KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:41:53 2014 Check: 00 .. Name: ENSP00000463762/1-727 Len: 778 Check: 8555 Weight: 1.00 Name: ENSBTAP00000032300/1-773 Len: 778 Check: 3239 Weight: 1.00 Name: bmy_05297T0/1-426 Len: 778 Check: 2613 Weight: 1.00 Name: ENSTTRP00000008880/1-498 Len: 778 Check: 3958 Weight: 1.00 // 1 50 ENSP00000463762/1-727 ----MESEDT KKTQEMKTDL NLLLECLKYQ MDNAFSQKEA LVTIHSICQQ ENSBTAP00000032300/1-773 ----MESEDT KKIQEVKTDL NLLLECLKYQ MDNAFSQKEA LVTIHSICQQ bmy_05297T0/1-426 MQTSMESEDT KKIQEMKTDL NLLLECLKYQ MDNAFSQKEA LVTIHSICQQ ENSTTRP00000008880/1-498 ----MESEDT KKIQGMKTDL NLLLECLKYQ MDNAFSQKEA LVTIHSICQQ 51 100 ENSP00000463762/1-727 NSNASVYFRE IGGLMFVKNL AKSSEHSMVK EAALYTLGAI AEKNVYCQQT ENSBTAP00000032300/1-773 NSNAGLYFRE IGGLMFVKNL AKSSEHSMVK EAALYTLGAV AEQNVYCQQT bmy_05297T0/1-426 NSNASLYFRE IGGLMFVKNL AKSSEHSMVK EAALYTLGAV AEQNVYCQQT ENSTTRP00000008880/1-498 NSNAGLYFRE IGGLMFVKDL AKSSEHSMVK EAALYTLGAV AEQNFYCQQT 101 150 ENSP00000463762/1-727 LCTSELFEDL TWFLSN-DSN INLKRMSVYV ILVLVSNNRT GQTLVRETGC ENSBTAP00000032300/1-773 LCTSELFEDL TWFLSNSDSN TNLKRMSVYV ILVLVSNNRT GQTLVRETGC bmy_05297T0/1-426 LCTSELFEDL TWFLSNNDSN TNLKRMSVYV ILVLVSNNRT GQTLVREIGC ENSTTRP00000008880/1-498 LCTSELFEDL TWFLSNNDSN TNLKRMSVYV ILVLVSNNRT GQTLVRETGC 151 200 ENSP00000463762/1-727 ITVLSRLFRT VISKHELDLS DKNVFQSYQL WSSVCSTLCV CVNNPQNDEN ENSBTAP00000032300/1-773 ISVLSQLFKT VLSKYELNLS DESAFQSYQL WSSVCSTLCV CVNNPQNDEN bmy_05297T0/1-426 ISVLSQLFKT VLSKYELNLS DENVFQSYQL WSSVCSTLCV CVNNPQNDEN ENSTTRP00000008880/1-498 ISVLSQLFKT VLSKYELNLS DENVFQSYQL WSSVCSTLCV CVNNPQNDEN 201 250 ENSP00000463762/1-727 QMFCCSLFPH ANEWLKNCTT PEIIRPICSF IGLTLANNTY VQKYFVSVGG ENSBTAP00000032300/1-773 QMLCCSLFTH ANDWLINCMK AEIIRPICSF IGLTLANNTY VQKYFISVGG bmy_05297T0/1-426 QMLCSSLFPH ANDWLINCMK PEIIRPICSF IGLTLANNTY VQKYFISVGG ENSTTRP00000008880/1-498 QMLCSSLFPH ANDWLINCTK PEIIRPICSF IGLTLANNTY VQKYFISVGG 251 300 ENSP00000463762/1-727 LDVLSQVLMQ LESDSHETLS SAKLAVVVTK TVDACIADNP T-FGIVLSKY ENSBTAP00000032300/1-773 LDVLSQVLVQ LESDSHKTPF SAKLAVVVTK TVDACIADNR STFGVVLSKY bmy_05297T0/1-426 LDVLSQVLVQ LESDSHKTLS SAKLAVVVTK TVDACIADNP T-FGVVLSKY ENSTTRP00000008880/1-498 LDILSQVLVQ LESDSHKTLS SAKLAVVVTK TVDACIADNP T-FGVVLSKY 301 350 ENSP00000463762/1-727 HIVSKLLALL LHESLDSGEK FSIMLTLGHC TEDCEENQYD LFKNNGLPLM ENSBTAP00000032300/1-773 HIVSKLLALL LLDNLDSGEK FSVILTLGHC TEDCEENQYD FFKNNGLPLM bmy_05297T0/1-426 HIVSKLLALL LHESLDSGEK FSIILTVGHC TEDC------ ---------- ENSTTRP00000008880/1-498 HIVSKLLALL LHESLDSGEK FSIILTVGHC TEDC------ ---------- 351 400 ENSP00000463762/1-727 IQALTESQNE