KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:41:51 2014 Check: 00 .. Name: ENSP00000365076/1-294 Len: 298 Check: 8334 Weight: 1.00 Name: ENSBTAP00000032258/1-297 Len: 298 Check: 1280 Weight: 1.00 Name: ENSTTRP00000013372/1-297 Len: 298 Check: 627 Weight: 1.00 Name: bmy_03149T0/1-266 Len: 298 Check: 5338 Weight: 1.00 Name: BACU015896/1-266 Len: 298 Check: 5320 Weight: 1.00 // 1 50 ENSP00000365076/1-294 MFLRRLGGWL PRPWGRRKPM RPDPPYPEPR RVDSSSENSG SDWDSAPETM ENSBTAP00000032258/1-297 MFLRRLGGWL PRPWGRRKST RPDLPTPEPR RMDSSSENSG SDWDSAPETM ENSTTRP00000013372/1-297 MFLRQLGGWL PRPWGRWKST RPDLPAPEPR RMDSSSENSG SDWDSAPETM bmy_03149T0/1-266 ---------- ---------- ---------- -MDSSSENSG SDWDSAPETM BACU015896/1-266 ---------- ---------- ---------- -MDSSSENSG SDWDSAPETM 51 100 ENSP00000365076/1-294 EDVGHPKTKD SGALRVSGAA SEPSKEEPQV EQLGSKRMDS LKWDQPISST ENSBTAP00000032258/1-297 GDLGSPKTQD SGAQRSSGAA PEPSR-EAQV EQLGYKRMDS LKWEKTASST ENSTTRP00000013372/1-297 GDLGPPKTKD SGAQRSSGAA PEPSR-ESQV EQLGCKKMDS LKWDETVSST bmy_03149T0/1-266 GDLGPPKTKD SGAQRSSGAA PEPSR-ESQV EQLGCKRMDS LKWDKTXSST BACU015896/1-266 GDLGPPKTKD SGAQRSSGAA PEPSR-ESQV EQLGCKRMDS LKWDKTVSST 101 150 ENSP00000365076/1-294 QESGRLEAGG ASPKLRWDHV DSGGTRRPGV SPEGGLSVPG PGAPLEKPGR ENSBTAP00000032258/1-297 QESGRPEAGE TIPKLGQDPV DSDGTGKRGG SPEEELSPSV AEAPVEKPGR ENSTTRP00000013372/1-297 QESGRLEAGE TILKPGWDPV DSGGTKKPGV SPEEGLSPPG LEAPAEKPGQ bmy_03149T0/1-266 QESGRLEAGE TIPKLGWDPV DSGSTRKPGV SPEEGLSPPG PEAPAEKPGQ BACU015896/1-266 QESGRLEAGE TIPKLGWDPV DSGSTRKPGV SPEEGLSPPG PEAPAEKPGQ 151 200 ENSP00000365076/1-294 REKLLGWLRG E----PGAPS RYLGGPEECL QISTNLTLHL LELLASALLA ENSBTAP00000032258/1-297 RQKLLGWLRG DTVGGAGAPH QYLGDPEECL QISTNLTLHL LELLASALLG ENSTTRP00000013372/1-297 RQKLLGWLRG ETGGGAGAPY QYLGDPEECL QISTNLTLHL LELLASALLG bmy_03149T0/1-266 RQKLLGWLRG ETGGGAGAPY QYLGDPEECL QISTNLTLHL LELLASALLG BACU015896/1-266 RQKLLGWLRG ETGGGAGAPY QYLGDPEECL QISTNLTLHL LELLASALLG 201 250 ENSP00000365076/1-294 LCSRPLRAAL DTLGLRGPLG LWLHGLLSFL AALHGLHAVL SLLTAHPLHF ENSBTAP00000032258/1-297 LCSRPLRAAL DALGLRGPLG LWLHGLLSFL AALHGLHAVL SLLTAHPLHF ENSTTRP00000013372/1-297 LCSRPLRAAL DALGLRGPLG LWLHGLLSFL AALHGLHAVL SLLTAHPLHF bmy_03149T0/1-266 LCSRPLRAAL DALGLRGPLG LWLHGLLSFL AALHGLHAVL SLLTAHPLHF BACU015896/1-266 LCSRPLRAAL DALGLRGPLG LWLHGLLSFL AALHGLHAVL SLLTAHPLHF 251 300 ENSP00000365076/1-294 ACLFGLLQAL VLAVSLREPN GDEAATDWES EGLEREGEEQ RGDPGKGL ENSBTAP00000032258/1-297 ACLFGLLQAL VLAVSLREPS GDEEATDLEG EKLGREGEEQ KGDPGKGL ENSTTRP00000013372/1-297 ACLFGLLQAL VLAVSLREPS GDGEATDLEG EKLGREGEEQ RGDPGKRL bmy_03149T0/1-266 ACLFGLLQAL VLAVSLREPS GDGEATDLEG EKLGREGEEQ RGDPGKRL BACU015896/1-266 ACLFGLLQAL VLAVSLREPS GDGEATDLEG EKLGREGEEQ RGDPGKRL