAG WHIELDSFTA STPVGPLDFS ENSTTRP00000013553/1-383 PLLVVRTPGS PGNLQVRKFL EATLRTLTAG WHVELDPFTA STPLGPLHFS bmy_06568T0/1-321 PLLVVRTPGS PGNLQVRKFL EATLRTLTAG WHVELDPFTA STPLGPLHFS BACU002119/1-383 PLLVVRTPGS PGNLQVRKFL EATLRTLTAG WHVELDPFTA STPLGPLHFS 151 200 ENSP00000012049/1-382 NVVATLDPRA ARHLTLACHY DSKLFPPGST PFVGATDSAV PCALLLELAQ ENSBTAP00000032205/1-383 NVVATLDPGA ARHLTLACHY DSKLFPSDSA PFVGATDSAV PCSLLLELAQ ENSTTRP00000013553/1-383 NVVATLDPRA ARHLTLACHY DSKLFPSGSA PFVGATDSAV PCALLLELAQ bmy_06568T0/1-321 NXVATLDPRA ARQLTLACHY DSKLFPSGSA PFIGATDSA- ---------- BACU002119/1-383 NVVATLDPRA ARHLTLACHY DSKLFPSGSA PFIGATDSAV PCALLLELAQ 201 250 ENSP00000012049/1-382 ALDLELSRAK KQAAPVTLQL LFLDGEEALK EWGPKDSLYG SRHLAQLMES ENSBTAP00000032205/1-383 ALDQELGKAK ERAAPMTLQL IFLDGEEALK QWGPKDSLYG SRHLAQLMES ENSTTRP00000013553/1-383 ALDLELARAK EQAAPVTLQL LFLDGEEALK EWGPQDSLYG SRHLAQLMES bmy_06568T0/1-321 ---------- --AAPVTLQL LFLDGEEALK EWGPKDSLYG SRHLAQLMES BACU002119/1-383 ALDLELARAK EQAAPVTLQL LFLDGEEALK EWGPKDSLYG SRHLAQLMES 251 300 ENSP00000012049/1-382 IPHSPGPTRI QAIELFMLLD LLGAPNPTFY SHFPRTVRWF HRLRSIEKRL ENSBTAP00000032205/1-383 TPHGLGSTRI QAIELFMLLD LLGAPNPTFY SHFPRTARWF HRLRSIEKRL ENSTTRP00000013553/1-383 APHSPGFTRI QAIDLFMLLD LLGAPNPTFY SHFPRTVRWF HRLRSIXXXX bmy_06568T0/1-321 APHGPGFTRI QAIDLFMLLD LLGAPNPTFY SHFPRTARWF HRLRSI---- BACU002119/1-383 APHGPGFTRI QAIDLFMLLD LLGAPNPTFY SHFPRTARWF HRLRSVEKRL 301 350 ENSP00000012049/1-382 HRLNLLQSHP QEVMYFQPGE PFGSVEDDHI PFLRRGVPVL HLISTPFPAV ENSBTAP00000032205/1-383 HRLNLLQSHP WEVMYFQTGE PPGSVEDDHI PFLRRGVPVL HLIATPFPSV ENSTTRP00000013553/1-383 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXVPVL HLISTPFPSV bmy_06568T0/1-321 ---------- ---------- ---------- -----GVPVL HLISTPFPSV BACU002119/1-383 HRLNLLQSHP WEVMYFQPGE PPGSVEDDHI PFLRRGVPVL HLISTPFPSV 351 400 ENSP00000012049/1-382 WHTPADTEVN LHPPTVHNLC RILAVFLAEY LGL ENSBTAP00000032205/1-383 WHTSDDSEAN LHPPTVHNLS RILAVFLAEY LGL ENSTTRP00000013553/1-383 WHTSDDSEAN LHPPTVHNLS RILAVFLAEY LGL bmy_06568T0/1-321 WHTSDDSEAN LHPPTVHNLS RILAVFLAEY LGL BACU002119/1-383 WHTSDDSEAN LHPPTVHNLS RILAVFLAEY LGL