ELNKAATFVL HNCKKITEKL SLSLGEYPFD ENETQQLKDI ENSBTAP00000032300/1-773 IQALTESQSE ELNKAATFVL HNCKKITEKL SLSLEEYSFD KNE-EHLKDI bmy_05297T0/1-426 --VLTESQNE ELNKAATFVL HNCKKITEKL SLSLGEYSFD ENE-EQLKDV ENSTTRP00000008880/1-498 ---------- ---------- ------AEKL SLSLGEYSFD ENE-GQLKDI 401 450 ENSP00000463762/1-727 SVKENNLEEH WRKAKEILHR IEQLEREGNE ---EEIQREN YQDNISSMNI ENSBTAP00000032300/1-773 NMKEKNLEDY WKKAKEILHR IEELETEGNE NKYENIKGEN YKNNVSSVNI bmy_05297T0/1-426 HMKEKNLEDY WKKAKEILHR IEQLEREGNE ---------- -VGFFVSKNV ENSTTRP00000008880/1-498 NMKEKNLEDY WKKAKEILHR IEQLEREGNE ---ERVQREK YKDYVSSMNI 451 500 ENSP00000463762/1-727 SIQNTWKHLH ADRIGRGSKA EDEDKSHSRQ LQSYKSHGVM SKACTNDDQM ENSBTAP00000032300/1-773 NIQDTLKHLH ADSSGGVPKA EDKDKSQARK LHGSKSHKVM SKACTNDDQV bmy_05297T0/1-426 ELFSNIF--- ---------- ---------- ---------- ---------- ENSTTRP00000008880/1-498 NIQNTLKHLH ADSSGGGSKA EDRDKSQSRK LQSYKSHEVM SKACTNDDQM 501 550 ENSP00000463762/1-727 KTPLKSANPV HACYRESEQN KTLYKAKSSC NQNLHEETTF E-KNFVSQSS ENSBTAP00000032300/1-773 KMVLRSANPV NACYRESGQN KTLCTANSSC KQNLCEETTS EKKNFVSQSR bmy_05297T0/1-426 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008880/1-498 KTLLKSANPV NACYRESKQN KTLCKANSSC NQNLREETTF EKKNFVSQS- 551 600 ENSP00000463762/1-727 DHVFKHPVHI AKNIKQQLPV TDPFTLCSDI INKEVVSFLA TPSCSEMLTY ENSBTAP00000032300/1-773 DHIFKHPTPV AQNTKQHLPV TDPFTLCSDI INKEVISFLE TDSCSKMLRY bmy_05297T0/1-426 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008880/1-498 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000463762/1-727 RCSGCIAVEK SLNSRNFSKL LHSCPYQCDR HKVIVEAEDR YKSELRKSLI ENSBTAP00000032300/1-773 RCSGCIAVGK SLNSRNFSKL LHCCPYQCDR HKVIVEAEDR YKSELRKSLI bmy_05297T0/1-426 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008880/1-498 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000463762/1-727 CNKKILLTPR RRQRLSNEST TPGGI----- ---------- ---------- ENSBTAP00000032300/1-773 CNKKILLTPR RRRQLSSEST TPGRITILAL QNKSKQLSTL LVKAAHYSAA bmy_05297T0/1-426 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008880/1-498 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000463762/1-727 ---------- ------KKRR IRKNFTEEEV NYLFNGVKKM GNHWNSILWS ENSBTAP00000032300/1-773 ETFEELSTDV NFSLITEKRR IRKNFTKEEI NYLFNGVKKM GNHWNLILWS bmy_05297T0/1-426 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008880/1-498 ---------- ---------- ---------- ---------- ---------- 751 800 ENSP00000463762/1-727 FPFQQGRKAV DLAHKYHKLT KHPTCAAS ENSBTAP00000032300/1-773 FPFQQGRKAV DLAHKYHRLT KCPKHVAP bmy_05297T0/1-426 ---------- ---------- -------- ENSTTRP00000008880/1-498 ---------- ---------- --------