KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:41:50 2014 Check: 00 .. Name: ENSP00000332049/1-329 Len: 343 Check: 3311 Weight: 1.00 Name: ENSBTAP00000032224/1-311 Len: 343 Check: 6816 Weight: 1.00 Name: ENSTTRP00000010925/1-330 Len: 343 Check: 6456 Weight: 1.00 Name: bmy_16366T0/1-316 Len: 343 Check: 6451 Weight: 1.00 Name: BACU006063/1-328 Len: 343 Check: 1139 Weight: 1.00 // 1 50 ENSP00000332049/1-329 MDPQCTMGLS NILFVMAFLL -------SGA APLKIQAYFN ETADLPCQFA ENSBTAP00000032224/1-311 MRFKCTMGLR NTLIVMALLL SVSTVPFSGA ASLKSHAFFN ETGELPCHFP ENSTTRP00000010925/1-330 -SPGHTMGLR NTLVVMALLL -------SGA ASLESQAFFN ETGDLPCHFP bmy_16366T0/1-316 ---------- --------MA -------RGA ASLESQAFFN ETGDLPCHFS BACU006063/1-328 ------MGLR NTLVVMALLL -------SGA ASLESQAFFN ETGDLPCHFP 51 100 ENSP00000332049/1-329 NSQNQSLSEL VVFWQDQENL VLNEVYLGKE KFDSVHSKYM GRTSFDSDSW ENSBTAP00000032224/1-311 NTQNLSLDEL VIFWQDQNKL VLYELFKGQE KPNNVNPKYI GRTSFDQDSW ENSTTRP00000010925/1-330 NSQNLSLDDL VIFWQDQNKL VLYELYRGQE KPHNVHPKYI GRTSFDQDSW bmy_16366T0/1-316 NSQNLSLDEL VIFWQDQNKL VLYELYRGQE KPHNVHPKYI GRTSFDQDNW BACU006063/1-328 NSENLSLDEL VIFWQDQNKL VLYELYRGQE KPHNVHPKYI GRTSFDQDNW 101 150 ENSP00000332049/1-329 TLRLHNLQIK DKGLYQCIIH HKKPTGMIRI HQMNSELSVL ANFSQPEIVP ENSBTAP00000032224/1-311 TLRLHNVQIK DTGSYQCFIH HRRSQGLVSI HQMSSDLIVL ANFSQPEIRL ENSTTRP00000010925/1-330 TLRLHNVQIK DKGSYQCFIH HKRPQGLMPT YHMSSDLSVL ANFSQPEINL bmy_16366T0/1-316 TLRLHNVQIK DKGSYQCFIH HKGPQGLVPI HQMSSDLSVL ANFSQPEINL BACU006063/1-328 TLRLHNVQIK DKGSYQCFIH YKGPQGLVSI YQMSSDLSVL ANFSQPEINL 151 200 ENSP00000332049/1-329 ISNITENV-Y INLTCSSIHG YPEPKKMSVL LRTKNSTIEY DGVMQKSQDN ENSBTAP00000032224/1-311 IANQTEKSNI INLTCSSIQG YPEPQRMYVS LNTTNSSSTY DAVMKKSQSN ENSTTRP00000010925/1-330 IPNQTENSNI INLTCSSTQG YPEPQRMYIL VKTKNSTTEY DTVMKKSQNN bmy_16366T0/1-316 IPNQTENSNI INLTCSSTQG YPEPQRMYIL LKTKNSTTEH DTVMKKSQNN BACU006063/1-328 IPNQTENSNI INLTCSSTQG YPEPQRMYIL LKTKNSTTEH DTVMKKSQNN 201 250 ENSP00000332049/1-329 VTELYDVSIS LSVSFPDVTS NMTIFCILET DKTR--LLSS PFSIELEDPQ ENSBTAP00000032224/1-311 ITELYNVSIS VSFPIPPET- NVTIFCALQL EPTK-IILSQ PYNIDAKSPV ENSTTRP00000010925/1-330 ITELYNISIS MSFSIPPET- NVSIFCVLQL EPTKTLLFSP PCNIDAKPPK bmy_16366T0/1-316 ITELYNVSIS MSFSIPPET- NVSIFCVLQL EPTKTLLFSP PCNIDAKPPV BACU006063/1-328 ITELYNVSIS MSFSIPPKT- NVSIFCVLQL EPTKTLLFSP PCNIDAKPPV 251 300 ENSP00000332049/1-329 PP---PDHIP WITAVLPT-V IICVMVFCLI LWKWKKKKRP RNSYKCGTNT ENSBTAP00000032224/1-311 PSPPVPDHIL WIAALLVT-V VVSGMVF-LT L-KKRKKKQP GPSNECEIIK ENSTTRP00000010925/1-330 PP---PDHIL WIAALLVTLV VVCGMVFFLT L-KKRKKPQA GPSKECETIK bmy_16366T0/1-316 PSPPVPDHIL WIAALLVTLV VVCGMVFFLT L-KKRKKKQP GPSKECETIK BACU006063/1-328 PSPPVPDHIL WIAALLVTLV VVCGMVFFLT L-KKRKKKRP GPSKECETIK 301 350 ENSP00000332049/1-329 MEREESEQTK KREKIHIPER SDEAQRVFKS SKTSSCDKSD TCF ENSBTAP00000032224/1-311 VEEKESEQTA KR-------- ---------- ---------T PRT ENSTTRP00000010925/1-330 LEGTESEQTE KRVELQEPER SDEAQCDINI SETASGDKSA PHF bmy_16366T0/1-316 VEGKESEQTE KRVELQEPER SDEAQRDINI SKTASGDKSA THF BACU006063/1-328 VEGKESEQTE KRVELQEPER SDEAQCDINI SKTASGDKSA THF